RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 PKDREJQ9NTG1 2253 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 PCNX1Q96RV3 2341 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 COL4A6Q14031 1691 aa12.9□□□□□ -0.35
C9orf47-201ENST00000334490 HLA-DQB1P01920 261 aa12.9□□□□□ -0.35
C9orf47-201ENST00000334490 PDLIM4P50479 330 aa12.9□□□□□ -0.35
C9orf47-201ENST00000334490 OR1L1Q8NH94 360 aa12.9□□□□□ -0.35
C9orf47-201ENST00000334490 ZNF426Q9BUY5 554 aa12.9□□□□□ -0.35
C9orf47-201ENST00000334490 RTN4RQ9BZR6 473 aa12.9□□□□□ -0.35
C9orf47-201ENST00000334490 RHOFQ9HBH0 211 aa12.9□□□□□ -0.35
C9orf47-201ENST00000334490 SIRT7Q9NRC8 400 aa12.9□□□□□ -0.35
C9orf47-201ENST00000334490 TRBV23-1A0A0A0MS06 115 aa12.89□□□□□ -0.35
C9orf47-201ENST00000334490 SMPD2O60906 423 aa12.89□□□□□ -0.35
C9orf47-201ENST00000334490 RCC1P18754 421 aaPredicted RBP12.89□□□□□ -0.35
C9orf47-201ENST00000334490 NPBWR2P48146 333 aa12.89□□□□□ -0.35
C9orf47-201ENST00000334490 C1orf162Q8NEQ5 155 aaPredicted RBP12.89□□□□□ -0.35
C9orf47-201ENST00000334490 OR10G4Q8NGN3 311 aa12.89□□□□□ -0.35
C9orf47-201ENST00000334490 OR10G9Q8NGN4 311 aa12.89□□□□□ -0.35
C9orf47-201ENST00000334490 OR10G7Q8NGN6 311 aa12.89□□□□□ -0.35
C9orf47-201ENST00000334490 OR51I2Q9H344 312 aa12.89□□□□□ -0.35
C9orf47-201ENST00000334490 CALYQ9NYX4 217 aa12.89□□□□□ -0.35
C9orf47-201ENST00000334490 IGKV3-7A0A075B6H7 116 aa12.89□□□□□ -0.35
C9orf47-201ENST00000334490 DBX1A6NMT0 343 aa12.89□□□□□ -0.35
C9orf47-201ENST00000334490 IGHV1-2P23083 117 aa12.89□□□□□ -0.35
C9orf47-201ENST00000334490 DYNLT3P51808 116 aa12.89□□□□□ -0.35
C9orf47-201ENST00000334490 CTDSP1Q9GZU7 261 aa12.89□□□□□ -0.35
C9orf47-201ENST00000334490 TCF20Q9UGU0 1960 aaKnown RBP12.89□□□□□ -0.35
C9orf47-201ENST00000334490 PAX6P26367 422 aa12.89□□□□□ -0.35
C9orf47-201ENST00000334490 BSPH1Q075Z2 132 aa12.89□□□□□ -0.35
C9orf47-201ENST00000334490 FDX2Q6P4F2 183 aa12.89□□□□□ -0.35
C9orf47-201ENST00000334490 OR4D10Q8NGI6 311 aa12.89□□□□□ -0.35
C9orf47-201ENST00000334490 TMEM208Q9BTX3 173 aa12.89□□□□□ -0.35
C9orf47-201ENST00000334490 LINC00114Q6XXX2 140 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 OR5R1Q8NH85 324 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 FAM131CQ96AQ9 280 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 C20orf202A1L168 122 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 NPY1RP25929 384 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 ERVS71-1P61550 626 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 CD200R1LQ6Q8B3 271 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 TEX261Q6UWH6 196 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 NEURL2Q9BR09 285 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 PPP1R3EQ9H7J1 279 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 U3KQ87 197 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 MC5RP33032 325 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 H3F3AP84243 136 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 SSMEM1Q8WWF3 244 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 A0A1B0GU03 582 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 LOC390937A0A1W2PQ73 354 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 PINLYPA6NC86 204 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 H0Y8G0 127 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 HPRT1P00492 218 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 SPP1P10451 314 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 PLAC9Q5JTB6 97 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 SAXO1Q8IYX7 474 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 RHOVQ96L33 236 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 CABLES2Q9BTV7 478 aa12.88□□□□□ -0.35
C9orf47-201ENST00000334490 HEATR5BQ9P2D3 2071 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 P2RY1P47900 373 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 ZNF154Q13106 437 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 KCNMB1Q16558 191 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 Q8WTZ3 238 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 DHRS9Q9BPW9 319 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 NKX6-2Q9C056 277 aaPredicted RBP12.87□□□□□ -0.35
C9orf47-201ENST00000334490 FAM106CPP0CH98 169 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 VAX1Q5SQQ9 334 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 ASCL3Q9NQ33 180 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 VSIG4Q9Y279 399 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 LOC105371242A0A075B767 164 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 CXCL3P19876 107 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 NDUFA6P56556 154 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 TMEM50BP56557 158 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 ERVFC1-1P60608 527 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 GAMTQ14353 236 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 GUK1Q16774 197 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 FAM209AQ5JX71 171 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 FAM219AQ8IW50 185 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 OR8I2Q8N0Y5 310 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 KLK2P20151 261 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 HTR1DP28221 377 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 GLIPR1P48060 266 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 UNQ9370/PRO34162Q6UXP9 181 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 OR5P3Q8WZ94 311 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 CLEC5AQ9NY25 188 aa12.87□□□□□ -0.35
C9orf47-201ENST00000334490 DOCK4Q8N1I0 1966 aa12.86□□□□□ -0.35
C9orf47-201ENST00000334490 IGHV3-21A0A0B4J1V1 117 aa12.86□□□□□ -0.35
C9orf47-201ENST00000334490 IGHV2OR16-5A0A0B4J2B6 119 aa12.86□□□□□ -0.35
C9orf47-201ENST00000334490 RPL27AP46776 148 aaKnown RBP12.86□□□□□ -0.35
C9orf47-201ENST00000334490 UBE2L3P68036 154 aaKnown RBP12.86□□□□□ -0.35
C9orf47-201ENST00000334490 MEGF10Q96KG7 1140 aa12.86□□□□□ -0.35
C9orf47-201ENST00000334490 SCGB1D1O95968 90 aa12.86□□□□□ -0.35
C9orf47-201ENST00000334490 PTGDSP41222 190 aa12.86□□□□□ -0.35
C9orf47-201ENST00000334490 PAX5Q02548 391 aa12.86□□□□□ -0.35
C9orf47-201ENST00000334490 NRN1LQ496H8 165 aa12.86□□□□□ -0.35
C9orf47-201ENST00000334490 ZNRF4Q8WWF5 429 aa12.86□□□□□ -0.35
C9orf47-201ENST00000334490 PARP11Q9NR21 331 aa12.86□□□□□ -0.35
C9orf47-201ENST00000334490 IDI2-AS1Q9NZ38 188 aa12.86□□□□□ -0.35
C9orf47-201ENST00000334490 OR51B2Q9Y5P1 312 aa12.86□□□□□ -0.35
C9orf47-201ENST00000334490 WSB1Q9Y6I7 421 aa12.86□□□□□ -0.35
C9orf47-201ENST00000334490 IGLV3-32A0A0A0MS00 114 aa12.86□□□□□ -0.35
C9orf47-201ENST00000334490 ALX3O95076 343 aa12.86□□□□□ -0.35
C9orf47-201ENST00000334490 TBR1Q16650 682 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms