RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 TMEM211Q6ICI0 200 aa13.51□□□□□ -0.25
USH1C-202ENST00000318024 OR2T2Q6IF00 324 aa13.51□□□□□ -0.25
USH1C-202ENST00000318024 DPPA3Q6W0C5 159 aa13.51□□□□□ -0.25
USH1C-202ENST00000318024 FAM185AQ8N0U4 392 aa13.51□□□□□ -0.25
USH1C-202ENST00000318024 SLC7A11Q9UPY5 501 aa13.51□□□□□ -0.25
USH1C-202ENST00000318024 A0A1W2PR80 420 aa13.51□□□□□ -0.25
USH1C-202ENST00000318024 PDCD6O75340 191 aa13.51□□□□□ -0.25
USH1C-202ENST00000318024 CRYABP02511 175 aaKnown RBP13.51□□□□□ -0.25
USH1C-202ENST00000318024 KIR2DL2P43627 348 aaPredicted RBP13.51□□□□□ -0.25
USH1C-202ENST00000318024 BAXQ07812 192 aa13.51□□□□□ -0.25
USH1C-202ENST00000318024 KRTAP27-1Q3LI81 207 aa13.51□□□□□ -0.25
USH1C-202ENST00000318024 FAM180AQ6UWF9 173 aa13.51□□□□□ -0.25
USH1C-202ENST00000318024 LHFPL2Q6ZUX7 228 aa13.51□□□□□ -0.25
USH1C-202ENST00000318024 OSR2Q8N2R0 312 aa13.51□□□□□ -0.25
USH1C-202ENST00000318024 A0A1B0GU03 582 aa13.5□□□□□ -0.25
USH1C-202ENST00000318024 AHRRA9YTQ3 701 aa13.5□□□□□ -0.25
USH1C-202ENST00000318024 SSSCA1O60232 199 aa13.5□□□□□ -0.25
USH1C-202ENST00000318024 DDTP30046 118 aa13.5□□□□□ -0.25
USH1C-202ENST00000318024 NKX6-1P78426 367 aaPredicted RBP13.5□□□□□ -0.25
USH1C-202ENST00000318024 CNN3Q15417 329 aaKnown RBP13.5□□□□□ -0.25
USH1C-202ENST00000318024 Q6ZS49 121 aa13.5□□□□□ -0.25
USH1C-202ENST00000318024 DMRTC2Q8IXT2 367 aaPredicted RBP13.5□□□□□ -0.25
USH1C-202ENST00000318024 Q8NA96 180 aa13.5□□□□□ -0.25
USH1C-202ENST00000318024 FAM210BQ96KR6 192 aa13.5□□□□□ -0.25
USH1C-202ENST00000318024 RNF115Q9Y4L5 304 aa13.5□□□□□ -0.25
USH1C-202ENST00000318024 GTF3C1Q12789 2109 aa13.5□□□□□ -0.25
USH1C-202ENST00000318024 LYZL6O75951 148 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 CST7O76096 145 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 HBE1P02100 147 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 CEBPGP53567 150 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 TAS2R30P59541 319 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 HERV-K104P61576 105 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 NRN1LQ496H8 165 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 PDZD11Q5EBL8 140 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 SEM1Q6ZVN7 128 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 TBC1D26Q86UD7 250 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 SPIN2AQ99865 258 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 SPIN2BQ9BPZ2 258 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 MAGT1Q9H0U3 335 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 CDH20Q9HBT6 801 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 GP6Q9HCN6 339 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 ST3GAL6Q9Y274 331 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 TRBV24-1A0A075B6N3 115 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 DUXBA0A1W2PPF3 345 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 ADAM20O43506 726 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 SFTPCP11686 197 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 RPL23AP62750 156 aaKnown RBP13.49□□□□□ -0.25
USH1C-202ENST00000318024 ZNF295-AS1Q8N0V1 137 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 OR5R1Q8NH85 324 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 HIST1H2BLQ99880 126 aa13.49□□□□□ -0.25
USH1C-202ENST00000318024 C5orf49A4QMS7 147 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 TGOLN2O43493 480 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 FABP4P15090 132 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 UCP1P25874 307 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 CD200P41217 278 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 NPBWR2P48146 333 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 TLE4Q04727 773 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 GUSBP1Q15486 140 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 AKR1C8PQ5T2L2 129 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 SSX9Q7RTT3 188 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 CMTM1Q8IZ96 169 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 OR1K1Q8NGR3 316 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 BORCS8Q96FH0 119 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 MEGF10Q96KG7 1140 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 IGHV1-2P23083 117 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 IL2RGP31785 369 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 CEACAM6P40199 344 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 RBM11P57052 281 aaKnown RBP13.48□□□□□ -0.25
USH1C-202ENST00000318024 PNRC1Q12796 327 aaPredicted RBP13.48□□□□□ -0.25
USH1C-202ENST00000318024 PDCD1Q15116 288 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 PRR30Q53SZ7 412 aaPredicted RBP13.48□□□□□ -0.25
USH1C-202ENST00000318024 ZNF695Q8IW36 515 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 Q8NFD4 153 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 ATP5SQ99766 215 aa13.48□□□□□ -0.25
USH1C-202ENST00000318024 CISD1Q9NZ45 108 aaKnown RBP13.48□□□□□ -0.25
USH1C-202ENST00000318024 RELNP78509 3460 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 SLC31A2O15432 143 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 CYB5R3P00387 301 aaPredicted RBP13.47□□□□□ -0.25
USH1C-202ENST00000318024 FUT3P21217 361 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 IL24Q13007 206 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 ZNF154Q13106 437 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 ZNF818PQ6ZRF7 136 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 BEND4Q6ZU67 534 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 DPPA2Q7Z7J5 298 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 C1orf87Q8N0U7 546 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 BCL2L2Q92843 193 aaPredicted RBP13.47□□□□□ -0.25
USH1C-202ENST00000318024 S100PBPQ96BU1 408 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 SDF2L1Q9HCN8 221 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 TLN1Q9Y490 2541 aaKnown RBP13.47□□□□□ -0.25
USH1C-202ENST00000318024 KIAA1324LA8MWY0 1029 aaPredicted RBP13.47□□□□□ -0.25
USH1C-202ENST00000318024 CLDN34H7C241 214 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 NRASP01111 189 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 PGA5P0DJD9 388 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 VDAC1P21796 283 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 TAS2R60P59551 318 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 MALLQ13021 153 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 OR8G1Q15617 311 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 SRSF7Q16629 238 aaKnown RBP eCLIP13.47□□□□□ -0.25
USH1C-202ENST00000318024 C5orf24Q7Z6I8 188 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 NAXEQ8NCW5 288 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms