RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 ZNF747Q9BV97 191 aa13.16□□□□□ -0.3
C11orf88-201ENST00000332814 C16orf95Q9H693 158 aa13.16□□□□□ -0.3
C11orf88-201ENST00000332814 SLC23A1Q9UHI7 598 aa13.16□□□□□ -0.3
C11orf88-201ENST00000332814 KCNK7Q9Y2U2 307 aa13.16□□□□□ -0.3
C11orf88-201ENST00000332814 KIAA2026Q5HYC2 2103 aa13.16□□□□□ -0.3
C11orf88-201ENST00000332814 IGHV1-3A0A0C4DH29 117 aa13.15□□□□□ -0.3
C11orf88-201ENST00000332814 A0A1W2PPI3 338 aa13.15□□□□□ -0.3
C11orf88-201ENST00000332814 PEX14O75381 377 aa13.15□□□□□ -0.3
C11orf88-201ENST00000332814 SNRNP70P08621 437 aaKnown RBP13.15□□□□□ -0.3
C11orf88-201ENST00000332814 GSTP1P09211 210 aaKnown RBP13.15□□□□□ -0.3
C11orf88-201ENST00000332814 RPS19P39019 145 aaKnown RBP13.15□□□□□ -0.3
C11orf88-201ENST00000332814 VBP1P61758 197 aa13.15□□□□□ -0.3
C11orf88-201ENST00000332814 DIAPH2-AS1Q14236 149 aa13.15□□□□□ -0.3
C11orf88-201ENST00000332814 CDNFQ49AH0 187 aa13.15□□□□□ -0.3
C11orf88-201ENST00000332814 CCBE1Q6UXH8 406 aaPredicted RBP13.15□□□□□ -0.3
C11orf88-201ENST00000332814 C5orf24Q7Z6I8 188 aa13.15□□□□□ -0.3
C11orf88-201ENST00000332814 OR5H6Q8NGV6 325 aa13.15□□□□□ -0.3
C11orf88-201ENST00000332814 EDARADDQ8WWZ3 215 aa13.15□□□□□ -0.3
C11orf88-201ENST00000332814 PRSS22Q9GZN4 317 aa13.15□□□□□ -0.3
C11orf88-201ENST00000332814 DIABLOQ9NR28 239 aa13.15□□□□□ -0.3
C11orf88-201ENST00000332814 SPATA2Q9UM82 520 aa13.15□□□□□ -0.3
C11orf88-201ENST00000332814 FABP7O15540 132 aa13.14□□□□□ -0.31
C11orf88-201ENST00000332814 OR2F2O95006 317 aa13.14□□□□□ -0.31
C11orf88-201ENST00000332814 IGKV1D-33P01593 117 aa13.14□□□□□ -0.31
C11orf88-201ENST00000332814 IGKV1-33P01594 117 aa13.14□□□□□ -0.31
C11orf88-201ENST00000332814 SCTP09683 121 aa13.14□□□□□ -0.31
C11orf88-201ENST00000332814 TMEM11P17152 192 aa13.14□□□□□ -0.31
C11orf88-201ENST00000332814 ZNF134P52741 427 aa13.14□□□□□ -0.31
C11orf88-201ENST00000332814 PITPNAQ00169 270 aa13.14□□□□□ -0.31
C11orf88-201ENST00000332814 LY6G6FQ5SQ64 297 aa13.14□□□□□ -0.31
C11orf88-201ENST00000332814 GPR107Q5VW38 600 aa13.14□□□□□ -0.31
C11orf88-201ENST00000332814 C11orf88Q6PI97 169 aa13.14□□□□□ -0.31
C11orf88-201ENST00000332814 Q6ZPA2 131 aa13.14□□□□□ -0.31
C11orf88-201ENST00000332814 THNSL2Q86YJ6 484 aa13.14□□□□□ -0.31
C11orf88-201ENST00000332814 ANKRD13BQ86YJ7 626 aa13.14□□□□□ -0.31
C11orf88-201ENST00000332814 OR4A4PQ8NGN8 299 aa13.14□□□□□ -0.31
C11orf88-201ENST00000332814 RTN4IP1Q8WWV3 396 aaPredicted RBP13.14□□□□□ -0.31
C11orf88-201ENST00000332814 WFDC12Q8WWY7 111 aa13.14□□□□□ -0.31
C11orf88-201ENST00000332814 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.14□□□□□ -0.31
C11orf88-201ENST00000332814 A0A0A6YYH2 397 aa13.13□□□□□ -0.31
C11orf88-201ENST00000332814 TMEM235A6NFC5 223 aa13.13□□□□□ -0.31
C11orf88-201ENST00000332814 A6NJ64 397 aa13.13□□□□□ -0.31
C11orf88-201ENST00000332814 M0QZK8 103 aa13.13□□□□□ -0.31
C11orf88-201ENST00000332814 NOL3O60936 208 aaKnown RBP13.13□□□□□ -0.31
C11orf88-201ENST00000332814 GABARAPO95166 117 aa13.13□□□□□ -0.31
C11orf88-201ENST00000332814 CEACAM6P40199 344 aa13.13□□□□□ -0.31
C11orf88-201ENST00000332814 PNLIPRP3Q17RR3 467 aa13.13□□□□□ -0.31
C11orf88-201ENST00000332814 UBE2NLQ5JXB2 153 aa13.13□□□□□ -0.31
C11orf88-201ENST00000332814 HACD4Q5VWC8 232 aa13.13□□□□□ -0.31
C11orf88-201ENST00000332814 MAFIPQ8WZ33 124 aa13.13□□□□□ -0.31
C11orf88-201ENST00000332814 SLC25A46Q96AG3 418 aa13.13□□□□□ -0.31
C11orf88-201ENST00000332814 SLC25A38Q96DW6 304 aa13.13□□□□□ -0.31
C11orf88-201ENST00000332814 RBM14Q96PK6 669 aaKnown RBP13.13□□□□□ -0.31
C11orf88-201ENST00000332814 PIPOXQ9P0Z9 390 aa13.13□□□□□ -0.31
C11orf88-201ENST00000332814 OR1A1Q9P1Q5 309 aa13.13□□□□□ -0.31
C11orf88-201ENST00000332814 MOB4Q9Y3A3 225 aa13.13□□□□□ -0.31
C11orf88-201ENST00000332814 TRAV18A0A075B6X5 111 aa13.12□□□□□ -0.31
C11orf88-201ENST00000332814 IGHV3-72A0A0B4J1Y9 119 aa13.12□□□□□ -0.31
C11orf88-201ENST00000332814 BET1O15155 118 aa13.12□□□□□ -0.31
C11orf88-201ENST00000332814 ST8SIA5O15466 376 aa13.12□□□□□ -0.31
C11orf88-201ENST00000332814 LANCL1O43813 399 aa13.12□□□□□ -0.31
C11orf88-201ENST00000332814 DTYMKP23919 212 aa13.12□□□□□ -0.31
C11orf88-201ENST00000332814 ZNF137PP52743 207 aa13.12□□□□□ -0.31
C11orf88-201ENST00000332814 HNF4GQ14541 408 aa13.12□□□□□ -0.31
C11orf88-201ENST00000332814 IZUMO1Q8IYV9 350 aa13.12□□□□□ -0.31
C11orf88-201ENST00000332814 SAMD12Q8N8I0 201 aa13.12□□□□□ -0.31
C11orf88-201ENST00000332814 OR10J5Q8NHC4 309 aa13.12□□□□□ -0.31
C11orf88-201ENST00000332814 NUDCD2Q8WVJ2 157 aa13.12□□□□□ -0.31
C11orf88-201ENST00000332814 CFHR4Q92496 578 aa13.12□□□□□ -0.31
C11orf88-201ENST00000332814 ST6GALNAC6Q969X2 333 aa13.12□□□□□ -0.31
C11orf88-201ENST00000332814 KCTD12Q96CX2 325 aaKnown RBP13.12□□□□□ -0.31
C11orf88-201ENST00000332814 S100A16Q96FQ6 103 aaKnown RBP13.12□□□□□ -0.31
C11orf88-201ENST00000332814 S1PR3Q99500 378 aa13.12□□□□□ -0.31
C11orf88-201ENST00000332814 GINS4Q9BRT9 223 aa13.12□□□□□ -0.31
C11orf88-201ENST00000332814 ZNF230Q9UIE0 474 aaPredicted RBP13.12□□□□□ -0.31
C11orf88-201ENST00000332814 SAA2-SAA4A0A096LPE2 208 aa13.11□□□□□ -0.31
C11orf88-201ENST00000332814 FAM90A9PA6NNJ1 464 aa13.11□□□□□ -0.31
C11orf88-201ENST00000332814 RAB29O14966 203 aa13.11□□□□□ -0.31
C11orf88-201ENST00000332814 SAA2P0DJI9 122 aaPredicted RBP13.11□□□□□ -0.31
C11orf88-201ENST00000332814 ALDH3B2P48448 385 aa13.11□□□□□ -0.31
C11orf88-201ENST00000332814 RORCP51449 518 aa13.11□□□□□ -0.31
C11orf88-201ENST00000332814 PROK1P58294 105 aa13.11□□□□□ -0.31
C11orf88-201ENST00000332814 SRSF7Q16629 238 aaKnown RBP eCLIP13.11□□□□□ -0.31
C11orf88-201ENST00000332814 ZNF260Q3ZCT1 412 aa13.11□□□□□ -0.31
C11orf88-201ENST00000332814 C9orf152Q5JTZ5 239 aa13.11□□□□□ -0.31
C11orf88-201ENST00000332814 OR2T10Q8NGZ9 312 aa13.11□□□□□ -0.31
C11orf88-201ENST00000332814 AP3S1Q92572 193 aa13.11□□□□□ -0.31
C11orf88-201ENST00000332814 ST6GALNAC5Q9BVH7 336 aa13.11□□□□□ -0.31
C11orf88-201ENST00000332814 NAA50Q9GZZ1 169 aaKnown RBP13.11□□□□□ -0.31
C11orf88-201ENST00000332814 DCSTAMPQ9H295 470 aa13.11□□□□□ -0.31
C11orf88-201ENST00000332814 IFI27L2Q9H2X8 130 aa13.11□□□□□ -0.31
C11orf88-201ENST00000332814 GHITMQ9H3K2 345 aa13.11□□□□□ -0.31
C11orf88-201ENST00000332814 ZNF702PQ9H963 129 aa13.11□□□□□ -0.31
C11orf88-201ENST00000332814 ZNF221Q9UK13 617 aa13.11□□□□□ -0.31
C11orf88-201ENST00000332814 SIGLEC9Q9Y336 463 aa13.11□□□□□ -0.31
C11orf88-201ENST00000332814 ITGB1BP1O14713 200 aa13.1□□□□□ -0.31
C11orf88-201ENST00000332814 TFAP2AP05549 437 aa13.1□□□□□ -0.31
C11orf88-201ENST00000332814 GSTT2P0CG29 244 aa13.1□□□□□ -0.31
C11orf88-201ENST00000332814 GSTT2BP0CG30 244 aa13.1□□□□□ -0.31
C11orf88-201ENST00000332814 CD1BP29016 333 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms