RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 MOGAT2Q3SYC2 334 aa11.53□□□□□ -0.56
PPP1CA-201ENST00000312989 PDLIM3Q53GG5 364 aaPredicted RBP11.53□□□□□ -0.56
PPP1CA-201ENST00000312989 HES5Q5TA89 166 aa11.53□□□□□ -0.56
PPP1CA-201ENST00000312989 ZNF833PQ6ZTB9 187 aa11.53□□□□□ -0.56
PPP1CA-201ENST00000312989 C1QL4Q86Z23 238 aa11.53□□□□□ -0.56
PPP1CA-201ENST00000312989 TGIF2LXQ8IUE1 241 aa11.53□□□□□ -0.56
PPP1CA-201ENST00000312989 ARHGAP5-AS1Q96IT6 56 aa11.53□□□□□ -0.56
PPP1CA-201ENST00000312989 NOL4LQ96MY1 436 aaPredicted RBP11.53□□□□□ -0.56
PPP1CA-201ENST00000312989 ABHD14AQ9BUJ0 271 aa11.53□□□□□ -0.56
PPP1CA-201ENST00000312989 PLGRKTQ9HBL7 147 aa11.53□□□□□ -0.56
PPP1CA-201ENST00000312989 RAB9BQ9NP90 201 aa11.53□□□□□ -0.56
PPP1CA-201ENST00000312989 IGKV1-6A0A0C4DH72 117 aa11.52□□□□□ -0.57
PPP1CA-201ENST00000312989 IFITM5A6NNB3 132 aa11.52□□□□□ -0.57
PPP1CA-201ENST00000312989 IL3RAP26951 378 aa11.52□□□□□ -0.57
PPP1CA-201ENST00000312989 HES1Q14469 280 aa11.52□□□□□ -0.57
PPP1CA-201ENST00000312989 RITA1Q96K30 269 aa11.52□□□□□ -0.57
PPP1CA-201ENST00000312989 NABP2Q9BQ15 211 aa11.52□□□□□ -0.57
PPP1CA-201ENST00000312989 AGMATQ9BSE5 352 aa11.52□□□□□ -0.57
PPP1CA-201ENST00000312989 PECRQ9BY49 303 aa11.52□□□□□ -0.57
PPP1CA-201ENST00000312989 ABCG5Q9H222 651 aa11.52□□□□□ -0.57
PPP1CA-201ENST00000312989 STEAP1Q9UHE8 339 aa11.52□□□□□ -0.57
PPP1CA-201ENST00000312989 SAA2-SAA4A0A096LPE2 208 aa11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 A0A0B4J203 849 aa11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 RAB27BO00194 218 aa11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 TXNL1O43396 289 aa11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 PROP1O75360 226 aa11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 SAA2P0DJI9 122 aaPredicted RBP11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 OR3A3P47888 321 aa11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 VEGFCP49767 419 aa11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 F2RL1P55085 397 aa11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 ARSJQ5FYB0 599 aaPredicted RBP11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 WFDC9Q8NEX5 89 aa11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 OR2T10Q8NGZ9 312 aa11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 GALMQ96C23 342 aa11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 HSPB9Q9BQS6 159 aa11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 URM1Q9BTM9 101 aaKnown RBP11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 MRPL20Q9BYC9 149 aaKnown RBP11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 Q9N2K0 584 aa11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 LIN7CQ9NUP9 197 aaKnown RBP11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 PLEKHJ1Q9NW61 149 aa11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 KCNIP1Q9NZI2 227 aa11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 OR1A1Q9P1Q5 309 aa11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 LINC00527Q9UJ94 153 aa11.51□□□□□ -0.57
PPP1CA-201ENST00000312989 PEX14O75381 377 aa11.5□□□□□ -0.57
PPP1CA-201ENST00000312989 MOSP00540 346 aa11.5□□□□□ -0.57
PPP1CA-201ENST00000312989 FGF9P31371 208 aaPredicted RBP11.5□□□□□ -0.57
PPP1CA-201ENST00000312989 GPR12P47775 334 aa11.5□□□□□ -0.57
PPP1CA-201ENST00000312989 HLA-DRB3P79483 266 aa11.5□□□□□ -0.57
PPP1CA-201ENST00000312989 CFHR3Q02985 330 aa11.5□□□□□ -0.57
PPP1CA-201ENST00000312989 C9orf152Q5JTZ5 239 aa11.5□□□□□ -0.57
PPP1CA-201ENST00000312989 C22orf42Q6IC83 251 aa11.5□□□□□ -0.57
PPP1CA-201ENST00000312989 ETV3LQ6ZN32 361 aa11.5□□□□□ -0.57
PPP1CA-201ENST00000312989 MOB1BQ7L9L4 216 aa11.5□□□□□ -0.57
PPP1CA-201ENST00000312989 CENPVQ7Z7K6 275 aaPredicted RBP11.5□□□□□ -0.57
PPP1CA-201ENST00000312989 ZNF329Q86UD4 541 aa11.5□□□□□ -0.57
PPP1CA-201ENST00000312989 R3HDM4Q96D70 268 aa11.5□□□□□ -0.57
PPP1CA-201ENST00000312989 S1PR3Q99500 378 aa11.5□□□□□ -0.57
PPP1CA-201ENST00000312989 YTHDF1Q9BYJ9 559 aaKnown RBP11.5□□□□□ -0.57
PPP1CA-201ENST00000312989 C12orf4Q9NQ89 552 aa11.5□□□□□ -0.57
PPP1CA-201ENST00000312989 TXNL4BQ9NX01 149 aaKnown RBP11.5□□□□□ -0.57
PPP1CA-201ENST00000312989 LRRC42Q9Y546 428 aa11.5□□□□□ -0.57
PPP1CA-201ENST00000312989 MFNGO00587 321 aa11.49□□□□□ -0.57
PPP1CA-201ENST00000312989 ITGB1BP1O14713 200 aa11.49□□□□□ -0.57
PPP1CA-201ENST00000312989 ST8SIA5O15466 376 aa11.49□□□□□ -0.57
PPP1CA-201ENST00000312989 SCTP09683 121 aa11.49□□□□□ -0.57
PPP1CA-201ENST00000312989 ZNF773Q6PK81 442 aa11.49□□□□□ -0.57
PPP1CA-201ENST00000312989 STPG2Q8N412 459 aa11.49□□□□□ -0.57
PPP1CA-201ENST00000312989 RIMS4Q9H426 269 aaPredicted RBP11.49□□□□□ -0.57
PPP1CA-201ENST00000312989 TSSC4Q9Y5U2 329 aaPredicted RBP11.49□□□□□ -0.57
PPP1CA-201ENST00000312989 A0A1W2PRX2 142 aa11.48□□□□□ -0.57
PPP1CA-201ENST00000312989 SMIM30A4D0T7 59 aa11.48□□□□□ -0.57
PPP1CA-201ENST00000312989 PSMB11A5LHX3 300 aa11.48□□□□□ -0.57
PPP1CA-201ENST00000312989 SLC2A2P11168 524 aaPredicted RBP11.48□□□□□ -0.57
PPP1CA-201ENST00000312989 CNTFRP26992 372 aa11.48□□□□□ -0.57
PPP1CA-201ENST00000312989 PSMD7P51665 324 aa11.48□□□□□ -0.57
PPP1CA-201ENST00000312989 OXLD1Q5BKU9 147 aa11.48□□□□□ -0.57
PPP1CA-201ENST00000312989 FAM71F2Q6NXP2 309 aa11.48□□□□□ -0.57
PPP1CA-201ENST00000312989 C18orf65Q6ZTR6 163 aa11.48□□□□□ -0.57
PPP1CA-201ENST00000312989 SLC35E3Q7Z769 313 aa11.48□□□□□ -0.57
PPP1CA-201ENST00000312989 OR4F17Q8NGA8 305 aa11.48□□□□□ -0.57
PPP1CA-201ENST00000312989 OR8H1Q8NGG4 311 aa11.48□□□□□ -0.57
PPP1CA-201ENST00000312989 OR56B1Q8NGI3 324 aa11.48□□□□□ -0.57
PPP1CA-201ENST00000312989 IL1F10Q8WWZ1 152 aa11.48□□□□□ -0.57
PPP1CA-201ENST00000312989 OR4F4Q96R69 305 aa11.48□□□□□ -0.57
PPP1CA-201ENST00000312989 TOLLIPQ9H0E2 274 aa11.48□□□□□ -0.57
PPP1CA-201ENST00000312989 SLC23A1Q9UHI7 598 aa11.48□□□□□ -0.57
PPP1CA-201ENST00000312989 RAB22AQ9UL26 194 aa11.48□□□□□ -0.57
PPP1CA-201ENST00000312989 TGP01266 2768 aa11.48□□□□□ -0.57
PPP1CA-201ENST00000312989 TCRBV4S1A1TA0A5B7 111 aa11.47□□□□□ -0.57
PPP1CA-201ENST00000312989 PDCD5O14737 125 aa11.47□□□□□ -0.57
PPP1CA-201ENST00000312989 CT45A6P0DMU7 189 aa11.47□□□□□ -0.57
PPP1CA-201ENST00000312989 CT45A5P0DMU8 189 aa11.47□□□□□ -0.57
PPP1CA-201ENST00000312989 CT45A7P0DMV0 189 aa11.47□□□□□ -0.57
PPP1CA-201ENST00000312989 SNRPBP14678 240 aaKnown RBP11.47□□□□□ -0.57
PPP1CA-201ENST00000312989 RAB3BP20337 219 aa11.47□□□□□ -0.57
PPP1CA-201ENST00000312989 PSMB9P28065 219 aa11.47□□□□□ -0.57
PPP1CA-201ENST00000312989 RPL39P5Q59GN2 51 aa11.47□□□□□ -0.57
PPP1CA-201ENST00000312989 OR2AK2Q8NG84 335 aa11.47□□□□□ -0.57
PPP1CA-201ENST00000312989 OR4X2Q8NGF9 303 aa11.47□□□□□ -0.57
PPP1CA-201ENST00000312989 FCGR1BQ92637 280 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms