RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 PSENENQ9NZ42 101 aa11.43□□□□□ -0.58
SKA3-202ENST00000314759 MRPS17Q9Y2R5 130 aaKnown RBP11.43□□□□□ -0.58
SKA3-202ENST00000314759 A0A096LPE4 126 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 A0A1W2PPZ6 126 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 TRAPPC6AO75865 159 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 S100GP29377 79 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 IL11RAQ14626 422 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 RTP5Q14D33 572 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 LRRC75BQ2VPJ9 315 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 TEX38Q6PEX7 206 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 MRGPRGQ86SM5 289 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 MKXQ8IYA7 352 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 SAP25Q8TEE9 199 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 RDH5Q92781 318 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 SGCZQ96LD1 299 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 ZNF576Q9H609 170 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 ZNF552Q9H707 407 aaPredicted RBP11.42□□□□□ -0.58
SKA3-202ENST00000314759 C5orf49A4QMS7 147 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 IGLV2-14P01704 120 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 P04436 131 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 GNB2P62879 340 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 PCGF1Q9BSM1 259 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 PRRG4Q9BZD6 226 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 RNF150Q9ULK6 438 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 TRAV24A0A0B4J272 114 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 LRRC3CA6NJW4 275 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 IGKV1-5P01602 117 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 CCL4P13236 92 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 NUBP1P53384 320 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 SERF2P84101 59 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 PMS2P11Q13670 270 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 SPEM1Q8N4L4 309 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 IL1F10Q8WWZ1 152 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 CTDSP1Q9GZU7 261 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 RIMS4Q9H426 269 aaPredicted RBP11.42□□□□□ -0.58
SKA3-202ENST00000314759 PLK3Q9H4B4 646 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 OR1A1Q9P1Q5 309 aa11.42□□□□□ -0.58
SKA3-202ENST00000314759 DMDP11532 3685 aa11.41□□□□□ -0.58
SKA3-202ENST00000314759 GALR2O43603 387 aaPredicted RBP11.41□□□□□ -0.58
SKA3-202ENST00000314759 GCGP01275 180 aa11.41□□□□□ -0.58
SKA3-202ENST00000314759 ARF1P84077 181 aaKnown RBP11.41□□□□□ -0.58
SKA3-202ENST00000314759 PAX5Q02548 391 aa11.41□□□□□ -0.58
SKA3-202ENST00000314759 HNF4GQ14541 408 aa11.41□□□□□ -0.58
SKA3-202ENST00000314759 MRPL21Q7Z2W9 205 aaKnown RBP11.41□□□□□ -0.58
SKA3-202ENST00000314759 OR2Y1Q8NGV0 311 aa11.41□□□□□ -0.58
SKA3-202ENST00000314759 PSMF1Q92530 271 aa11.41□□□□□ -0.58
SKA3-202ENST00000314759 CELSR3Q9NYQ7 3312 aa11.41□□□□□ -0.58
SKA3-202ENST00000314759 MAP1LC3B2A6NCE7 125 aa11.41□□□□□ -0.58
SKA3-202ENST00000314759 NGFP01138 241 aa11.41□□□□□ -0.58
SKA3-202ENST00000314759 ELLP55199 621 aaPredicted RBP11.41□□□□□ -0.58
SKA3-202ENST00000314759 ACSF3Q4G176 576 aaPredicted RBP11.41□□□□□ -0.58
SKA3-202ENST00000314759 TMEM41BQ5BJD5 291 aa11.41□□□□□ -0.58
SKA3-202ENST00000314759 COA6Q5JTJ3 125 aaKnown RBP11.41□□□□□ -0.58
SKA3-202ENST00000314759 OR51G1Q8NGK1 321 aa11.41□□□□□ -0.58
SKA3-202ENST00000314759 LSM10Q969L4 123 aaKnown RBP11.41□□□□□ -0.58
SKA3-202ENST00000314759 OR4C12Q96R67 309 aa11.41□□□□□ -0.58
SKA3-202ENST00000314759 PYGO2Q9BRQ0 406 aa11.41□□□□□ -0.58
SKA3-202ENST00000314759 MAP1LC3BQ9GZQ8 125 aa11.41□□□□□ -0.58
SKA3-202ENST00000314759 TRBV6-6A0A0A6YYG2 114 aa11.4□□□□□ -0.58
SKA3-202ENST00000314759 ZNF503-AS2A6NEH8 195 aa11.4□□□□□ -0.58
SKA3-202ENST00000314759 CD300LBA8K4G0 201 aa11.4□□□□□ -0.58
SKA3-202ENST00000314759 ZNF737O75373 536 aa11.4□□□□□ -0.58
SKA3-202ENST00000314759 NCR3LG1Q68D85 454 aa11.4□□□□□ -0.58
SKA3-202ENST00000314759 OR10V1Q8NGI7 309 aa11.4□□□□□ -0.58
SKA3-202ENST00000314759 OR1K1Q8NGR3 316 aa11.4□□□□□ -0.58
SKA3-202ENST00000314759 SMIM7Q9BQ49 75 aa11.4□□□□□ -0.58
SKA3-202ENST00000314759 WDR61Q9GZS3 305 aaKnown RBP11.4□□□□□ -0.58
SKA3-202ENST00000314759 PRSS50Q9UI38 385 aa11.4□□□□□ -0.58
SKA3-202ENST00000314759 FUT9Q9Y231 359 aa11.4□□□□□ -0.58
SKA3-202ENST00000314759 ZNF25P17030 456 aaPredicted RBP11.4□□□□□ -0.58
SKA3-202ENST00000314759 IGFBP4P22692 258 aa11.4□□□□□ -0.58
SKA3-202ENST00000314759 HBG1P69891 147 aa11.4□□□□□ -0.58
SKA3-202ENST00000314759 HBG2P69892 147 aa11.4□□□□□ -0.58
SKA3-202ENST00000314759 RPP25LQ8N5L8 163 aaKnown RBP11.4□□□□□ -0.58
SKA3-202ENST00000314759 DEPPQ9NTK1 212 aa11.4□□□□□ -0.58
SKA3-202ENST00000314759 PLA2G3Q9NZ20 509 aa11.4□□□□□ -0.58
SKA3-202ENST00000314759 PPP1R3CQ9UQK1 317 aa11.4□□□□□ -0.58
SKA3-202ENST00000314759 TRAV39A0A0B4J263 110 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 A0A1W2PPQ1 181 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 PPP5D1E7EU14 171 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 HMGB3O15347 200 aaKnown RBP11.39□□□□□ -0.59
SKA3-202ENST00000314759 MRPL33O75394 65 aaKnown RBP11.39□□□□□ -0.59
SKA3-202ENST00000314759 IGKV1D-33P01593 117 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 IGKV1-33P01594 117 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 GALR1P47211 349 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 FOXG1P55316 489 aaPredicted RBP11.39□□□□□ -0.59
SKA3-202ENST00000314759 NRN1LQ496H8 165 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 ZNF585BQ52M93 769 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 SPANXN5Q5MJ07 72 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 MRPL41Q8IXM3 137 aaKnown RBP11.39□□□□□ -0.59
SKA3-202ENST00000314759 OR5A2Q8NGI9 324 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 RPUSD4Q96CM3 377 aaKnown RBP11.39□□□□□ -0.59
SKA3-202ENST00000314759 NAT8Q9UHE5 227 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 K7ESF4 209 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 LILRA1O75019 489 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 WNT2P09544 360 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 TESK1Q15569 626 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 TMEM241Q24JQ0 296 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 LHX4Q969G2 390 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 PINX1Q96BK5 328 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms