RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 PGLYRP1O75594 196 aaPredicted RBP6.74□□□□□ -1.33
VMA21-201ENST00000330374 NUTF2P61970 127 aaKnown RBP6.74□□□□□ -1.33
VMA21-201ENST00000330374 PSG4Q00888 419 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 BAXQ07812 192 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 PNRC1Q12796 327 aaPredicted RBP6.74□□□□□ -1.33
VMA21-201ENST00000330374 TMEM211Q6ICI0 200 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 TCEAL6Q6IPX3 200 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 TEX38Q6PEX7 206 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 SNHG12Q9BXW3 62 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 CRIM1Q9NZV1 1036 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 VAX2Q9UIW0 290 aa6.74□□□□□ -1.33
VMA21-201ENST00000330374 DOCK10Q96BY6 2186 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 DVL1O14640 695 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 TMEM11P17152 192 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 OTX1P32242 354 aaPredicted RBP6.73□□□□□ -1.33
VMA21-201ENST00000330374 FUT6P51993 359 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 RND2P52198 227 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 CEACAM16Q2WEN9 425 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 OR8G5Q8NG78 346 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 OR2V1Q8NHB1 315 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 TRBV24-1A0A075B6N3 115 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 IGKV1-6A0A0C4DH72 117 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 SH2D7A6NKC9 451 aaPredicted RBP6.73□□□□□ -1.33
VMA21-201ENST00000330374 SYNGR3O43761 229 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 WDR1O75083 606 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 TNFRSF9Q07011 255 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 RAB35Q15286 201 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 SPINK9Q5DT21 86 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 OR56B2PQ8NGI1 322 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 OR4C12Q96R67 309 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 SRD5A3Q9H8P0 318 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 TP53TG5Q9Y2B4 290 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 RNF115Q9Y4L5 304 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 KNTC1P50748 2209 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 CLDN1O95832 211 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 CRYAAP02489 173 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 CD27P26842 260 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 UBE2G2P60604 165 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 ZXDAP98168 799 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 FOXO1Q12778 655 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 BTNL3Q6UXE8 466 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 ZIC4Q8N9L1 334 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 OR10V1Q8NGI7 309 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 IL22RA2Q969J5 263 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 CDH20Q9HBT6 801 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 DMDP11532 3685 aa6.73□□□□□ -1.33
VMA21-201ENST00000330374 TRAPPC6AO75865 159 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 IFNA1P01562 189 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 UCP1P25874 307 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 C10orf128Q5T292 105 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 FAM27BQ5VT28 67 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 C20orf204Q6ZNR8 217 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 TMPRSS7Q7RTY8 843 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 TMEM54Q969K7 222 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 NEU1Q99519 415 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 C1orf43Q9BWL3 253 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 NAT8Q9UHE5 227 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 A0A1W2PR77 199 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 MKRN2OSH3BPM6 223 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 TP53I11O14683 189 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 SYNGR2O43760 224 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 CRYGSP22914 178 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 CD81P60033 236 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 RPL23P62829 140 aaKnown RBP6.72□□□□□ -1.33
VMA21-201ENST00000330374 SLC25A53Q5H9E4 307 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 FAM78BQ5VT40 261 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 RHBDD2Q6NTF9 364 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 AAED1Q7RTV5 226 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 MRPL30Q8TCC3 161 aaKnown RBP6.72□□□□□ -1.33
VMA21-201ENST00000330374 TMEM18Q96B42 140 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 CDCA3Q99618 268 aaPredicted RBP6.72□□□□□ -1.33
VMA21-201ENST00000330374 PARLQ9H300 379 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 OR51I2Q9H344 312 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 OR1A1Q9P1Q5 309 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 CHCHD2Q9Y6H1 151 aaPredicted RBP6.72□□□□□ -1.33
VMA21-201ENST00000330374 CXCL13O43927 109 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 IGKV1D-33P01593 117 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 IGKV1-33P01594 117 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 COX5BP10606 129 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 F2RP25116 425 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 GTF3C1Q12789 2109 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 C16orf54Q6UWD8 224 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 ZNF295-AS1Q8N0V1 137 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 TMEM256Q8N2U0 113 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 C11orf44Q8N8P7 122 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 ADGRG7Q96K78 797 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 NOL4LQ96MY1 436 aaPredicted RBP6.72□□□□□ -1.33
VMA21-201ENST00000330374 TMEM204Q9BSN7 226 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 EXPH5Q8NEV8 1989 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 RBMXL2O75526 392 aaKnown RBP6.72□□□□□ -1.33
VMA21-201ENST00000330374 PFN1P07737 140 aaKnown RBP6.72□□□□□ -1.33
VMA21-201ENST00000330374 FGF5P12034 268 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 MEF2BQ02080 365 aaPredicted RBP6.72□□□□□ -1.33
VMA21-201ENST00000330374 MRGPRGQ86SM5 289 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 HAPLN4Q86UW8 402 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 SLC25A45Q8N413 288 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 ZNF525Q8N782 197 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 SDSLQ96GA7 329 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 FSCN3Q9NQT6 498 aa6.72□□□□□ -1.33
VMA21-201ENST00000330374 C1QTNF9BB2RNN3 333 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms