RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 RPS19P39019 145 aaKnown RBP11.23□□□□□ -0.61
LIMS1-201ENST00000332345 ZNF137PP52743 207 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 PROK1P58294 105 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 HLA-DRB3P79483 266 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 ARFRP1Q13795 201 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 DIAPH2-AS1Q14236 149 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 CDNFQ49AH0 187 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 C5orf24Q7Z6I8 188 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 LYG1Q8N1E2 194 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 DRAM1Q8N682 238 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 OR2AK2Q8NG84 335 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 LGALS14Q8TCE9 139 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 RTN4IP1Q8WWV3 396 aaPredicted RBP11.23□□□□□ -0.61
LIMS1-201ENST00000332345 ST6GALNAC6Q969X2 333 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 ABHD14AQ9BUJ0 271 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 GHITMQ9H3K2 345 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 IGHV1-3A0A0C4DH29 117 aa11.22□□□□□ -0.61
LIMS1-201ENST00000332345 M0QZK8 103 aa11.22□□□□□ -0.61
LIMS1-201ENST00000332345 SNRNP70P08621 437 aaKnown RBP11.22□□□□□ -0.61
LIMS1-201ENST00000332345 SCTP09683 121 aa11.22□□□□□ -0.61
LIMS1-201ENST00000332345 CEACAM6P40199 344 aa11.22□□□□□ -0.61
LIMS1-201ENST00000332345 REG1BP48304 166 aa11.22□□□□□ -0.61
LIMS1-201ENST00000332345 PITPNAQ00169 270 aa11.22□□□□□ -0.61
LIMS1-201ENST00000332345 HES1Q14469 280 aa11.22□□□□□ -0.61
LIMS1-201ENST00000332345 GNMTQ14749 295 aa11.22□□□□□ -0.61
LIMS1-201ENST00000332345 KIR2DS1Q14954 304 aa11.22□□□□□ -0.61
LIMS1-201ENST00000332345 Q6ZPA2 131 aa11.22□□□□□ -0.61
LIMS1-201ENST00000332345 TGIF2LXQ8IUE1 241 aa11.22□□□□□ -0.61
LIMS1-201ENST00000332345 OR4A4PQ8NGN8 299 aa11.22□□□□□ -0.61
LIMS1-201ENST00000332345 OR56B4Q8NH76 319 aa11.22□□□□□ -0.61
LIMS1-201ENST00000332345 SGMS2Q8NHU3 365 aa11.22□□□□□ -0.61
LIMS1-201ENST00000332345 CFHR4Q92496 578 aa11.22□□□□□ -0.61
LIMS1-201ENST00000332345 SLC25A33Q9BSK2 321 aa11.22□□□□□ -0.61
LIMS1-201ENST00000332345 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.22□□□□□ -0.61
LIMS1-201ENST00000332345 RHBDL2Q9NX52 303 aa11.22□□□□□ -0.61
LIMS1-201ENST00000332345 SLC23A1Q9UHI7 598 aa11.22□□□□□ -0.61
LIMS1-201ENST00000332345 SPATA2Q9UM82 520 aa11.22□□□□□ -0.61
LIMS1-201ENST00000332345 ITGB1BP1O14713 200 aa11.21□□□□□ -0.61
LIMS1-201ENST00000332345 LANCL1O43813 399 aa11.21□□□□□ -0.61
LIMS1-201ENST00000332345 FCGR3AP08637 254 aa11.21□□□□□ -0.61
LIMS1-201ENST00000332345 GSTP1P09211 210 aaKnown RBP11.21□□□□□ -0.61
LIMS1-201ENST00000332345 SMIM18P0DKX4 95 aa11.21□□□□□ -0.61
LIMS1-201ENST00000332345 TMEM11P17152 192 aa11.21□□□□□ -0.61
LIMS1-201ENST00000332345 CD1BP29016 333 aa11.21□□□□□ -0.61
LIMS1-201ENST00000332345 TGFBR1P36897 503 aa11.21□□□□□ -0.61
LIMS1-201ENST00000332345 SERPINB10P48595 397 aa11.21□□□□□ -0.61
LIMS1-201ENST00000332345 BLCAPP62952 87 aa11.21□□□□□ -0.61
LIMS1-201ENST00000332345 HABP2Q14520 560 aaPredicted RBP11.21□□□□□ -0.61
LIMS1-201ENST00000332345 SRSF7Q16629 238 aaKnown RBP eCLIP11.21□□□□□ -0.61
LIMS1-201ENST00000332345 ARSJQ5FYB0 599 aaPredicted RBP11.21□□□□□ -0.61
LIMS1-201ENST00000332345 HACD4Q5VWC8 232 aa11.21□□□□□ -0.61
LIMS1-201ENST00000332345 Q8N2B8 174 aa11.21□□□□□ -0.61
LIMS1-201ENST00000332345 WFDC12Q8WWY7 111 aa11.21□□□□□ -0.61
LIMS1-201ENST00000332345 EDARADDQ8WWZ3 215 aa11.21□□□□□ -0.61
LIMS1-201ENST00000332345 ZNF702PQ9H963 129 aa11.21□□□□□ -0.61
LIMS1-201ENST00000332345 DIABLOQ9NR28 239 aa11.21□□□□□ -0.61
LIMS1-201ENST00000332345 PIPOXQ9P0Z9 390 aa11.21□□□□□ -0.61
LIMS1-201ENST00000332345 A0A0A6YYH2 397 aa11.2□□□□□ -0.62
LIMS1-201ENST00000332345 A6NJ64 397 aa11.2□□□□□ -0.62
LIMS1-201ENST00000332345 RAB29O14966 203 aa11.2□□□□□ -0.62
LIMS1-201ENST00000332345 FABP7O15540 132 aa11.2□□□□□ -0.62
LIMS1-201ENST00000332345 IGKV1D-33P01593 117 aa11.2□□□□□ -0.62
LIMS1-201ENST00000332345 IGKV1-33P01594 117 aa11.2□□□□□ -0.62
LIMS1-201ENST00000332345 DTYMKP23919 212 aa11.2□□□□□ -0.62
LIMS1-201ENST00000332345 EBI3Q14213 229 aa11.2□□□□□ -0.62
LIMS1-201ENST00000332345 PNLIPRP3Q17RR3 467 aa11.2□□□□□ -0.62
LIMS1-201ENST00000332345 ANKRD13BQ86YJ7 626 aa11.2□□□□□ -0.62
LIMS1-201ENST00000332345 OR5H6Q8NGV6 325 aa11.2□□□□□ -0.62
LIMS1-201ENST00000332345 OR2T10Q8NGZ9 312 aa11.2□□□□□ -0.62
LIMS1-201ENST00000332345 SLC25A46Q96AG3 418 aa11.2□□□□□ -0.62
LIMS1-201ENST00000332345 S1PR3Q99500 378 aa11.2□□□□□ -0.62
LIMS1-201ENST00000332345 SIGLEC9Q9Y336 463 aa11.2□□□□□ -0.62
LIMS1-201ENST00000332345 PEX14O75381 377 aa11.19□□□□□ -0.62
LIMS1-201ENST00000332345 DIRAS3O95661 229 aa11.19□□□□□ -0.62
LIMS1-201ENST00000332345 VBP1P61758 197 aa11.19□□□□□ -0.62
LIMS1-201ENST00000332345 NCS1P62166 190 aa11.19□□□□□ -0.62
LIMS1-201ENST00000332345 HNF4GQ14541 408 aa11.19□□□□□ -0.62
LIMS1-201ENST00000332345 ZNF260Q3ZCT1 412 aa11.19□□□□□ -0.62
LIMS1-201ENST00000332345 Q6ZS49 121 aa11.19□□□□□ -0.62
LIMS1-201ENST00000332345 GPR141Q7Z602 305 aa11.19□□□□□ -0.62
LIMS1-201ENST00000332345 IZUMO1Q8IYV9 350 aa11.19□□□□□ -0.62
LIMS1-201ENST00000332345 OR10J5Q8NHC4 309 aa11.19□□□□□ -0.62
LIMS1-201ENST00000332345 KCTD12Q96CX2 325 aaKnown RBP11.19□□□□□ -0.62
LIMS1-201ENST00000332345 S100A16Q96FQ6 103 aaKnown RBP11.19□□□□□ -0.62
LIMS1-201ENST00000332345 CITED1Q99966 193 aa11.19□□□□□ -0.62
LIMS1-201ENST00000332345 DCSTAMPQ9H295 470 aa11.19□□□□□ -0.62
LIMS1-201ENST00000332345 ZNF230Q9UIE0 474 aaPredicted RBP11.19□□□□□ -0.62
LIMS1-201ENST00000332345 MOB4Q9Y3A3 225 aa11.19□□□□□ -0.62
LIMS1-201ENST00000332345 TRAV18A0A075B6X5 111 aa11.18□□□□□ -0.62
LIMS1-201ENST00000332345 IGHV3-72A0A0B4J1Y9 119 aa11.18□□□□□ -0.62
LIMS1-201ENST00000332345 BET1O15155 118 aa11.18□□□□□ -0.62
LIMS1-201ENST00000332345 ST8SIA5O15466 376 aa11.18□□□□□ -0.62
LIMS1-201ENST00000332345 MOSP00540 346 aa11.18□□□□□ -0.62
LIMS1-201ENST00000332345 TFAP2AP05549 437 aa11.18□□□□□ -0.62
LIMS1-201ENST00000332345 GSTT2P0CG29 244 aa11.18□□□□□ -0.62
LIMS1-201ENST00000332345 GSTT2BP0CG30 244 aa11.18□□□□□ -0.62
LIMS1-201ENST00000332345 GNG2P59768 71 aa11.18□□□□□ -0.62
LIMS1-201ENST00000332345 SRSF4Q08170 494 aaKnown RBP11.18□□□□□ -0.62
LIMS1-201ENST00000332345 ABCA11PQ4W5N1 156 aa11.18□□□□□ -0.62
LIMS1-201ENST00000332345 GPR107Q5VW38 600 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms