RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 TMEM250H0YL14 139 aa15.23■□□□□ 0.03
PRKCB-202ENST00000321728 GYPAP02724 150 aa15.23■□□□□ 0.03
PRKCB-202ENST00000321728 FGF12P61328 243 aa15.23■□□□□ 0.03
PRKCB-202ENST00000321728 WDR74Q6RFH5 385 aaPredicted RBP15.23■□□□□ 0.03
PRKCB-202ENST00000321728 PCSK4Q6UW60 755 aa15.23■□□□□ 0.03
PRKCB-202ENST00000321728 CLDN23Q96B33 292 aa15.23■□□□□ 0.03
PRKCB-202ENST00000321728 ANAPC16Q96DE5 110 aa15.23■□□□□ 0.03
PRKCB-202ENST00000321728 LIFP15018 202 aa15.22■□□□□ 0.03
PRKCB-202ENST00000321728 CCNOP22674 350 aa15.22■□□□□ 0.03
PRKCB-202ENST00000321728 DSCR4P56555 118 aaPredicted RBP15.22■□□□□ 0.03
PRKCB-202ENST00000321728 SLC38A11Q08AI6 406 aa15.22■□□□□ 0.03
PRKCB-202ENST00000321728 CEACAM16Q2WEN9 425 aa15.22■□□□□ 0.03
PRKCB-202ENST00000321728 C20orf204Q6ZNR8 217 aa15.22■□□□□ 0.03
PRKCB-202ENST00000321728 CISD2Q8N5K1 135 aaKnown RBP15.22■□□□□ 0.03
PRKCB-202ENST00000321728 FOXB1Q99853 325 aa15.22■□□□□ 0.03
PRKCB-202ENST00000321728 HS3ST1O14792 307 aa15.22■□□□□ 0.03
PRKCB-202ENST00000321728 IGKV1-39P01597 117 aa15.22■□□□□ 0.03
PRKCB-202ENST00000321728 IGKV1D-39P04432 117 aa15.22■□□□□ 0.03
PRKCB-202ENST00000321728 HOXA6P31267 233 aa15.22■□□□□ 0.03
PRKCB-202ENST00000321728 CHRNA7P36544 502 aa15.22■□□□□ 0.03
PRKCB-202ENST00000321728 RPL29P47914 159 aaKnown RBP15.22■□□□□ 0.03
PRKCB-202ENST00000321728 TDGF1P3P51864 188 aa15.22■□□□□ 0.03
PRKCB-202ENST00000321728 AAED1Q7RTV5 226 aa15.22■□□□□ 0.03
PRKCB-202ENST00000321728 OR56B2PQ8NGI1 322 aa15.22■□□□□ 0.03
PRKCB-202ENST00000321728 CPT1CQ8TCG5 803 aa15.22■□□□□ 0.03
PRKCB-202ENST00000321728 PPP1R3CQ9UQK1 317 aa15.22■□□□□ 0.03
PRKCB-202ENST00000321728 PIGBOS1A0A0B4J2F0 54 aa15.21■□□□□ 0.03
PRKCB-202ENST00000321728 GGCTO75223 188 aaKnown RBP15.21■□□□□ 0.03
PRKCB-202ENST00000321728 IGFBP4P22692 258 aa15.21■□□□□ 0.03
PRKCB-202ENST00000321728 KRTAP27-1Q3LI81 207 aa15.21■□□□□ 0.03
PRKCB-202ENST00000321728 C1orf194Q5T5A4 169 aa15.21■□□□□ 0.03
PRKCB-202ENST00000321728 ZNF324BQ6AW86 544 aaPredicted RBP15.21■□□□□ 0.03
PRKCB-202ENST00000321728 KCNIP4Q6PIL6 250 aa15.21■□□□□ 0.03
PRKCB-202ENST00000321728 OR10V1Q8NGI7 309 aa15.21■□□□□ 0.03
PRKCB-202ENST00000321728 POLR3KQ9Y2Y1 108 aaPredicted RBP15.21■□□□□ 0.03
PRKCB-202ENST00000321728 DIDO1Q9BTC0 2240 aaKnown RBP15.21■□□□□ 0.03
PRKCB-202ENST00000321728 ZNF705FA8MVS1 300 aaPredicted RBP15.21■□□□□ 0.03
PRKCB-202ENST00000321728 TRAPPC2LH3BP13 241 aa15.21■□□□□ 0.03
PRKCB-202ENST00000321728 ZNF705DP0CH99 300 aaPredicted RBP15.21■□□□□ 0.03
PRKCB-202ENST00000321728 ZNF705BP0CI00 300 aaPredicted RBP15.21■□□□□ 0.03
PRKCB-202ENST00000321728 SPINK2P20155 84 aa15.21■□□□□ 0.03
PRKCB-202ENST00000321728 PRDX4Q13162 271 aa15.21■□□□□ 0.03
PRKCB-202ENST00000321728 Q8NFD4 153 aa15.21■□□□□ 0.03
PRKCB-202ENST00000321728 RDH5Q92781 318 aa15.21■□□□□ 0.03
PRKCB-202ENST00000321728 MTCH1Q9NZJ7 389 aa15.21■□□□□ 0.03
PRKCB-202ENST00000321728 NAGKQ9UJ70 344 aa15.21■□□□□ 0.03
PRKCB-202ENST00000321728 IGKV1-5P01602 117 aa15.2■□□□□ 0.02
PRKCB-202ENST00000321728 SRP14P37108 136 aaKnown RBP15.2■□□□□ 0.02
PRKCB-202ENST00000321728 FAM78BQ5VT40 261 aa15.2■□□□□ 0.02
PRKCB-202ENST00000321728 ACSM6Q6P461 480 aa15.2■□□□□ 0.02
PRKCB-202ENST00000321728 ZNF705AQ6ZN79 300 aaPredicted RBP15.2■□□□□ 0.02
PRKCB-202ENST00000321728 LSM10Q969L4 123 aaKnown RBP15.2■□□□□ 0.02
PRKCB-202ENST00000321728 IL17BQ9UHF5 180 aa15.2■□□□□ 0.02
PRKCB-202ENST00000321728 RBM7Q9Y580 266 aaKnown RBP15.2■□□□□ 0.02
PRKCB-202ENST00000321728 MBP02144 154 aa15.2■□□□□ 0.02
PRKCB-202ENST00000321728 PCBD1P61457 104 aa15.2■□□□□ 0.02
PRKCB-202ENST00000321728 RAC1P63000 192 aa15.2■□□□□ 0.02
PRKCB-202ENST00000321728 TRIM61Q5EBN2 209 aa15.2■□□□□ 0.02
PRKCB-202ENST00000321728 BTNL3Q6UXE8 466 aa15.2■□□□□ 0.02
PRKCB-202ENST00000321728 MYPOPQ86VE0 399 aaPredicted RBP15.2■□□□□ 0.02
PRKCB-202ENST00000321728 ZDHHC23Q8IYP9 409 aa15.2■□□□□ 0.02
PRKCB-202ENST00000321728 A0A1B0GUS0 222 aa15.2■□□□□ 0.02
PRKCB-202ENST00000321728 GALR2O43603 387 aaPredicted RBP15.2■□□□□ 0.02
PRKCB-202ENST00000321728 CLDN1O95832 211 aa15.2■□□□□ 0.02
PRKCB-202ENST00000321728 RAB4AP20338 218 aa15.2■□□□□ 0.02
PRKCB-202ENST00000321728 WNT5AP41221 380 aa15.2■□□□□ 0.02
PRKCB-202ENST00000321728 MKXQ8IYA7 352 aa15.2■□□□□ 0.02
PRKCB-202ENST00000321728 PRR18Q8N4B5 295 aa15.2■□□□□ 0.02
PRKCB-202ENST00000321728 PSMF1Q92530 271 aa15.2■□□□□ 0.02
PRKCB-202ENST00000321728 SF3B5Q9BWJ5 86 aaKnown RBP15.2■□□□□ 0.02
PRKCB-202ENST00000321728 CRIM1Q9NZV1 1036 aa15.2■□□□□ 0.02
PRKCB-202ENST00000321728 RARRES3Q9UL19 164 aa15.2■□□□□ 0.02
PRKCB-202ENST00000321728 TRAPPC1Q9Y5R8 145 aa15.2■□□□□ 0.02
PRKCB-202ENST00000321728 FAM186AA6NE01 2351 aa15.19■□□□□ 0.02
PRKCB-202ENST00000321728 PDGFBP01127 241 aaPredicted RBP15.19■□□□□ 0.02
PRKCB-202ENST00000321728 TYMSP04818 313 aa15.19■□□□□ 0.02
PRKCB-202ENST00000321728 CST9LP1Q5W188 147 aa15.19■□□□□ 0.02
PRKCB-202ENST00000321728 TMEM256Q8N2U0 113 aa15.19■□□□□ 0.02
PRKCB-202ENST00000321728 OR10G9Q8NGN4 311 aa15.19■□□□□ 0.02
PRKCB-202ENST00000321728 OR10G7Q8NGN6 311 aa15.19■□□□□ 0.02
PRKCB-202ENST00000321728 MS4A10Q96PG2 267 aa15.19■□□□□ 0.02
PRKCB-202ENST00000321728 FGF23Q9GZV9 251 aaPredicted RBP15.19■□□□□ 0.02
PRKCB-202ENST00000321728 OR1A1Q9P1Q5 309 aa15.19■□□□□ 0.02
PRKCB-202ENST00000321728 KCNS2Q9ULS6 477 aa15.19■□□□□ 0.02
PRKCB-202ENST00000321728 A0A0U1RQK1 487 aa15.19■□□□□ 0.02
PRKCB-202ENST00000321728 CTXND1A0A1B0GTU2 59 aa15.19■□□□□ 0.02
PRKCB-202ENST00000321728 ZNF320A2RRD8 509 aa15.19■□□□□ 0.02
PRKCB-202ENST00000321728 PAGE4O60829 102 aa15.19■□□□□ 0.02
PRKCB-202ENST00000321728 OR10J1P30954 320 aa15.19■□□□□ 0.02
PRKCB-202ENST00000321728 LRP11Q86VZ4 500 aa15.19■□□□□ 0.02
PRKCB-202ENST00000321728 AURKAIP1Q9NWT8 199 aaPredicted RBP15.19■□□□□ 0.02
PRKCB-202ENST00000321728 DOCK11Q5JSL3 2073 aa15.19■□□□□ 0.02
PRKCB-202ENST00000321728 ADAMTS20P59510 1910 aa15.18■□□□□ 0.02
PRKCB-202ENST00000321728 COL6A3P12111 3177 aa15.18■□□□□ 0.02
PRKCB-202ENST00000321728 TMEM210A6NLX4 147 aa15.18■□□□□ 0.02
PRKCB-202ENST00000321728 IGHV3-9P01782 118 aa15.18■□□□□ 0.02
PRKCB-202ENST00000321728 IL3RAP26951 378 aa15.18■□□□□ 0.02
PRKCB-202ENST00000321728 CARD18P57730 90 aa15.18■□□□□ 0.02
PRKCB-202ENST00000321728 RAC3P60763 192 aa15.18■□□□□ 0.02
PRKCB-202ENST00000321728 PMP22Q01453 160 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms