RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 FIGNL2A6NMB9 653 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 ZNF850A8MQ14 1090 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 AHRRA9YTQ3 701 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 LILRA1O75019 489 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 COX5AP20674 150 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 PAX5Q02548 391 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 CNN3Q15417 329 aaKnown RBP11.12□□□□□ -0.63
CPNE1-201ENST00000317677 BTNL3Q6UXE8 466 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 OR1P1Q8NH06 330 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 MARCH1Q8TCQ1 289 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 C22orf15Q8WYQ4 148 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 ABHD17AQ96GS6 310 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 ANAPC10Q9UM13 185 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 CHTOPQ9Y3Y2 248 aaKnown RBP11.12□□□□□ -0.63
CPNE1-201ENST00000317677 FAM215AQ9Y5M1 114 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 GCN1Q92616 2671 aaKnown RBP11.11□□□□□ -0.63
CPNE1-201ENST00000317677 ZNF705GA8MUZ8 300 aaPredicted RBP11.11□□□□□ -0.63
CPNE1-201ENST00000317677 MSTNO14793 375 aa11.11□□□□□ -0.63
CPNE1-201ENST00000317677 HSPA12AO43301 675 aa11.11□□□□□ -0.63
CPNE1-201ENST00000317677 SCGNO76038 276 aa11.11□□□□□ -0.63
CPNE1-201ENST00000317677 CGAP01215 116 aa11.11□□□□□ -0.63
CPNE1-201ENST00000317677 SRP19P09132 144 aaKnown RBP11.11□□□□□ -0.63
CPNE1-201ENST00000317677 FAM87AP0C7U9 286 aa11.11□□□□□ -0.63
CPNE1-201ENST00000317677 PGA5P0DJD9 388 aa11.11□□□□□ -0.63
CPNE1-201ENST00000317677 TMEM225BP0DP42 221 aa11.11□□□□□ -0.63
CPNE1-201ENST00000317677 HRH1P35367 487 aa11.11□□□□□ -0.63
CPNE1-201ENST00000317677 P2RY1P47900 373 aa11.11□□□□□ -0.63
CPNE1-201ENST00000317677 PLP2Q04941 152 aa11.11□□□□□ -0.63
CPNE1-201ENST00000317677 PLCXD3Q63HM9 321 aa11.11□□□□□ -0.63
CPNE1-201ENST00000317677 LHFPL2Q6ZUX7 228 aa11.11□□□□□ -0.63
CPNE1-201ENST00000317677 CALHM1Q8IU99 346 aa11.11□□□□□ -0.63
CPNE1-201ENST00000317677 BORCS8Q96FH0 119 aa11.11□□□□□ -0.63
CPNE1-201ENST00000317677 Q96M66 194 aa11.11□□□□□ -0.63
CPNE1-201ENST00000317677 OR51B6Q9H340 312 aa11.11□□□□□ -0.63
CPNE1-201ENST00000317677 METTL8Q9H825 291 aaKnown RBP11.11□□□□□ -0.63
CPNE1-201ENST00000317677 PRR14LQ5THK1 2151 aa11.11□□□□□ -0.63
CPNE1-201ENST00000317677 MBD3L4A6NDZ8 208 aaPredicted RBP11.1□□□□□ -0.63
CPNE1-201ENST00000317677 MBD3L3A6NE82 208 aaPredicted RBP11.1□□□□□ -0.63
CPNE1-201ENST00000317677 MBD3L5A6NJ08 208 aaPredicted RBP11.1□□□□□ -0.63
CPNE1-201ENST00000317677 DEDDO75618 318 aa11.1□□□□□ -0.63
CPNE1-201ENST00000317677 GSTP1P09211 210 aaKnown RBP11.1□□□□□ -0.63
CPNE1-201ENST00000317677 SUPT4H1P63272 117 aaKnown RBP11.1□□□□□ -0.63
CPNE1-201ENST00000317677 DAZAP2Q15038 168 aaPredicted RBP11.1□□□□□ -0.63
CPNE1-201ENST00000317677 ANKRD55Q3KP44 614 aa11.1□□□□□ -0.63
CPNE1-201ENST00000317677 VAX1Q5SQQ9 334 aa11.1□□□□□ -0.63
CPNE1-201ENST00000317677 SP5Q6BEB4 398 aaPredicted RBP11.1□□□□□ -0.63
CPNE1-201ENST00000317677 ZNF429Q86V71 674 aa11.1□□□□□ -0.63
CPNE1-201ENST00000317677 FAM219AQ8IW50 185 aa11.1□□□□□ -0.63
CPNE1-201ENST00000317677 FOXRED2Q8IWF2 684 aa11.1□□□□□ -0.63
CPNE1-201ENST00000317677 WDR31Q8NA23 367 aa11.1□□□□□ -0.63
CPNE1-201ENST00000317677 OR51T1Q8NGJ9 327 aa11.1□□□□□ -0.63
CPNE1-201ENST00000317677 OR10G4Q8NGN3 311 aa11.1□□□□□ -0.63
CPNE1-201ENST00000317677 MBD3L2Q8NHZ7 208 aaPredicted RBP11.1□□□□□ -0.63
CPNE1-201ENST00000317677 STARD4Q96DR4 205 aa11.1□□□□□ -0.63
CPNE1-201ENST00000317677 ACY3Q96HD9 319 aa11.1□□□□□ -0.63
CPNE1-201ENST00000317677 URM1Q9BTM9 101 aaKnown RBP11.1□□□□□ -0.63
CPNE1-201ENST00000317677 GSX1Q9H4S2 264 aaPredicted RBP11.1□□□□□ -0.63
CPNE1-201ENST00000317677 C5orf66Q9H5L9 145 aa11.1□□□□□ -0.63
CPNE1-201ENST00000317677 TUBD1Q9UJT1 453 aa11.1□□□□□ -0.63
CPNE1-201ENST00000317677 A8MXE2 369 aa11.1□□□□□ -0.63
CPNE1-201ENST00000317677 PPP5D1E7EU14 171 aa11.1□□□□□ -0.63
CPNE1-201ENST00000317677 HSPB1P04792 205 aaKnown RBP11.1□□□□□ -0.63
CPNE1-201ENST00000317677 FUT6P51993 359 aa11.1□□□□□ -0.63
CPNE1-201ENST00000317677 ZNF324BQ6AW86 544 aaPredicted RBP11.1□□□□□ -0.63
CPNE1-201ENST00000317677 MRPL21Q7Z2W9 205 aaKnown RBP11.1□□□□□ -0.63
CPNE1-201ENST00000317677 NANOS1Q8WY41 292 aaKnown RBP11.1□□□□□ -0.63
CPNE1-201ENST00000317677 PECRQ9BY49 303 aa11.1□□□□□ -0.63
CPNE1-201ENST00000317677 HIPK2Q9H2X6 1198 aa11.1□□□□□ -0.63
CPNE1-201ENST00000317677 ELL3Q9HB65 397 aaPredicted RBP11.1□□□□□ -0.63
CPNE1-201ENST00000317677 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.1□□□□□ -0.63
CPNE1-201ENST00000317677 PLSCR4Q9NRQ2 329 aa11.1□□□□□ -0.63
CPNE1-201ENST00000317677 K7N7A8 449 aa11.09□□□□□ -0.63
CPNE1-201ENST00000317677 PRDX4Q13162 271 aa11.09□□□□□ -0.63
CPNE1-201ENST00000317677 IGFBP7Q16270 282 aa11.09□□□□□ -0.63
CPNE1-201ENST00000317677 GPR157Q5UAW9 335 aa11.09□□□□□ -0.63
CPNE1-201ENST00000317677 Q8NA96 180 aa11.09□□□□□ -0.63
CPNE1-201ENST00000317677 SNX22Q96L94 193 aa11.09□□□□□ -0.63
CPNE1-201ENST00000317677 NIPSNAP3BQ9BS92 247 aa11.09□□□□□ -0.63
CPNE1-201ENST00000317677 CBLN4Q9NTU7 201 aa11.09□□□□□ -0.63
CPNE1-201ENST00000317677 URGCP-MRPS24S4R325 110 aa11.09□□□□□ -0.63
CPNE1-201ENST00000317677 CD300LBA8K4G0 201 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 CLDN34H7C241 214 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 AGFG2O95081 481 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 CNOT4O95628 575 aaKnown RBP11.08□□□□□ -0.64
CPNE1-201ENST00000317677 FPR2P25090 351 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 BLVRBP30043 206 aaPredicted RBP11.08□□□□□ -0.64
CPNE1-201ENST00000317677 IDH3GP51553 393 aaPredicted RBP11.08□□□□□ -0.64
CPNE1-201ENST00000317677 S100A10P60903 97 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 MALLQ13021 153 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 TEX38Q6PEX7 206 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 OR4X1Q8NH49 305 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 BOD1Q96IK1 185 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 RARRES2Q99969 163 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 PARP12Q9H0J9 701 aaKnown RBP11.08□□□□□ -0.64
CPNE1-201ENST00000317677 SRD5A3Q9H8P0 318 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 LPAR2Q9HBW0 351 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 KIAA1456Q9P272 454 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 ZFP30Q9Y2G7 519 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 ESPL1Q14674 2120 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 A0A1W2PN81 502 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms