RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 OR4A16Q8NH70 328 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 BORCS7Q96B45 105 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 CACNG5Q9UF02 275 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 ZG16O60844 167 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 CD8AP01732 235 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 SEC11BP0C7V7 166 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 COX6B1P14854 86 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 TMEM241Q24JQ0 296 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 ZNF573Q86YE8 665 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 DEFB108BQ8NET1 73 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 LINC01560Q8TB33 94 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 TIMD4Q96H15 378 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 ACTR3CQ9C0K3 210 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-201ENST00000334136 NOTCH2Q04721 2471 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 GALR1P47211 349 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 RPP30P78346 268 aaKnown RBP10.13□□□□□ -0.79
HDAC6-201ENST00000334136 PIGYQ3MUY2 71 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 ZNF837Q96EG3 531 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-201ENST00000334136 RSPO3Q9BXY4 272 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-201ENST00000334136 GSN-AS1Q9NRJ2 163 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 DOK5Q9P104 306 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 POLDIP2Q9Y2S7 368 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 LHFPL6Q9Y693 200 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 IGKV3D-15A0A087WSY6 115 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 A1L4Q6 167 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 TCAPO15273 167 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 PDCD6O75340 191 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 COX5AP20674 150 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 CA6P23280 308 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 FUT6P51993 359 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 EDDM3BP56851 147 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 LY6G6FQ5SQ64 297 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 TIMM23BQ5SRD1 257 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 DHRS7BQ6IAN0 325 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-201ENST00000334136 SLC35G3Q8N808 338 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 TAAR3PQ9P1P4 343 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 IGKV1D-43A0A0B4J1Z2 117 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 SURF2Q15527 256 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-201ENST00000334136 SLC25A40Q8TBP6 338 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 RARRES2Q99969 163 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 SPG11Q96JI7 2443 aa10.13□□□□□ -0.79
HDAC6-201ENST00000334136 TRAV34A0A0B4J273 112 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 CD74P04233 296 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 TNFRSF1AP19438 455 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 P2RY1P47900 373 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 ROM1Q03395 351 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 TEX30Q5JUR7 227 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 PRAMEF5Q5TYX0 476 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 PRAMEF6Q5VXH4 476 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 TBC1D26Q86UD7 250 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 FAM58AQ8N1B3 248 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 ZIC4Q8N9L1 334 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 MS4A10Q96PG2 267 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 GFI1Q99684 422 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 SH3BGRL3Q9H299 93 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 TRAV39A0A0B4J263 110 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 ETV2O00321 342 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-201ENST00000334136 ZNF737O75373 536 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 IGHV1-2P23083 117 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 SPINK9Q5DT21 86 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 MRPL13Q9BYD1 178 aaKnown RBP10.12□□□□□ -0.79
HDAC6-201ENST00000334136 UBTD1Q9HAC8 227 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 BPTFQ12830 3046 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 J3QRE1 110 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 HKR1P10072 659 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 CA7P43166 264 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 KIR2DL2P43627 348 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-201ENST00000334136 IQCJQ1A5X6 159 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 C1orf100Q5SVJ3 147 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 ZNF343Q6P1L6 599 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 AQP3Q92482 292 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 HIPK2Q9H2X6 1198 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 CLCF1Q9UBD9 225 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 STARD10Q9Y365 291 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 TRAPPC1Q9Y5R8 145 aa10.12□□□□□ -0.79
HDAC6-201ENST00000334136 MPPED1O15442 326 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 PPYP01298 95 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 MBPP02686 304 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-201ENST00000334136 SLC25A6P12236 298 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 B2MP61769 119 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 RNASE6Q93091 150 aaKnown RBP10.11□□□□□ -0.79
HDAC6-201ENST00000334136 PTX4Q96A99 478 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 REG4Q9BYZ8 158 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 OR2J1Q9GZK6 312 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 F6UZH7 168 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 FBP1P09467 338 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 FSTP19883 344 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 GNG3P63215 75 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 BSXQ3C1V8 233 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 VAX1Q5SQQ9 334 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 GAPTQ8N292 157 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 SIGLECL1Q8N7X8 197 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 AQP10Q96PS8 301 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 EPG5Q9HCE0 2579 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 MBD3L4A6NDZ8 208 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-201ENST00000334136 MBD3L3A6NE82 208 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-201ENST00000334136 MBD3L5A6NJ08 208 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-201ENST00000334136 OR8U8P0C7N1 319 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 UCP2P55851 309 aa10.11□□□□□ -0.79
HDAC6-201ENST00000334136 FAM3AP98173 230 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms