RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 GAR1Q9NY12 217 aaKnown RBP7.36□□□□□ -1.23
CLK1-201ENST00000321356 PSENENQ9NZ42 101 aa7.36□□□□□ -1.23
CLK1-201ENST00000321356 TRBV24-1A0A075B6N3 115 aa7.36□□□□□ -1.23
CLK1-201ENST00000321356 ELOA3CA0A087WX78 387 aaPredicted RBP7.36□□□□□ -1.23
CLK1-201ENST00000321356 ZFP92A6NM28 416 aa7.36□□□□□ -1.23
CLK1-201ENST00000321356 FAM166BA8MTA8 275 aa7.36□□□□□ -1.23
CLK1-201ENST00000321356 CLDN34H7C241 214 aa7.36□□□□□ -1.23
CLK1-201ENST00000321356 TGOLN2O43493 480 aa7.36□□□□□ -1.23
CLK1-201ENST00000321356 SPINK2P20155 84 aa7.36□□□□□ -1.23
CLK1-201ENST00000321356 CLN3Q13286 438 aa7.36□□□□□ -1.23
CLK1-201ENST00000321356 TMEM41BQ5BJD5 291 aa7.36□□□□□ -1.23
CLK1-201ENST00000321356 LCN15Q6UWW0 184 aa7.36□□□□□ -1.23
CLK1-201ENST00000321356 CENPVQ7Z7K6 275 aaPredicted RBP7.36□□□□□ -1.23
CLK1-201ENST00000321356 MRGPRGQ86SM5 289 aa7.36□□□□□ -1.23
CLK1-201ENST00000321356 WDR86Q86TI4 376 aa7.36□□□□□ -1.23
CLK1-201ENST00000321356 Q8IYB0 196 aa7.36□□□□□ -1.23
CLK1-201ENST00000321356 HIST3H2BBQ8N257 126 aa7.36□□□□□ -1.23
CLK1-201ENST00000321356 OR1K1Q8NGR3 316 aa7.36□□□□□ -1.23
CLK1-201ENST00000321356 BCL2L2Q92843 193 aaPredicted RBP7.36□□□□□ -1.23
CLK1-201ENST00000321356 PINX1Q96BK5 328 aaKnown RBP7.36□□□□□ -1.23
CLK1-201ENST00000321356 VAX2Q9UIW0 290 aa7.36□□□□□ -1.23
CLK1-201ENST00000321356 PPP1R3CQ9UQK1 317 aa7.36□□□□□ -1.23
CLK1-201ENST00000321356 WIPI2Q9Y4P8 454 aa7.36□□□□□ -1.23
CLK1-201ENST00000321356 DOCK7Q96N67 2140 aa7.36□□□□□ -1.23
CLK1-201ENST00000321356 AHCTF1Q8WYP5 2266 aa7.36□□□□□ -1.23
CLK1-201ENST00000321356 FAM186AA6NE01 2351 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 CHD3Q12873 2000 aaKnown RBP7.35□□□□□ -1.23
CLK1-201ENST00000321356 TRAV39A0A0B4J263 110 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 C9orf172C9J069 976 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 J3QW42 95 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 OR2H2O95918 312 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 MT-CO3P00414 261 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 PDGFBP01127 241 aaPredicted RBP7.35□□□□□ -1.23
CLK1-201ENST00000321356 TRGC2P03986 189 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 P0C879 139 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 S100A2P29034 98 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 ZNF146Q15072 292 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 OR1C1Q15619 314 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 DNLZQ5SXM8 178 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 TMEM14EPQ6UXP3 125 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 C1orf87Q8N0U7 546 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 DRAM1Q8N682 238 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 TMEM105Q8N8V8 129 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 ABHD5Q8WTS1 349 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 TAF15Q92804 592 aaKnown RBP eCLIP7.35□□□□□ -1.23
CLK1-201ENST00000321356 FAM210BQ96KR6 192 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 OR4C12Q96R67 309 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 AGMATQ9BSE5 352 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 RTL8AQ9BWD3 113 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 BCL2L14Q9BZR8 327 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 CTDSP1Q9GZU7 261 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 PRSS50Q9UI38 385 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 TIMM9Q9Y5J7 89 aa7.35□□□□□ -1.23
CLK1-201ENST00000321356 MAP1LC3B2A6NCE7 125 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 ZNF729A6NN14 1252 aaPredicted RBP7.34□□□□□ -1.23
CLK1-201ENST00000321356 SIRPB1O00241 398 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 LAMTOR5O43504 91 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 OPN1MWP04001 364 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 SOD3P08294 240 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 PGA5P0DJD9 388 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 OPN1MW2P0DN77 364 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 OPN1MW3P0DN78 364 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 FGF8P55075 233 aaPredicted RBP7.34□□□□□ -1.23
CLK1-201ENST00000321356 SLC38A11Q08AI6 406 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 IGFBP7Q16270 282 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 OR2B11Q5JQS5 317 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 WDR25Q64LD2 544 aaPredicted RBP7.34□□□□□ -1.23
CLK1-201ENST00000321356 DBX2Q6ZNG2 339 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 MDP1Q86V88 176 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 LILRB2Q8N423 598 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 SCCPDHQ8NBX0 429 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 FRZBQ92765 325 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 MAP1LC3BQ9GZQ8 125 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 TRAPPC2LQ9UL33 140 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 FRYQ5TBA9 3013 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 RNF212BA8MTL3 300 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 C1QTNF9BB2RNN3 333 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 PPP1R2P9O14990 202 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 GATCO43716 136 aaKnown RBP7.34□□□□□ -1.23
CLK1-201ENST00000321356 WDR1O75083 606 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 NDUFS6O75380 124 aaKnown RBP7.34□□□□□ -1.23
CLK1-201ENST00000321356 IFNA1P01562 189 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 NKX6-1P78426 367 aaPredicted RBP7.34□□□□□ -1.23
CLK1-201ENST00000321356 TNFRSF9Q07011 255 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 EIF4EBP1Q13541 118 aaPredicted RBP7.34□□□□□ -1.23
CLK1-201ENST00000321356 C3AR1Q16581 482 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 DCAF10Q5QP82 559 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 SPATA46Q5T0L3 261 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 MCEMP1Q8IX19 187 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 FGFRL1Q8N441 504 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 RPP25LQ8N5L8 163 aaKnown RBP7.34□□□□□ -1.23
CLK1-201ENST00000321356 NANOS1Q8WY41 292 aaKnown RBP7.34□□□□□ -1.23
CLK1-201ENST00000321356 GPR87Q9BY21 358 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 OR51B6Q9H340 312 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 RBKSQ9H477 322 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 CDH20Q9HBT6 801 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 ABI3Q9P2A4 366 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 HSPB7Q9UBY9 170 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 KCNS2Q9ULS6 477 aa7.34□□□□□ -1.23
CLK1-201ENST00000321356 POLDIP2Q9Y2S7 368 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms