RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 RBMY1A1P0DJD3 496 aaKnown RBP8.58□□□□□ -1.04
COL12A1-201ENST00000322507 RBMY1CP0DJD4 496 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 TTC9CQ8N5M4 171 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 SIRT5Q9NXA8 310 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 DHHO43323 396 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 CD3DP04234 171 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 C12orf73Q69YU5 71 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 SRSF10O75494 262 aaKnown RBP8.58□□□□□ -1.04
COL12A1-201ENST00000322507 OR4D9Q8NGE8 314 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 TMEM186Q96B77 213 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 TMEM140Q9NV12 185 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 NKX2-8O15522 239 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 KBTBD11O94819 623 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 IGHV4-34P06331 123 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 FMODQ06828 376 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 SLC25A30Q5SVS4 291 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 C10orf128Q5T292 105 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 PTPMT1Q8WUK0 201 aaPredicted RBP8.58□□□□□ -1.04
COL12A1-201ENST00000322507 A0A1W2PQM1 296 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 COL8A1P27658 744 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 ISXQ2M1V0 245 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 TPTE2P1Q5T6R2 138 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 MPC1Q9Y5U8 109 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 CCL11P51671 97 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 ACSM5Q6NUN0 579 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 OLIG3Q7RTU3 272 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 PTX4Q96A99 478 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 P2RX4Q99571 388 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 GTSF1LQ9H1H1 148 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 FGF22Q9HCT0 170 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 ZNF880Q6PDB4 577 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 BCL2P10415 239 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 HIST1H1AQ02539 215 aaPredicted RBP8.58□□□□□ -1.04
COL12A1-201ENST00000322507 EML6Q6ZMW3 1958 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 THADAQ6YHU6 1953 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 CASP8AP2Q9UKL3 1982 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 IGLV3-16A0A075B6K0 115 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 TRAV9-1A0A075B6T8 112 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 OR3A4PP47883 348 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 SLC37A1P57057 533 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 TMEM99Q8N816 258 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 KCNS1Q96KK3 526 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 CLN8Q9UBY8 286 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 PGPEP1LA6NFU8 196 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 NDUFB3O43676 98 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 GABRA1P14867 456 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 OR10G4Q8NGN3 311 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 OR10G9Q8NGN4 311 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 OR10G7Q8NGN6 311 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 MMP25Q9NPA2 562 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 DLEU1O43261 78 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 SEMG1P04279 462 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 GBGT1Q8N5D6 347 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 SGMS2Q8NHU3 365 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 SNRNP40Q96DI7 357 aaKnown RBP8.57□□□□□ -1.04
COL12A1-201ENST00000322507 C1RLQ9NZP8 487 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 A0A1W2PR80 420 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 hADV38S2A0JD32 116 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 RPS20P60866 119 aaKnown RBP8.57□□□□□ -1.04
COL12A1-201ENST00000322507 OR5AN1Q8NGI8 311 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 TRAV38-1A0A0B4J264 116 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 TMEM250H0YL14 139 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 LINC01559Q495D7 138 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 ITGB1BP1O14713 200 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 SPINK4O60575 86 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 FCN3O75636 299 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 CXCL10P02778 98 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 UBE2V1Q13404 147 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 TRAV5A0A0B4J249 113 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 HSPB1P04792 205 aaKnown RBP8.57□□□□□ -1.04
COL12A1-201ENST00000322507 C5orf47Q569G3 176 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 BEX4Q9NWD9 120 aaPredicted RBP8.57□□□□□ -1.04
COL12A1-201ENST00000322507 IAPPP10997 89 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 RTN4RL1Q86UN2 441 aaPredicted RBP8.57□□□□□ -1.04
COL12A1-201ENST00000322507 SIGLEC11Q96RL6 698 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 HMGA2P52926 109 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 ACSF3Q4G176 576 aaPredicted RBP8.57□□□□□ -1.04
COL12A1-201ENST00000322507 FBXO17Q96EF6 278 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 CLEC1BQ9P126 229 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 LRP12Q9Y561 859 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 LINC00587B1AMM8 73 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 PYCARD-AS1I3L0S3 204 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 GSTZ1O43708 216 aaPredicted RBP8.57□□□□□ -1.04
COL12A1-201ENST00000322507 PITX3O75364 302 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 NKX2-2O95096 273 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 RCC1P18754 421 aaPredicted RBP8.57□□□□□ -1.04
COL12A1-201ENST00000322507 DHRS2Q13268 280 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 SAMD5Q5TGI4 173 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 PTOV1Q86YD1 416 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 FAM219AQ8IW50 185 aa8.57□□□□□ -1.04
COL12A1-201ENST00000322507 SLIRPQ9GZT3 109 aaKnown RBP8.57□□□□□ -1.04
COL12A1-201ENST00000322507 S1PR2O95136 353 aa8.56□□□□□ -1.04
COL12A1-201ENST00000322507 TRPM7Q96QT4 1865 aa8.56□□□□□ -1.04
COL12A1-201ENST00000322507 TCRBV16S1A1N1A0A5B0 115 aa8.56□□□□□ -1.04
COL12A1-201ENST00000322507 NPIPB6E9PJ23 425 aa8.56□□□□□ -1.04
COL12A1-201ENST00000322507 HPRT1P00492 218 aa8.56□□□□□ -1.04
COL12A1-201ENST00000322507 PRR35P0CG20 571 aa8.56□□□□□ -1.04
COL12A1-201ENST00000322507 SPNP16150 400 aa8.56□□□□□ -1.04
COL12A1-201ENST00000322507 PTGER1P34995 402 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms