RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 OPA3Q9H6K4 179 aa10.59□□□□□ -0.71
LIMK1-201ENST00000336180 A0A0G2JNJ9 132 aa10.59□□□□□ -0.71
LIMK1-201ENST00000336180 SH2D1BO14796 132 aa10.59□□□□□ -0.71
LIMK1-201ENST00000336180 F12P00748 615 aaPredicted RBP10.59□□□□□ -0.71
LIMK1-201ENST00000336180 SMCO1Q147U7 214 aa10.59□□□□□ -0.71
LIMK1-201ENST00000336180 TGIF2LXQ8IUE1 241 aa10.59□□□□□ -0.71
LIMK1-201ENST00000336180 SAXO1Q8IYX7 474 aa10.59□□□□□ -0.71
LIMK1-201ENST00000336180 MUCL1Q96DR8 90 aa10.59□□□□□ -0.71
LIMK1-201ENST00000336180 OR2V2Q96R30 315 aa10.59□□□□□ -0.71
LIMK1-201ENST00000336180 PRRX2Q99811 253 aa10.59□□□□□ -0.71
LIMK1-201ENST00000336180 UNKLQ9H9P5 680 aaKnown RBP10.59□□□□□ -0.71
LIMK1-201ENST00000336180 Q9UFV3 132 aa10.59□□□□□ -0.71
LIMK1-201ENST00000336180 PCDHB10Q9UN67 800 aa10.59□□□□□ -0.71
LIMK1-201ENST00000336180 WASF3Q9UPY6 502 aa10.59□□□□□ -0.71
LIMK1-201ENST00000336180 POLDIP2Q9Y2S7 368 aa10.59□□□□□ -0.71
LIMK1-201ENST00000336180 FAM96BQ9Y3D0 163 aa10.59□□□□□ -0.71
LIMK1-201ENST00000336180 GFRA3O60609 400 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 PGLYRP1O75594 196 aaPredicted RBP10.58□□□□□ -0.72
LIMK1-201ENST00000336180 APOC3P02656 99 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 SPINK9Q5DT21 86 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 SAPCD1Q5SSQ6 148 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 LGI3Q8N145 548 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 ABHD14BQ96IU4 210 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 PKIBQ9C010 78 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 WFDC1Q9HC57 220 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 PLA2G2EQ9NZK7 142 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 GPR31O00270 319 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 CRYAAP02489 173 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 CD80P33681 288 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 EDDM3BP56851 147 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 ERVK11-1P61568 191 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 IL15RAQ13261 267 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 TBR1Q16650 682 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 BAP18Q8IXM2 172 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 ITLN1Q8WWA0 313 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 C14orf144Q96I85 54 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 SH3BGRL3Q9H299 93 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 DNAJB11Q9UBS4 358 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 CHTOPQ9Y3Y2 248 aaKnown RBP10.58□□□□□ -0.72
LIMK1-201ENST00000336180 MED13LQ71F56 2210 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 KIR2DS1A0A191URI9 304 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 ZNF705EA8MWA4 302 aaPredicted RBP10.58□□□□□ -0.72
LIMK1-201ENST00000336180 CCKARP32238 428 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 KIR2DS4P43632 304 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 CCL8P80075 99 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 KIR2DS1Q14954 304 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 ZNF324BQ6AW86 544 aaPredicted RBP10.58□□□□□ -0.72
LIMK1-201ENST00000336180 ADAM5Q6NVV9 412 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 IGF2-ASQ6U949 168 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 IGFL3Q6UXB1 125 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 C18orf12Q96KH6 178 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 DECR2Q9NUI1 292 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 GLS2Q9UI32 602 aa10.58□□□□□ -0.72
LIMK1-201ENST00000336180 ARFGEF3Q5TH69 2177 aa10.57□□□□□ -0.72
LIMK1-201ENST00000336180 DEDDO75618 318 aa10.57□□□□□ -0.72
LIMK1-201ENST00000336180 CYB5R3P00387 301 aaPredicted RBP10.57□□□□□ -0.72
LIMK1-201ENST00000336180 IAPPP10997 89 aa10.57□□□□□ -0.72
LIMK1-201ENST00000336180 TESK1Q15569 626 aa10.57□□□□□ -0.72
LIMK1-201ENST00000336180 SELENOHQ8IZQ5 122 aaKnown RBP10.57□□□□□ -0.72
LIMK1-201ENST00000336180 CD177Q8N6Q3 437 aa10.57□□□□□ -0.72
LIMK1-201ENST00000336180 CCDC71LQ8N9Z2 235 aa10.57□□□□□ -0.72
LIMK1-201ENST00000336180 OR13A1Q8NGR1 328 aa10.57□□□□□ -0.72
LIMK1-201ENST00000336180 MRPL37Q9BZE1 423 aaKnown RBP10.57□□□□□ -0.72
LIMK1-201ENST00000336180 DNTTIP1Q9H147 329 aa10.57□□□□□ -0.72
LIMK1-201ENST00000336180 TAAR3PQ9P1P4 343 aa10.57□□□□□ -0.72
LIMK1-201ENST00000336180 AMDHD2Q9Y303 409 aa10.57□□□□□ -0.72
LIMK1-201ENST00000336180 C12orf77C9JDV5 145 aa10.57□□□□□ -0.72
LIMK1-201ENST00000336180 ZNF816Q0VGE8 651 aaPredicted RBP10.57□□□□□ -0.72
LIMK1-201ENST00000336180 NEUROG1Q92886 237 aa10.57□□□□□ -0.72
LIMK1-201ENST00000336180 COQ2Q96H96 371 aa10.57□□□□□ -0.72
LIMK1-201ENST00000336180 TMEM222Q9H0R3 208 aa10.57□□□□□ -0.72
LIMK1-201ENST00000336180 CXXC4Q9H2H0 198 aa10.57□□□□□ -0.72
LIMK1-201ENST00000336180 OR2W1Q9Y3N9 320 aa10.57□□□□□ -0.72
LIMK1-201ENST00000336180 TXNL1O43396 289 aa10.56□□□□□ -0.72
LIMK1-201ENST00000336180 TPT1P13693 172 aaKnown RBP10.56□□□□□ -0.72
LIMK1-201ENST00000336180 IL2RGP31785 369 aa10.56□□□□□ -0.72
LIMK1-201ENST00000336180 DEFA5Q01523 94 aa10.56□□□□□ -0.72
LIMK1-201ENST00000336180 ZNF345Q14585 488 aa10.56□□□□□ -0.72
LIMK1-201ENST00000336180 ACP7Q6ZNF0 438 aa10.56□□□□□ -0.72
LIMK1-201ENST00000336180 Q6ZRM9 215 aa10.56□□□□□ -0.72
LIMK1-201ENST00000336180 DMRT1Q9Y5R6 373 aa10.56□□□□□ -0.72
LIMK1-201ENST00000336180 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.56□□□□□ -0.72
LIMK1-201ENST00000336180 CRYABP02511 175 aaKnown RBP10.56□□□□□ -0.72
LIMK1-201ENST00000336180 P2RY6Q15077 328 aa10.56□□□□□ -0.72
LIMK1-201ENST00000336180 ZNF497Q6ZNH5 498 aa10.56□□□□□ -0.72
LIMK1-201ENST00000336180 FAM57AQ8TBR7 257 aa10.56□□□□□ -0.72
LIMK1-201ENST00000336180 GAB2Q9UQC2 676 aa10.56□□□□□ -0.72
LIMK1-201ENST00000336180 MAP1AP78559 2803 aaPredicted RBP10.56□□□□□ -0.72
LIMK1-201ENST00000336180 MARCH11A6NNE9 402 aa10.56□□□□□ -0.72
LIMK1-201ENST00000336180 PRRG2O14669 202 aa10.56□□□□□ -0.72
LIMK1-201ENST00000336180 RAMP3O60896 148 aa10.56□□□□□ -0.72
LIMK1-201ENST00000336180 TMEM50AO95807 157 aa10.56□□□□□ -0.72
LIMK1-201ENST00000336180 IGLV1-44P01699 117 aa10.56□□□□□ -0.72
LIMK1-201ENST00000336180 MUC1P15941 1255 aaPredicted RBP10.56□□□□□ -0.72
LIMK1-201ENST00000336180 CMTM1Q8IZ96 169 aa10.56□□□□□ -0.72
LIMK1-201ENST00000336180 OR2D2Q9H210 308 aa10.56□□□□□ -0.72
LIMK1-201ENST00000336180 PLK3Q9H4B4 646 aa10.56□□□□□ -0.72
LIMK1-201ENST00000336180 TRBV6-7A0A0A0MS04 114 aa10.55□□□□□ -0.72
LIMK1-201ENST00000336180 KIAA1324LA8MWY0 1029 aaPredicted RBP10.55□□□□□ -0.72
LIMK1-201ENST00000336180 HBZP02008 142 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms