RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 GNB2P62879 340 aa12.3□□□□□ -0.44
SNX20-202ENST00000330943 RAC1P63000 192 aa12.3□□□□□ -0.44
SNX20-202ENST00000330943 RPP25LQ8N5L8 163 aaKnown RBP12.3□□□□□ -0.44
SNX20-202ENST00000330943 MRPL30Q8TCC3 161 aaKnown RBP12.3□□□□□ -0.44
SNX20-202ENST00000330943 IL1F10Q8WWZ1 152 aa12.3□□□□□ -0.44
SNX20-202ENST00000330943 ZNF845Q96IR2 970 aaPredicted RBP12.3□□□□□ -0.44
SNX20-202ENST00000330943 PHF7Q9BWX1 381 aaPredicted RBP12.3□□□□□ -0.44
SNX20-202ENST00000330943 FGF23Q9GZV9 251 aaPredicted RBP12.3□□□□□ -0.44
SNX20-202ENST00000330943 OR51I2Q9H344 312 aa12.3□□□□□ -0.44
SNX20-202ENST00000330943 SLC25A22Q9H936 323 aa12.3□□□□□ -0.44
SNX20-202ENST00000330943 PROK2Q9HC23 129 aa12.3□□□□□ -0.44
SNX20-202ENST00000330943 OR2W1Q9Y3N9 320 aa12.3□□□□□ -0.44
SNX20-202ENST00000330943 SLC25A6P12236 298 aa12.3□□□□□ -0.44
SNX20-202ENST00000330943 ZNF16P17020 682 aaPredicted RBP12.3□□□□□ -0.44
SNX20-202ENST00000330943 TNFRSF9Q07011 255 aa12.3□□□□□ -0.44
SNX20-202ENST00000330943 PRDX4Q13162 271 aa12.3□□□□□ -0.44
SNX20-202ENST00000330943 Q8NFD4 153 aa12.3□□□□□ -0.44
SNX20-202ENST00000330943 OR10J5Q8NHC4 309 aa12.3□□□□□ -0.44
SNX20-202ENST00000330943 TAF15Q92804 592 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNX20-202ENST00000330943 CLDN23Q96B33 292 aa12.3□□□□□ -0.44
SNX20-202ENST00000330943 SNHG12Q9BXW3 62 aa12.3□□□□□ -0.44
SNX20-202ENST00000330943 CBLN4Q9NTU7 201 aa12.3□□□□□ -0.44
SNX20-202ENST00000330943 DMXL1Q9Y485 3027 aa12.29□□□□□ -0.44
SNX20-202ENST00000330943 PSMB3P49720 205 aa12.29□□□□□ -0.44
SNX20-202ENST00000330943 PDLIM4P50479 330 aa12.29□□□□□ -0.44
SNX20-202ENST00000330943 ACSF3Q4G176 576 aaPredicted RBP12.29□□□□□ -0.44
SNX20-202ENST00000330943 OR8G2PQ6IF36 304 aa12.29□□□□□ -0.44
SNX20-202ENST00000330943 OR5T1Q8NG75 326 aa12.29□□□□□ -0.44
SNX20-202ENST00000330943 SF3B5Q9BWJ5 86 aaKnown RBP12.29□□□□□ -0.44
SNX20-202ENST00000330943 MTCH1Q9NZJ7 389 aa12.29□□□□□ -0.44
SNX20-202ENST00000330943 ARHGAP21Q5T5U3 1957 aa12.29□□□□□ -0.44
SNX20-202ENST00000330943 DCHS1Q96JQ0 3298 aa12.29□□□□□ -0.44
SNX20-202ENST00000330943 B4E171 279 aa12.29□□□□□ -0.44
SNX20-202ENST00000330943 TRAPPC2LH3BP13 241 aa12.29□□□□□ -0.44
SNX20-202ENST00000330943 HS3ST1O14792 307 aa12.29□□□□□ -0.44
SNX20-202ENST00000330943 IGHV3-9P01782 118 aa12.29□□□□□ -0.44
SNX20-202ENST00000330943 TSPAN7P41732 249 aa12.29□□□□□ -0.44
SNX20-202ENST00000330943 IQCJQ1A5X6 159 aa12.29□□□□□ -0.44
SNX20-202ENST00000330943 ZNF324BQ6AW86 544 aaPredicted RBP12.29□□□□□ -0.44
SNX20-202ENST00000330943 CYB5R2Q6BCY4 276 aa12.29□□□□□ -0.44
SNX20-202ENST00000330943 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.29□□□□□ -0.44
SNX20-202ENST00000330943 MYPOPQ86VE0 399 aaPredicted RBP12.29□□□□□ -0.44
SNX20-202ENST00000330943 OR4F5Q8NH21 305 aa12.29□□□□□ -0.44
SNX20-202ENST00000330943 GATAD1Q8WUU5 269 aa12.29□□□□□ -0.44
SNX20-202ENST00000330943 RDH5Q92781 318 aa12.29□□□□□ -0.44
SNX20-202ENST00000330943 OR4F4Q96R69 305 aa12.29□□□□□ -0.44
SNX20-202ENST00000330943 A0A1W2PR80 420 aa12.28□□□□□ -0.44
SNX20-202ENST00000330943 IGKV1-5P01602 117 aa12.28□□□□□ -0.44
SNX20-202ENST00000330943 FGF5P12034 268 aa12.28□□□□□ -0.44
SNX20-202ENST00000330943 BTF3P20290 206 aaKnown RBP12.28□□□□□ -0.44
SNX20-202ENST00000330943 RAC3P60763 192 aa12.28□□□□□ -0.44
SNX20-202ENST00000330943 PCBD1P61457 104 aa12.28□□□□□ -0.44
SNX20-202ENST00000330943 PCOLCEQ15113 449 aa12.28□□□□□ -0.44
SNX20-202ENST00000330943 ACTL10Q5JWF8 245 aa12.28□□□□□ -0.44
SNX20-202ENST00000330943 TEX38Q6PEX7 206 aa12.28□□□□□ -0.44
SNX20-202ENST00000330943 YRDCQ86U90 279 aaKnown RBP12.28□□□□□ -0.44
SNX20-202ENST00000330943 OR2T10Q8NGZ9 312 aa12.28□□□□□ -0.44
SNX20-202ENST00000330943 THOC3Q96J01 351 aaKnown RBP12.28□□□□□ -0.44
SNX20-202ENST00000330943 PLA2G3Q9NZ20 509 aa12.28□□□□□ -0.44
SNX20-202ENST00000330943 PPP1R3CQ9UQK1 317 aa12.28□□□□□ -0.44
SNX20-202ENST00000330943 CACNA1HO95180 2353 aa12.28□□□□□ -0.44
SNX20-202ENST00000330943 C3orf80F5H4A9 247 aa12.28□□□□□ -0.44
SNX20-202ENST00000330943 SLC38A11Q08AI6 406 aa12.28□□□□□ -0.44
SNX20-202ENST00000330943 CPEB3Q8NE35 698 aaKnown RBP12.28□□□□□ -0.44
SNX20-202ENST00000330943 TMEM68Q96MH6 324 aa12.28□□□□□ -0.44
SNX20-202ENST00000330943 CXCL13O43927 109 aa12.27□□□□□ -0.44
SNX20-202ENST00000330943 SCGB1D1O95968 90 aa12.27□□□□□ -0.44
SNX20-202ENST00000330943 CARD18P57730 90 aa12.27□□□□□ -0.44
SNX20-202ENST00000330943 SLC23A3Q6PIS1 610 aa12.27□□□□□ -0.44
SNX20-202ENST00000330943 OR10V1Q8NGI7 309 aa12.27□□□□□ -0.44
SNX20-202ENST00000330943 SPSB4Q96A44 273 aa12.27□□□□□ -0.44
SNX20-202ENST00000330943 ZNF488Q96MN9 340 aa12.27□□□□□ -0.44
SNX20-202ENST00000330943 OR1A1Q9P1Q5 309 aa12.27□□□□□ -0.44
SNX20-202ENST00000330943 ZNF716A6NP11 495 aa12.27□□□□□ -0.45
SNX20-202ENST00000330943 TMEM250H0YL14 139 aa12.27□□□□□ -0.45
SNX20-202ENST00000330943 SYNGR1O43759 233 aa12.27□□□□□ -0.45
SNX20-202ENST00000330943 SOX15O60248 233 aa12.27□□□□□ -0.45
SNX20-202ENST00000330943 PDGFBP01127 241 aaPredicted RBP12.27□□□□□ -0.45
SNX20-202ENST00000330943 GYPAP02724 150 aa12.27□□□□□ -0.45
SNX20-202ENST00000330943 CCL2P13500 99 aa12.27□□□□□ -0.45
SNX20-202ENST00000330943 ACOT6Q3I5F7 207 aaPredicted RBP12.27□□□□□ -0.45
SNX20-202ENST00000330943 ACSM6Q6P461 480 aa12.27□□□□□ -0.45
SNX20-202ENST00000330943 CENPVQ7Z7K6 275 aaPredicted RBP12.27□□□□□ -0.45
SNX20-202ENST00000330943 MKXQ8IYA7 352 aa12.27□□□□□ -0.45
SNX20-202ENST00000330943 PRR18Q8N4B5 295 aa12.27□□□□□ -0.45
SNX20-202ENST00000330943 CADM4Q8NFZ8 388 aa12.27□□□□□ -0.45
SNX20-202ENST00000330943 PSMF1Q92530 271 aa12.27□□□□□ -0.45
SNX20-202ENST00000330943 C1QTNF5Q9BXJ0 243 aa12.27□□□□□ -0.45
SNX20-202ENST00000330943 CACNA1GO43497 2377 aa12.27□□□□□ -0.45
SNX20-202ENST00000330943 GJE1A6NN92 205 aa12.27□□□□□ -0.45
SNX20-202ENST00000330943 LSM10Q969L4 123 aaKnown RBP12.27□□□□□ -0.45
SNX20-202ENST00000330943 GPR35Q9HC97 309 aa12.27□□□□□ -0.45
SNX20-202ENST00000330943 OR6C3Q9NZP0 311 aa12.27□□□□□ -0.45
SNX20-202ENST00000330943 RBM7Q9Y580 266 aaKnown RBP12.27□□□□□ -0.45
SNX20-202ENST00000330943 NBEAQ8NFP9 2946 aa12.26□□□□□ -0.45
SNX20-202ENST00000330943 TRAV39A0A0B4J263 110 aa12.26□□□□□ -0.45
SNX20-202ENST00000330943 GALR2O43603 387 aaPredicted RBP12.26□□□□□ -0.45
SNX20-202ENST00000330943 CCKARP32238 428 aa12.26□□□□□ -0.45
SNX20-202ENST00000330943 SSR4P51571 173 aa12.26□□□□□ -0.45
SNX20-202ENST00000330943 LPAL2Q16609 132 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms