RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 KDF1Q8NAX2 398 aaPredicted RBP12.23□□□□□ -0.45
TPM3-206ENST00000330188 PRR7Q8TB68 274 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 GALMQ96C23 342 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 SLC35B3Q9H1N7 401 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 SMCO4Q9NRQ5 59 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 UFSP2Q9NUQ7 469 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 MLXQ9UH92 298 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 PROCRQ9UNN8 238 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 PRELID1Q9Y255 219 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 INTS1Q8N201 2190 aaKnown RBP12.23□□□□□ -0.45
TPM3-206ENST00000330188 MEX3AA1L020 520 aaKnown RBP12.23□□□□□ -0.45
TPM3-206ENST00000330188 COLCA2A8K830 154 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 IAPPP10997 89 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 TAS2R30P59541 319 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 AWAT1Q58HT5 328 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 MBNL2Q5VZF2 373 aaKnown RBP12.23□□□□□ -0.45
TPM3-206ENST00000330188 FAM53AQ6NSI3 398 aaPredicted RBP12.23□□□□□ -0.45
TPM3-206ENST00000330188 SEM1Q6ZVN7 128 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 C5orf30Q96GV9 206 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 RARRES2Q99969 163 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 ESRP2Q9H6T0 727 aaKnown RBP12.23□□□□□ -0.45
TPM3-206ENST00000330188 METRNQ9UJH8 293 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 ZNF891A8MT65 544 aaPredicted RBP12.22□□□□□ -0.45
TPM3-206ENST00000330188 RNF212BA8MTL3 300 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 PTBP3O95758 552 aaKnown RBP12.22□□□□□ -0.45
TPM3-206ENST00000330188 HBZP02008 142 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 GCH1P30793 250 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 AKR1C3P42330 323 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 BHLHA15Q7RTS1 189 aaPredicted RBP12.22□□□□□ -0.45
TPM3-206ENST00000330188 OR52L2PQ8NGH6 319 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 TOLLIPQ9H0E2 274 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 PSENENQ9NZ42 101 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 ASPMQ8IZT6 3477 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 A0A1B0GWJ7 208 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 OR5H1A6NKK0 313 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 PAX6P26367 422 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 IL2RGP31785 369 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 EIF4EBP1Q13541 118 aaPredicted RBP12.22□□□□□ -0.45
TPM3-206ENST00000330188 AKR1C8PQ5T2L2 129 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 FGFRL1Q8N441 504 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 ZBTB34Q8NCN2 500 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 SNIP1Q8TAD8 396 aaKnown RBP12.22□□□□□ -0.45
TPM3-206ENST00000330188 CLCC1Q96S66 551 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 OR2D2Q9H210 308 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 SMDT1Q9H4I9 107 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 KCNJ16Q9NPI9 418 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 RPS10P5Q9NQ39 176 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 RNF150Q9ULK6 438 aa12.22□□□□□ -0.45
TPM3-206ENST00000330188 CHD3Q12873 2000 aaKnown RBP12.21□□□□□ -0.45
TPM3-206ENST00000330188 ZNF318Q5VUA4 2279 aa12.21□□□□□ -0.45
TPM3-206ENST00000330188 C7orf77A4D0Y5 90 aa12.21□□□□□ -0.45
TPM3-206ENST00000330188 MBD3L4A6NDZ8 208 aaPredicted RBP12.21□□□□□ -0.45
TPM3-206ENST00000330188 BTBD17A6NE02 478 aa12.21□□□□□ -0.45
TPM3-206ENST00000330188 MBD3L3A6NE82 208 aaPredicted RBP12.21□□□□□ -0.45
TPM3-206ENST00000330188 RBFOX3A6NFN3 312 aa12.21□□□□□ -0.45
TPM3-206ENST00000330188 MBD3L5A6NJ08 208 aaPredicted RBP12.21□□□□□ -0.45
TPM3-206ENST00000330188 NDUFA2O43678 99 aa12.21□□□□□ -0.45
TPM3-206ENST00000330188 CRYBA1P05813 215 aa12.21□□□□□ -0.45
TPM3-206ENST00000330188 SNRNP70P08621 437 aaKnown RBP12.21□□□□□ -0.45
TPM3-206ENST00000330188 OR13C7P0DN81 318 aa12.21□□□□□ -0.45
TPM3-206ENST00000330188 RPL30P62888 115 aaKnown RBP12.21□□□□□ -0.45
TPM3-206ENST00000330188 COL10A1Q03692 680 aa12.21□□□□□ -0.45
TPM3-206ENST00000330188 ARL16Q0P5N6 197 aa12.21□□□□□ -0.45
TPM3-206ENST00000330188 P2RY6Q15077 328 aa12.21□□□□□ -0.45
TPM3-206ENST00000330188 AVPI1Q5T686 147 aa12.21□□□□□ -0.45
TPM3-206ENST00000330188 HAPLN4Q86UW8 402 aa12.21□□□□□ -0.45
TPM3-206ENST00000330188 ZADH2Q8N4Q0 377 aa12.21□□□□□ -0.45
TPM3-206ENST00000330188 C15orf54Q8N8G6 183 aa12.21□□□□□ -0.45
TPM3-206ENST00000330188 MBD3L2Q8NHZ7 208 aaPredicted RBP12.21□□□□□ -0.45
TPM3-206ENST00000330188 MRGPRDQ8TDS7 321 aa12.21□□□□□ -0.45
TPM3-206ENST00000330188 SAV1Q9H4B6 383 aaPredicted RBP12.21□□□□□ -0.45
TPM3-206ENST00000330188 KIAA1456Q9P272 454 aa12.21□□□□□ -0.45
TPM3-206ENST00000330188 SLC25A15Q9Y619 301 aa12.21□□□□□ -0.45
TPM3-206ENST00000330188 IFNL4K9M1U5 179 aa12.2□□□□□ -0.46
TPM3-206ENST00000330188 IFNA5P01569 189 aa12.2□□□□□ -0.46
TPM3-206ENST00000330188 GABRA2P47869 451 aa12.2□□□□□ -0.46
TPM3-206ENST00000330188 SMIM21Q3B7S5 101 aa12.2□□□□□ -0.46
TPM3-206ENST00000330188 THNSL2Q86YJ6 484 aa12.2□□□□□ -0.46
TPM3-206ENST00000330188 HIPK2Q9H2X6 1198 aa12.2□□□□□ -0.46
TPM3-206ENST00000330188 MMP24Q9Y5R2 645 aa12.2□□□□□ -0.46
TPM3-206ENST00000330188 M0R036 132 aa12.2□□□□□ -0.46
TPM3-206ENST00000330188 RAMP3O60896 148 aa12.2□□□□□ -0.46
TPM3-206ENST00000330188 METTL15P1P0C7V9 234 aa12.2□□□□□ -0.46
TPM3-206ENST00000330188 GLIPR1P48060 266 aa12.2□□□□□ -0.46
TPM3-206ENST00000330188 KRBOX4Q5JUW0 171 aa12.2□□□□□ -0.46
TPM3-206ENST00000330188 DPPA3Q6W0C5 159 aa12.2□□□□□ -0.46
TPM3-206ENST00000330188 C1orf174Q8IYL3 243 aa12.2□□□□□ -0.46
TPM3-206ENST00000330188 ZNF808Q8N4W9 903 aaPredicted RBP12.2□□□□□ -0.46
TPM3-206ENST00000330188 ZNF525Q8N782 197 aa12.2□□□□□ -0.46
TPM3-206ENST00000330188 FAM169BQ8N8A8 192 aa12.2□□□□□ -0.46
TPM3-206ENST00000330188 C20orf24Q9BUV8 137 aa12.2□□□□□ -0.46
TPM3-206ENST00000330188 COA4Q9NYJ1 87 aa12.2□□□□□ -0.46
TPM3-206ENST00000330188 RAB13P51153 203 aa12.19□□□□□ -0.46
TPM3-206ENST00000330188 MSMPQ1L6U9 139 aa12.19□□□□□ -0.46
TPM3-206ENST00000330188 SLC25A24Q6NUK1 477 aa12.19□□□□□ -0.46
TPM3-206ENST00000330188 BEND4Q6ZU67 534 aa12.19□□□□□ -0.46
TPM3-206ENST00000330188 TPRX1Q8N7U7 411 aa12.19□□□□□ -0.46
TPM3-206ENST00000330188 OR13A1Q8NGR1 328 aa12.19□□□□□ -0.46
TPM3-206ENST00000330188 LRRC29Q8WV35 223 aa12.19□□□□□ -0.46
TPM3-206ENST00000330188 C14orf79Q96F83 325 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms