RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ZNF66Q6ZN08 573 aa20.07■□□□□ 0.8
TSKU-201ENST00000333090 ZNF664Q8N3J9 261 aa20.07■□□□□ 0.8
TSKU-201ENST00000333090 PPP5D1E7EU14 171 aa20.07■□□□□ 0.8
TSKU-201ENST00000333090 MKRN2OSH3BPM6 223 aa20.07■□□□□ 0.8
TSKU-201ENST00000333090 P04436 131 aa20.07■□□□□ 0.8
TSKU-201ENST00000333090 GZMHP20718 246 aa20.07■□□□□ 0.8
TSKU-201ENST00000333090 TESK1Q15569 626 aa20.07■□□□□ 0.8
TSKU-201ENST00000333090 SSX2Q16385 188 aa20.07■□□□□ 0.8
TSKU-201ENST00000333090 OR10V1Q8NGI7 309 aa20.07■□□□□ 0.8
TSKU-201ENST00000333090 PINX1Q96BK5 328 aaKnown RBP20.07■□□□□ 0.8
TSKU-201ENST00000333090 RIMS4Q9H426 269 aaPredicted RBP20.07■□□□□ 0.8
TSKU-201ENST00000333090 RBM7Q9Y580 266 aaKnown RBP20.07■□□□□ 0.8
TSKU-201ENST00000333090 H7BYZ3 331 aa20.06■□□□□ 0.8
TSKU-201ENST00000333090 PAX1P15863 534 aa20.06■□□□□ 0.8
TSKU-201ENST00000333090 GALR1P47211 349 aa20.06■□□□□ 0.8
TSKU-201ENST00000333090 RTP5Q14D33 572 aa20.06■□□□□ 0.8
TSKU-201ENST00000333090 OR8G2PQ6IF36 304 aa20.06■□□□□ 0.8
TSKU-201ENST00000333090 MYPOPQ86VE0 399 aaPredicted RBP20.06■□□□□ 0.8
TSKU-201ENST00000333090 RPP25LQ8N5L8 163 aaKnown RBP20.06■□□□□ 0.8
TSKU-201ENST00000333090 RNASEH2CQ8TDP1 164 aaKnown RBP20.06■□□□□ 0.8
TSKU-201ENST00000333090 DUSP23Q9BVJ7 150 aa20.06■□□□□ 0.8
TSKU-201ENST00000333090 A8MWP6 167 aa20.06■□□□□ 0.8
TSKU-201ENST00000333090 IGKV1D-33P01593 117 aa20.06■□□□□ 0.8
TSKU-201ENST00000333090 IGKV1-33P01594 117 aa20.06■□□□□ 0.8
TSKU-201ENST00000333090 SNRPCP09234 159 aaKnown RBP20.06■□□□□ 0.8
TSKU-201ENST00000333090 EPHA8P29322 1005 aaPredicted RBP20.06■□□□□ 0.8
TSKU-201ENST00000333090 DBX2Q6ZNG2 339 aa20.06■□□□□ 0.8
TSKU-201ENST00000333090 AGBL5Q8NDL9 886 aa20.06■□□□□ 0.8
TSKU-201ENST00000333090 OR51G1Q8NGK1 321 aa20.06■□□□□ 0.8
TSKU-201ENST00000333090 LSM10Q969L4 123 aaKnown RBP20.06■□□□□ 0.8
TSKU-201ENST00000333090 OR5B12Q96R08 314 aa20.06■□□□□ 0.8
TSKU-201ENST00000333090 ELOVL1Q9BW60 279 aa20.06■□□□□ 0.8
TSKU-201ENST00000333090 PIGBOS1A0A0B4J2F0 54 aa20.05■□□□□ 0.8
TSKU-201ENST00000333090 ARGFXA6NJG6 315 aa20.05■□□□□ 0.8
TSKU-201ENST00000333090 LRRC3CA6NJW4 275 aa20.05■□□□□ 0.8
TSKU-201ENST00000333090 UBALD1Q8TB05 177 aa20.05■□□□□ 0.8
TSKU-201ENST00000333090 TAF15Q92804 592 aaKnown RBP eCLIP20.05■□□□□ 0.8
TSKU-201ENST00000333090 NCKAP5O14513 1909 aa20.05■□□□□ 0.8
TSKU-201ENST00000333090 ARHGAP21Q5T5U3 1957 aa20.05■□□□□ 0.8
TSKU-201ENST00000333090 TRAV24A0A0B4J272 114 aa20.05■□□□□ 0.8
TSKU-201ENST00000333090 A0A1W2PPQ1 181 aa20.05■□□□□ 0.8
TSKU-201ENST00000333090 IDH3GP51553 393 aaPredicted RBP20.05■□□□□ 0.8
TSKU-201ENST00000333090 RPL23P62829 140 aaKnown RBP20.05■□□□□ 0.8
TSKU-201ENST00000333090 ARF1P84077 181 aaKnown RBP20.05■□□□□ 0.8
TSKU-201ENST00000333090 ACSF3Q4G176 576 aaPredicted RBP20.05■□□□□ 0.8
TSKU-201ENST00000333090 ADGRG7Q96K78 797 aa20.05■□□□□ 0.8
TSKU-201ENST00000333090 PCGF1Q9BSM1 259 aa20.05■□□□□ 0.8
TSKU-201ENST00000333090 KCNS2Q9ULS6 477 aa20.05■□□□□ 0.8
TSKU-201ENST00000333090 KBTBD11O94819 623 aa20.04■□□□□ 0.8
TSKU-201ENST00000333090 APLNRP35414 380 aa20.04■□□□□ 0.8
TSKU-201ENST00000333090 TCEAL6Q6IPX3 200 aa20.04■□□□□ 0.8
TSKU-201ENST00000333090 PYGO2Q9BRQ0 406 aa20.04■□□□□ 0.8
TSKU-201ENST00000333090 ZDBF2Q9HCK1 2354 aa20.04■□□□□ 0.8
TSKU-201ENST00000333090 NGFP01138 241 aa20.04■□□□□ 0.8
TSKU-201ENST00000333090 SLC38A11Q08AI6 406 aa20.04■□□□□ 0.8
TSKU-201ENST00000333090 AGMATQ9BSE5 352 aa20.04■□□□□ 0.8
TSKU-201ENST00000333090 C2orf88Q9BSF0 95 aa20.04■□□□□ 0.8
TSKU-201ENST00000333090 ACTR3CQ9C0K3 210 aaPredicted RBP20.04■□□□□ 0.8
TSKU-201ENST00000333090 SLC25A22Q9H936 323 aa20.04■□□□□ 0.8
TSKU-201ENST00000333090 IGLV2-14P01704 120 aa20.04■□□□□ 0.8
TSKU-201ENST00000333090 FGF5P12034 268 aa20.04■□□□□ 0.8
TSKU-201ENST00000333090 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.04■□□□□ 0.8
TSKU-201ENST00000333090 SGCZQ96LD1 299 aa20.04■□□□□ 0.8
TSKU-201ENST00000333090 PRRG4Q9BZD6 226 aa20.04■□□□□ 0.8
TSKU-201ENST00000333090 PATE3B3GLJ2 98 aa20.03■□□□□ 0.8
TSKU-201ENST00000333090 WDR1O75083 606 aa20.03■□□□□ 0.8
TSKU-201ENST00000333090 MRPL33O75394 65 aaKnown RBP20.03■□□□□ 0.8
TSKU-201ENST00000333090 TMEM37Q8WXS4 190 aa20.03■□□□□ 0.8
TSKU-201ENST00000333090 RAB24Q969Q5 203 aa20.03■□□□□ 0.8
TSKU-201ENST00000333090 LURAP1Q96LR2 239 aa20.03■□□□□ 0.8
TSKU-201ENST00000333090 PARLQ9H300 379 aa20.03■□□□□ 0.8
TSKU-201ENST00000333090 PRDM6Q9NQX0 595 aa20.03■□□□□ 0.8
TSKU-201ENST00000333090 PSMB3P49720 205 aa20.02■□□□□ 0.8
TSKU-201ENST00000333090 HLA-BQ31612 363 aa20.02■□□□□ 0.8
TSKU-201ENST00000333090 CYTIPO60759 359 aa20.02■□□□□ 0.79
TSKU-201ENST00000333090 PDGFBP01127 241 aaPredicted RBP20.02■□□□□ 0.79
TSKU-201ENST00000333090 ZNF585BQ52M93 769 aa20.02■□□□□ 0.79
TSKU-201ENST00000333090 TGIF2LYQ8IUE0 185 aa20.02■□□□□ 0.79
TSKU-201ENST00000333090 NOL4LQ96MY1 436 aaPredicted RBP20.02■□□□□ 0.79
TSKU-201ENST00000333090 TMEM9BQ9NQ34 198 aa20.02■□□□□ 0.79
TSKU-201ENST00000333090 DLL3Q9NYJ7 618 aa20.02■□□□□ 0.79
TSKU-201ENST00000333090 FUT9Q9Y231 359 aa20.02■□□□□ 0.79
TSKU-201ENST00000333090 A0A1W2PR80 420 aa20.01■□□□□ 0.79
TSKU-201ENST00000333090 CLDN1O95832 211 aa20.01■□□□□ 0.79
TSKU-201ENST00000333090 LBHQ53QV2 105 aaPredicted RBP20.01■□□□□ 0.79
TSKU-201ENST00000333090 OR5A2Q8NGI9 324 aa20.01■□□□□ 0.79
TSKU-201ENST00000333090 OR4F5Q8NH21 305 aa20.01■□□□□ 0.79
TSKU-201ENST00000333090 GATAD1Q8WUU5 269 aa20.01■□□□□ 0.79
TSKU-201ENST00000333090 OR4F4Q96R69 305 aa20.01■□□□□ 0.79
TSKU-201ENST00000333090 ASPMQ8IZT6 3477 aa20.01■□□□□ 0.79
TSKU-201ENST00000333090 FAM186AA6NE01 2351 aa20.01■□□□□ 0.79
TSKU-201ENST00000333090 CFIP05156 583 aa20.01■□□□□ 0.79
TSKU-201ENST00000333090 CCL4P13236 92 aa20.01■□□□□ 0.79
TSKU-201ENST00000333090 FOXG1P55316 489 aaPredicted RBP20.01■□□□□ 0.79
TSKU-201ENST00000333090 COA6Q5JTJ3 125 aaKnown RBP20.01■□□□□ 0.79
TSKU-201ENST00000333090 LYSMD4Q5XG99 296 aa20.01■□□□□ 0.79
TSKU-201ENST00000333090 TGIF2LXQ8IUE1 241 aa20.01■□□□□ 0.79
TSKU-201ENST00000333090 FAM58AQ8N1B3 248 aa20.01■□□□□ 0.79
TSKU-201ENST00000333090 HLA-CQ95604 372 aa20.01■□□□□ 0.79
TSKU-201ENST00000333090 APOBEC3DQ96AK3 386 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms