RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 LOC102724200A0A096LPH7 203 aaPredicted RBP6.78□□□□□ -1.32
RTL3-201ENST00000321110 IGKV1-12A0A0C4DH73 117 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 A0A1W2PQD3 144 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 PIAS2O75928 621 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 NAPSAO96009 420 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 IGKV1D-12P01611 117 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 SERPINA7P05543 415 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 FRMD6-AS1P0C7T7 363 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 VAMP3Q15836 100 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 TAF15Q92804 592 aaKnown RBP eCLIP6.78□□□□□ -1.32
RTL3-201ENST00000321110 RAB40CQ96S21 281 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 WNT10AQ9GZT5 417 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 NRN1Q9NPD7 142 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 MRPS16Q9Y3D3 137 aaKnown RBP6.78□□□□□ -1.32
RTL3-201ENST00000321110 TBL2Q9Y4P3 447 aaKnown RBP6.78□□□□□ -1.32
RTL3-201ENST00000321110 RBM7Q9Y580 266 aaKnown RBP6.78□□□□□ -1.32
RTL3-201ENST00000321110 ATG2BQ96BY7 2078 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 UBE2L5PA0A1B0GUS4 154 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 C2orf72A6NCS6 295 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 VSTM2BA6NLU5 285 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 SHISA8B8ZZ34 492 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 F5H5K5 113 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 CRYAAP02489 173 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 PSG1P11464 419 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 CD46P15529 392 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 PRSS12P56730 875 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 CLRN1P58418 232 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 GNB1P62873 340 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 RHOGP84095 191 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 Q0VG73 95 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 ASCL4Q6XD76 172 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 ATOH7Q8N100 152 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 ZIC4Q8N9L1 334 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 THAP3Q8WTV1 239 aaPredicted RBP6.78□□□□□ -1.32
RTL3-201ENST00000321110 MMABQ96EY8 250 aaPredicted RBP6.78□□□□□ -1.32
RTL3-201ENST00000321110 OR6C1Q96RD1 312 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 LRFN3Q9BTN0 628 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 CCL28Q9NRJ3 127 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 CLN8Q9UBY8 286 aa6.78□□□□□ -1.32
RTL3-201ENST00000321110 SPAG17Q6Q759 2223 aa6.77□□□□□ -1.32
RTL3-201ENST00000321110 IGHV2-26A0A0B4J1V2 119 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 IGHV1-69-2A0A0G2JMI3 117 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 CTXND1A0A1B0GTU2 59 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 IGLC7A0M8Q6 106 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 SLC22A20A6NK97 555 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 H3BML4 177 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 TMPRSS2O15393 492 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 WDR1O75083 606 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 NRASP01111 189 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 KRASP01116 189 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 IGKV3-11P04433 115 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 DEFA4P12838 97 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 APOBEC3AP31941 199 aaPredicted RBP6.77□□□□□ -1.33
RTL3-201ENST00000321110 RPS20P60866 119 aaKnown RBP6.77□□□□□ -1.33
RTL3-201ENST00000321110 GRB2P62993 217 aaKnown RBP6.77□□□□□ -1.33
RTL3-201ENST00000321110 PLCXD2Q0VAA5 305 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 PLPPR5Q32ZL2 321 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 SLC25A47Q6Q0C1 308 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 OR5D13Q8NGL4 314 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 OR1K1Q8NGR3 316 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 OR5P3Q8WZ94 311 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 KLHDC7BQ96G42 594 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 SFRP2Q96HF1 295 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 GNB4Q9HAV0 340 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 SLC35D1Q9NTN3 355 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 PSENENQ9NZ42 101 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 ARHGAP21Q5T5U3 1957 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 TRBV20OR9-2A0A075B6H5 130 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 A0A1W2PRS3 328 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 OR5B21A6NL26 309 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 C11orf94C9JXX5 98 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 ZNF253O75346 499 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 HNRNPA1P09651 372 aaKnown RBP eCLIP6.77□□□□□ -1.33
RTL3-201ENST00000321110 NBEAP1P0C6P0 100 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 DAZAP2Q15038 168 aaPredicted RBP6.77□□□□□ -1.33
RTL3-201ENST00000321110 RSPO1Q2MKA7 263 aaPredicted RBP6.77□□□□□ -1.33
RTL3-201ENST00000321110 WDR5BQ86VZ2 330 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 OR4F17Q8NGA8 305 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 OR56B2PQ8NGI1 322 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 CRISPLD2Q9H0B8 497 aa6.77□□□□□ -1.33
RTL3-201ENST00000321110 RANBP2P49792 3224 aaKnown RBP6.76□□□□□ -1.33
RTL3-201ENST00000321110 LIPT2A6NK58 231 aa6.76□□□□□ -1.33
RTL3-201ENST00000321110 SYNGR2O43760 224 aa6.76□□□□□ -1.33
RTL3-201ENST00000321110 NDUFB4O95168 129 aa6.76□□□□□ -1.33
RTL3-201ENST00000321110 C3orf79P0CE67 100 aa6.76□□□□□ -1.33
RTL3-201ENST00000321110 CTSSP25774 331 aa6.76□□□□□ -1.33
RTL3-201ENST00000321110 AMTP48728 403 aa6.76□□□□□ -1.33
RTL3-201ENST00000321110 PMP22Q01453 160 aa6.76□□□□□ -1.33
RTL3-201ENST00000321110 MYBPHQ13203 477 aa6.76□□□□□ -1.33
RTL3-201ENST00000321110 KRTCAP3Q53RY4 240 aa6.76□□□□□ -1.33
RTL3-201ENST00000321110 ZDHHC23Q8IYP9 409 aa6.76□□□□□ -1.33
RTL3-201ENST00000321110 BCL2L2Q92843 193 aaPredicted RBP6.76□□□□□ -1.33
RTL3-201ENST00000321110 RCHY1Q96PM5 261 aa6.76□□□□□ -1.33
RTL3-201ENST00000321110 TMEM131Q92545 1883 aa6.76□□□□□ -1.33
RTL3-201ENST00000321110 ARHGEF17Q96PE2 2063 aaPredicted RBP6.76□□□□□ -1.33
RTL3-201ENST00000321110 BLACEA4D250 179 aa6.76□□□□□ -1.33
RTL3-201ENST00000321110 FAM166BA8MTA8 275 aa6.76□□□□□ -1.33
RTL3-201ENST00000321110 H0Y980 276 aa6.76□□□□□ -1.33
RTL3-201ENST00000321110 PDCD6O75340 191 aa6.76□□□□□ -1.33
RTL3-201ENST00000321110 PGLYRP1O75594 196 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms