RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 GAPDHP04406 335 aaKnown RBP12.38□□□□□ -0.43
TSFM-201ENST00000323833 SNRNP70P08621 437 aaKnown RBP12.38□□□□□ -0.43
TSFM-201ENST00000323833 SCAND1P57086 179 aa12.38□□□□□ -0.43
TSFM-201ENST00000323833 DMRTA1Q5VZB9 504 aa12.38□□□□□ -0.43
TSFM-201ENST00000323833 MOB3BQ86TA1 216 aa12.38□□□□□ -0.43
TSFM-201ENST00000323833 ANKRD13BQ86YJ7 626 aa12.38□□□□□ -0.43
TSFM-201ENST00000323833 CROCCP3Q8IVE0 287 aa12.38□□□□□ -0.43
TSFM-201ENST00000323833 IZUMO1Q8IYV9 350 aa12.38□□□□□ -0.43
TSFM-201ENST00000323833 OR8H3Q8N146 312 aa12.38□□□□□ -0.43
TSFM-201ENST00000323833 OR4C13Q8NGP0 309 aa12.38□□□□□ -0.43
TSFM-201ENST00000323833 RTN4IP1Q8WWV3 396 aaPredicted RBP12.38□□□□□ -0.43
TSFM-201ENST00000323833 NPFFR1Q9GZQ6 430 aa12.38□□□□□ -0.43
TSFM-201ENST00000323833 PARP12Q9H0J9 701 aaKnown RBP12.38□□□□□ -0.43
TSFM-201ENST00000323833 OR1A1Q9P1Q5 309 aa12.38□□□□□ -0.43
TSFM-201ENST00000323833 SLC23A1Q9UHI7 598 aa12.38□□□□□ -0.43
TSFM-201ENST00000323833 SPATA2Q9UM82 520 aa12.38□□□□□ -0.43
TSFM-201ENST00000323833 IGHV3-72A0A0B4J1Y9 119 aa12.37□□□□□ -0.43
TSFM-201ENST00000323833 IGKV1-6A0A0C4DH72 117 aa12.37□□□□□ -0.43
TSFM-201ENST00000323833 FAM90A9PA6NNJ1 464 aa12.37□□□□□ -0.43
TSFM-201ENST00000323833 TRDCB7Z8K6 153 aa12.37□□□□□ -0.43
TSFM-201ENST00000323833 SRSF4Q08170 494 aaKnown RBP12.37□□□□□ -0.43
TSFM-201ENST00000323833 CTF1Q16619 201 aa12.37□□□□□ -0.43
TSFM-201ENST00000323833 ZNF260Q3ZCT1 412 aa12.37□□□□□ -0.43
TSFM-201ENST00000323833 LY6G6FQ5SQ64 297 aa12.37□□□□□ -0.43
TSFM-201ENST00000323833 STEAP3Q658P3 488 aa12.37□□□□□ -0.43
TSFM-201ENST00000323833 GPR141Q7Z602 305 aa12.37□□□□□ -0.43
TSFM-201ENST00000323833 ODF3L1Q8IXM7 274 aa12.37□□□□□ -0.43
TSFM-201ENST00000323833 SLC25A46Q96AG3 418 aa12.37□□□□□ -0.43
TSFM-201ENST00000323833 RBMXL1Q96E39 390 aaKnown RBP12.37□□□□□ -0.43
TSFM-201ENST00000323833 SLC25A33Q9BSK2 321 aa12.37□□□□□ -0.43
TSFM-201ENST00000323833 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.37□□□□□ -0.43
TSFM-201ENST00000323833 TMEM235A6NFC5 223 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 ST8SIA5O15466 376 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 HSPA12AO43301 675 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 TMEM127O75204 238 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 SCGNO76038 276 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 GABARAPO95166 117 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 GSTT2P0CG29 244 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 GSTT2BP0CG30 244 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 FAM106CPP0CH98 169 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 TALDO1P37837 337 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 CEACAM6P40199 344 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 KIR2DS4P43632 304 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 ZNF137PP52743 207 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 PROK1P58294 105 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 KRTAP10-3P60369 221 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 BLCAPP62952 87 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 HES1Q14469 280 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 HABP2Q14520 560 aaPredicted RBP12.36□□□□□ -0.43
TSFM-201ENST00000323833 HNF4GQ14541 408 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 HERPUD1Q15011 391 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 ARL6IP1Q15041 203 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 HACD4Q5VWC8 232 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 Q6ZS46 218 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 THNSL2Q86YJ6 484 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 TGIF2LXQ8IUE1 241 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 OR2AK2Q8NG84 335 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 NUDCD2Q8WVJ2 157 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 WFDC12Q8WWY7 111 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 PHF21AQ96BD5 680 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 RBM14Q96PK6 669 aaKnown RBP12.36□□□□□ -0.43
TSFM-201ENST00000323833 RANBP3Q9H6Z4 567 aaPredicted RBP12.36□□□□□ -0.43
TSFM-201ENST00000323833 ZNF702PQ9H963 129 aa12.36□□□□□ -0.43
TSFM-201ENST00000323833 TRAV18A0A075B6X5 111 aa12.35□□□□□ -0.43
TSFM-201ENST00000323833 IGKV1D-8A0A087WSZ0 117 aa12.35□□□□□ -0.43
TSFM-201ENST00000323833 FABP7O15540 132 aa12.35□□□□□ -0.43
TSFM-201ENST00000323833 OR2F2O95006 317 aa12.35□□□□□ -0.43
TSFM-201ENST00000323833 IGKV1D-33P01593 117 aa12.35□□□□□ -0.43
TSFM-201ENST00000323833 IGKV1-33P01594 117 aa12.35□□□□□ -0.43
TSFM-201ENST00000323833 GSTP1P09211 210 aaKnown RBP12.35□□□□□ -0.43
TSFM-201ENST00000323833 ZBTB25P24278 435 aa12.35□□□□□ -0.43
TSFM-201ENST00000323833 OR3A3P47888 321 aa12.35□□□□□ -0.43
TSFM-201ENST00000323833 IGSF11Q5DX21 431 aa12.35□□□□□ -0.43
TSFM-201ENST00000323833 C16orf82Q7Z2V1 217 aa12.35□□□□□ -0.43
TSFM-201ENST00000323833 DTX3Q8N9I9 347 aa12.35□□□□□ -0.43
TSFM-201ENST00000323833 OR4A4PQ8NGN8 299 aa12.35□□□□□ -0.43
TSFM-201ENST00000323833 OR2T6Q8NHC8 308 aa12.35□□□□□ -0.43
TSFM-201ENST00000323833 IFI27L2Q9H2X8 130 aa12.35□□□□□ -0.43
TSFM-201ENST00000323833 SAA2-SAA4A0A096LPE2 208 aa12.34□□□□□ -0.43
TSFM-201ENST00000323833 SH2D7A6NKC9 451 aaPredicted RBP12.34□□□□□ -0.43
TSFM-201ENST00000323833 ZNF736B4DX44 427 aaPredicted RBP12.34□□□□□ -0.43
TSFM-201ENST00000323833 LANCL1O43813 399 aa12.34□□□□□ -0.43
TSFM-201ENST00000323833 SSX5O60225 188 aa12.34□□□□□ -0.43
TSFM-201ENST00000323833 LPLP06858 475 aa12.34□□□□□ -0.43
TSFM-201ENST00000323833 SAA2P0DJI9 122 aaPredicted RBP12.34□□□□□ -0.43
TSFM-201ENST00000323833 TMEM11P17152 192 aa12.34□□□□□ -0.43
TSFM-201ENST00000323833 GNG2P59768 71 aa12.34□□□□□ -0.43
TSFM-201ENST00000323833 KIR2DS1Q14954 304 aa12.34□□□□□ -0.43
TSFM-201ENST00000323833 UBE2NLQ5JXB2 153 aa12.34□□□□□ -0.43
TSFM-201ENST00000323833 SHISA2Q6UWI4 295 aa12.34□□□□□ -0.43
TSFM-201ENST00000323833 SAMD12Q8N8I0 201 aa12.34□□□□□ -0.43
TSFM-201ENST00000323833 ABHD14BQ96IU4 210 aa12.34□□□□□ -0.43
TSFM-201ENST00000323833 ST6GALNAC5Q9BVH7 336 aa12.34□□□□□ -0.43
TSFM-201ENST00000323833 PRSS22Q9GZN4 317 aa12.34□□□□□ -0.43
TSFM-201ENST00000323833 C11orf54Q9H0W9 315 aaPredicted RBP12.34□□□□□ -0.43
TSFM-201ENST00000323833 DIABLOQ9NR28 239 aa12.34□□□□□ -0.43
TSFM-201ENST00000323833 TET2Q6N021 2002 aaPredicted RBP12.33□□□□□ -0.43
TSFM-201ENST00000323833 BET1O15155 118 aa12.33□□□□□ -0.44
TSFM-201ENST00000323833 TXNL1O43396 289 aa12.33□□□□□ -0.44
TSFM-201ENST00000323833 AMY1AP04745 511 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms