RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 KCNIP1Q9NZI2 227 aa9.61□□□□□ -0.87
SCFD1-201ENST00000311943 CA11O75493 328 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 TSPAN9O75954 239 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 LPLP06858 475 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 RAB6AP20340 208 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 CNTFRP26992 372 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 ALDH3B2P48448 385 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 HLA-DRB3P79483 266 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 HES1Q14469 280 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 ZNF260Q3ZCT1 412 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 OR52M1Q8NGK5 317 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 OCSTAMPQ9BR26 566 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 SLC25A33Q9BSK2 321 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 ST6GALNAC5Q9BVH7 336 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 MRPL20Q9BYC9 149 aaKnown RBP9.6□□□□□ -0.87
SCFD1-201ENST00000311943 TRAV18A0A075B6X5 111 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 SAA2-SAA4A0A096LPE2 208 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 BET1O15155 118 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 NDUFA7O95182 113 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 SAA2P0DJI9 122 aaPredicted RBP9.6□□□□□ -0.87
SCFD1-201ENST00000311943 VSIG10L2P0DP72 767 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 CEACAM6P40199 344 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 ARFRP1Q13795 201 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 OR10A7Q8NGE5 316 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 OR4F5Q8NH21 305 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 C5orf30Q96GV9 206 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 ZNF251Q9BRH9 671 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 AGMATQ9BSE5 352 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 ABHD14AQ9BUJ0 271 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 ZNF747Q9BV97 191 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 VCX3AQ9NNX9 186 aa9.6□□□□□ -0.87
SCFD1-201ENST00000311943 FAM90A9PA6NNJ1 464 aa9.59□□□□□ -0.87
SCFD1-201ENST00000311943 EIF4EP06730 217 aaKnown RBP9.59□□□□□ -0.87
SCFD1-201ENST00000311943 DYNLT3P51808 116 aa9.59□□□□□ -0.87
SCFD1-201ENST00000311943 F2RL1P55085 397 aa9.59□□□□□ -0.87
SCFD1-201ENST00000311943 SPCS2Q15005 226 aa9.59□□□□□ -0.87
SCFD1-201ENST00000311943 AANATQ16613 207 aa9.59□□□□□ -0.87
SCFD1-201ENST00000311943 C11orf54Q9H0W9 315 aaPredicted RBP9.59□□□□□ -0.87
SCFD1-201ENST00000311943 BEX1Q9HBH7 125 aa9.59□□□□□ -0.87
SCFD1-201ENST00000311943 SPATA2Q9UM82 520 aa9.59□□□□□ -0.87
SCFD1-201ENST00000311943 NBEAL1Q6ZS30 2694 aa9.59□□□□□ -0.87
SCFD1-201ENST00000311943 CEACAM3P40198 252 aa9.58□□□□□ -0.88
SCFD1-201ENST00000311943 HTD2P86397 168 aa9.58□□□□□ -0.88
SCFD1-201ENST00000311943 LINC00311Q8N616 119 aa9.58□□□□□ -0.88
SCFD1-201ENST00000311943 EAF1Q96JC9 268 aaPredicted RBP9.58□□□□□ -0.88
SCFD1-201ENST00000311943 GPHA2Q96T91 129 aa9.58□□□□□ -0.88
SCFD1-201ENST00000311943 MRPS26Q9BYN8 205 aaKnown RBP9.58□□□□□ -0.88
SCFD1-201ENST00000311943 COMMD3Q9UBI1 195 aa9.58□□□□□ -0.88
SCFD1-201ENST00000311943 JPT1Q9UK76 154 aa9.58□□□□□ -0.88
SCFD1-201ENST00000311943 TRBV6-6A0A0A6YYG2 114 aa9.58□□□□□ -0.88
SCFD1-201ENST00000311943 TRDCB7Z8K6 153 aa9.58□□□□□ -0.88
SCFD1-201ENST00000311943 YPEL1O60688 119 aa9.58□□□□□ -0.88
SCFD1-201ENST00000311943 GABARAPO95166 117 aa9.58□□□□□ -0.88
SCFD1-201ENST00000311943 C9orf152Q5JTZ5 239 aa9.58□□□□□ -0.88
SCFD1-201ENST00000311943 KLHDC1Q8N7A1 406 aa9.58□□□□□ -0.88
SCFD1-201ENST00000311943 SAMD12Q8N8I0 201 aa9.58□□□□□ -0.88
SCFD1-201ENST00000311943 SLC25A46Q96AG3 418 aa9.58□□□□□ -0.88
SCFD1-201ENST00000311943 NOL4LQ96MY1 436 aaPredicted RBP9.58□□□□□ -0.88
SCFD1-201ENST00000311943 RBM14Q96PK6 669 aaKnown RBP9.58□□□□□ -0.88
SCFD1-201ENST00000311943 YPEL2Q96QA6 119 aa9.58□□□□□ -0.88
SCFD1-201ENST00000311943 C16orf95Q9H693 158 aa9.58□□□□□ -0.88
SCFD1-201ENST00000311943 RDH8Q9NYR8 311 aa9.58□□□□□ -0.88
SCFD1-201ENST00000311943 CMYA5Q8N3K9 4069 aa9.57□□□□□ -0.88
SCFD1-201ENST00000311943 METTL21EPA6NDL7 271 aa9.57□□□□□ -0.88
SCFD1-201ENST00000311943 FABP7O15540 132 aa9.57□□□□□ -0.88
SCFD1-201ENST00000311943 PEX14O75381 377 aa9.57□□□□□ -0.88
SCFD1-201ENST00000311943 GAPDHP04406 335 aaKnown RBP9.57□□□□□ -0.88
SCFD1-201ENST00000311943 TMEM11P17152 192 aa9.57□□□□□ -0.88
SCFD1-201ENST00000311943 MNDAP41218 407 aa9.57□□□□□ -0.88
SCFD1-201ENST00000311943 KIR2DS4P43632 304 aa9.57□□□□□ -0.88
SCFD1-201ENST00000311943 ZNF816Q0VGE8 651 aaPredicted RBP9.57□□□□□ -0.88
SCFD1-201ENST00000311943 HACD4Q5VWC8 232 aa9.57□□□□□ -0.88
SCFD1-201ENST00000311943 ANKRD13BQ86YJ7 626 aa9.57□□□□□ -0.88
SCFD1-201ENST00000311943 TGIF2LXQ8IUE1 241 aa9.57□□□□□ -0.88
SCFD1-201ENST00000311943 CLVS1Q8IUQ0 354 aaPredicted RBP9.57□□□□□ -0.88
SCFD1-201ENST00000311943 PTX4Q96A99 478 aa9.57□□□□□ -0.88
SCFD1-201ENST00000311943 PLSCR3Q9NRY6 295 aa9.57□□□□□ -0.88
SCFD1-201ENST00000311943 ABRACLQ9P1F3 81 aa9.57□□□□□ -0.88
SCFD1-201ENST00000311943 WNK1Q9H4A3 2382 aa9.57□□□□□ -0.88
SCFD1-201ENST00000311943 HSPA12AO43301 675 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 HPGDSO60760 199 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 OR8U9P0C7N5 309 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 NFYAP23511 347 aaPredicted RBP9.56□□□□□ -0.88
SCFD1-201ENST00000311943 BRS3P32247 399 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 TIMM50Q3ZCQ8 353 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 OR2AK2Q8NG84 335 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 OR8U1Q8NH10 309 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 CITED1Q99966 193 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 NABP2Q9BQ15 211 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 NPFFR1Q9GZQ6 430 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 AMMECR1Q9Y4X0 333 aaPredicted RBP9.56□□□□□ -0.88
SCFD1-201ENST00000311943 MMP24Q9Y5R2 645 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 CT45A6P0DMU7 189 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 CT45A5P0DMU8 189 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 CT45A7P0DMV0 189 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 CD28P10747 220 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 ZBTB25P24278 435 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 ZNF137PP52743 207 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 LSAMPQ13449 338 aa9.56□□□□□ -0.88
SCFD1-201ENST00000311943 RNASE12Q5GAN4 147 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms