RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 CT45A1Q5HYN5 189 aa18.07■□□□□ 0.48
HOXD4-201ENST00000306324 SLC25A48Q6ZT89 311 aaKnown RBP18.07■□□□□ 0.48
HOXD4-201ENST00000306324 LDLRAD3Q86YD5 345 aa18.07■□□□□ 0.48
HOXD4-201ENST00000306324 LINC00311Q8N616 119 aa18.07■□□□□ 0.48
HOXD4-201ENST00000306324 OR2AK2Q8NG84 335 aa18.07■□□□□ 0.48
HOXD4-201ENST00000306324 CT45A3Q8NHU0 189 aa18.07■□□□□ 0.48
HOXD4-201ENST00000306324 ABHD14AQ9BUJ0 271 aa18.07■□□□□ 0.48
HOXD4-201ENST00000306324 MMP27Q9H306 513 aa18.07■□□□□ 0.48
HOXD4-201ENST00000306324 IFT46Q9NQC8 304 aa18.07■□□□□ 0.48
HOXD4-201ENST00000306324 DNAJC9-AS1A6NH13 148 aa18.07■□□□□ 0.48
HOXD4-201ENST00000306324 VENTXO95231 258 aa18.07■□□□□ 0.48
HOXD4-201ENST00000306324 HOGA1Q86XE5 327 aa18.07■□□□□ 0.48
HOXD4-201ENST00000306324 BEST4Q8NFU0 473 aa18.07■□□□□ 0.48
HOXD4-201ENST00000306324 OR10J5Q8NHC4 309 aa18.07■□□□□ 0.48
HOXD4-201ENST00000306324 RPEQ96AT9 228 aa18.07■□□□□ 0.48
HOXD4-201ENST00000306324 CABLES2Q9BTV7 478 aa18.07■□□□□ 0.48
HOXD4-201ENST00000306324 MEGF9Q9H1U4 602 aa18.07■□□□□ 0.48
HOXD4-201ENST00000306324 IGHV4-59P01825 116 aa18.06■□□□□ 0.48
HOXD4-201ENST00000306324 IER3P46695 156 aa18.06■□□□□ 0.48
HOXD4-201ENST00000306324 TPTE2P1Q5T6R2 138 aa18.06■□□□□ 0.48
HOXD4-201ENST00000306324 ZDHHC22Q8N966 263 aa18.06■□□□□ 0.48
HOXD4-201ENST00000306324 SSMEM1Q8WWF3 244 aa18.06■□□□□ 0.48
HOXD4-201ENST00000306324 TOMM40LQ969M1 308 aa18.06■□□□□ 0.48
HOXD4-201ENST00000306324 SSX3Q99909 188 aa18.06■□□□□ 0.48
HOXD4-201ENST00000306324 GINS4Q9BRT9 223 aa18.06■□□□□ 0.48
HOXD4-201ENST00000306324 PARP12Q9H0J9 701 aaKnown RBP18.06■□□□□ 0.48
HOXD4-201ENST00000306324 ANXA10Q9UJ72 324 aa18.06■□□□□ 0.48
HOXD4-201ENST00000306324 A6NHS1 94 aa18.05■□□□□ 0.48
HOXD4-201ENST00000306324 LY6LH3BQJ8 138 aa18.05■□□□□ 0.48
HOXD4-201ENST00000306324 LPLP06858 475 aa18.05■□□□□ 0.48
HOXD4-201ENST00000306324 IL3RAP26951 378 aa18.05■□□□□ 0.48
HOXD4-201ENST00000306324 ARPC4P59998 168 aa18.05■□□□□ 0.48
HOXD4-201ENST00000306324 SLC9A3R2Q15599 337 aa18.05■□□□□ 0.48
HOXD4-201ENST00000306324 LRRC75BQ2VPJ9 315 aa18.05■□□□□ 0.48
HOXD4-201ENST00000306324 RNASE12Q5GAN4 147 aaKnown RBP18.05■□□□□ 0.48
HOXD4-201ENST00000306324 LY6G6FQ5SQ64 297 aa18.05■□□□□ 0.48
HOXD4-201ENST00000306324 LYG1Q8N1E2 194 aa18.05■□□□□ 0.48
HOXD4-201ENST00000306324 DPAGT1Q9H3H5 408 aa18.05■□□□□ 0.48
HOXD4-201ENST00000306324 RDH8Q9NYR8 311 aa18.05■□□□□ 0.48
HOXD4-201ENST00000306324 A3GALT2U3KPV4 340 aa18.05■□□□□ 0.48
HOXD4-201ENST00000306324 TRBV6-7A0A0A0MS04 114 aa18.04■□□□□ 0.48
HOXD4-201ENST00000306324 TNFSF8P32971 234 aa18.04■□□□□ 0.48
HOXD4-201ENST00000306324 S100A5P33763 92 aa18.04■□□□□ 0.48
HOXD4-201ENST00000306324 IL18Q14116 193 aa18.04■□□□□ 0.48
HOXD4-201ENST00000306324 DIAPH2-AS1Q14236 149 aa18.04■□□□□ 0.48
HOXD4-201ENST00000306324 GPX8Q8TED1 209 aa18.04■□□□□ 0.48
HOXD4-201ENST00000306324 SCPEP1Q9HB40 452 aa18.04■□□□□ 0.48
HOXD4-201ENST00000306324 ATRQ13535 2644 aa18.03■□□□□ 0.48
HOXD4-201ENST00000306324 BTBD17A6NE02 478 aa18.03■□□□□ 0.48
HOXD4-201ENST00000306324 H3BUX3 64 aa18.03■□□□□ 0.48
HOXD4-201ENST00000306324 ST8SIA5O15466 376 aa18.03■□□□□ 0.48
HOXD4-201ENST00000306324 DIRAS3O95661 229 aa18.03■□□□□ 0.48
HOXD4-201ENST00000306324 RAB13P51153 203 aa18.03■□□□□ 0.48
HOXD4-201ENST00000306324 C15orf40Q8WUR7 153 aa18.03■□□□□ 0.48
HOXD4-201ENST00000306324 EDARADDQ8WWZ3 215 aa18.03■□□□□ 0.48
HOXD4-201ENST00000306324 SNAPC3Q92966 411 aa18.03■□□□□ 0.48
HOXD4-201ENST00000306324 ABHD1Q96SE0 405 aa18.03■□□□□ 0.48
HOXD4-201ENST00000306324 ABCB10Q9NRK6 738 aa18.03■□□□□ 0.48
HOXD4-201ENST00000306324 HSD17B6O14756 317 aa18.02■□□□□ 0.48
HOXD4-201ENST00000306324 TPPPO94811 219 aa18.02■□□□□ 0.48
HOXD4-201ENST00000306324 CTXN2P0C2S0 81 aa18.02■□□□□ 0.48
HOXD4-201ENST00000306324 REG1BP48304 166 aa18.02■□□□□ 0.48
HOXD4-201ENST00000306324 ARHGDIBP52566 201 aa18.02■□□□□ 0.48
HOXD4-201ENST00000306324 CCDC144NLQ6NUI1 221 aa18.02■□□□□ 0.48
HOXD4-201ENST00000306324 C11orf54Q9H0W9 315 aaPredicted RBP18.02■□□□□ 0.48
HOXD4-201ENST00000306324 POMT1Q9Y6A1 747 aa18.02■□□□□ 0.48
HOXD4-201ENST00000306324 OOSP1A8MZH6 123 aa18.01■□□□□ 0.47
HOXD4-201ENST00000306324 SULT1C2O00338 296 aa18.01■□□□□ 0.47
HOXD4-201ENST00000306324 RAB7AP51149 207 aa18.01■□□□□ 0.47
HOXD4-201ENST00000306324 UBA52P62987 128 aaKnown RBP18.01■□□□□ 0.47
HOXD4-201ENST00000306324 AANATQ16613 207 aa18.01■□□□□ 0.47
HOXD4-201ENST00000306324 TMEM86BQ8N661 226 aa18.01■□□□□ 0.47
HOXD4-201ENST00000306324 IFI27L2Q9H2X8 130 aa18.01■□□□□ 0.47
HOXD4-201ENST00000306324 BATF3Q9NR55 127 aa18.01■□□□□ 0.47
HOXD4-201ENST00000306324 FABP12A6NFH5 140 aa18.01■□□□□ 0.47
HOXD4-201ENST00000306324 VGLL3A8MV65 326 aa18.01■□□□□ 0.47
HOXD4-201ENST00000306324 TRIM77I1YAP6 450 aa18.01■□□□□ 0.47
HOXD4-201ENST00000306324 PYHIN1Q6K0P9 492 aa18.01■□□□□ 0.47
HOXD4-201ENST00000306324 OR52I2Q8NH67 350 aa18.01■□□□□ 0.47
HOXD4-201ENST00000306324 OR5R1Q8NH85 324 aa18.01■□□□□ 0.47
HOXD4-201ENST00000306324 ST6GALNAC6Q969X2 333 aa18.01■□□□□ 0.47
HOXD4-201ENST00000306324 ABHD14BQ96IU4 210 aa18.01■□□□□ 0.47
HOXD4-201ENST00000306324 CHIAQ9BZP6 476 aa18.01■□□□□ 0.47
HOXD4-201ENST00000306324 ANAPC10Q9UM13 185 aa18.01■□□□□ 0.47
HOXD4-201ENST00000306324 CLDN34H7C241 214 aa18■□□□□ 0.47
HOXD4-201ENST00000306324 ITGB1BP1O14713 200 aa18■□□□□ 0.47
HOXD4-201ENST00000306324 GAPDHP04406 335 aaKnown RBP18■□□□□ 0.47
HOXD4-201ENST00000306324 BRS3P32247 399 aa18■□□□□ 0.47
HOXD4-201ENST00000306324 LY6EQ16553 131 aa18■□□□□ 0.47
HOXD4-201ENST00000306324 ODF3L1Q8IXM7 274 aa18■□□□□ 0.47
HOXD4-201ENST00000306324 H1FOOQ8IZA3 346 aaPredicted RBP18■□□□□ 0.47
HOXD4-201ENST00000306324 OR5AP2Q8NGF4 316 aa18■□□□□ 0.47
HOXD4-201ENST00000306324 RTN4IP1Q8WWV3 396 aaPredicted RBP18■□□□□ 0.47
HOXD4-201ENST00000306324 FCAMRQ8WWV6 532 aa18■□□□□ 0.47
HOXD4-201ENST00000306324 TOLLIPQ9H0E2 274 aa18■□□□□ 0.47
HOXD4-201ENST00000306324 NECAP2Q9NVZ3 263 aa18■□□□□ 0.47
HOXD4-201ENST00000306324 RABL2AQ9UBK7 228 aaPredicted RBP18■□□□□ 0.47
HOXD4-201ENST00000306324 RNF150Q9ULK6 438 aa18■□□□□ 0.47
HOXD4-201ENST00000306324 RABL2BQ9UNT1 228 aa18■□□□□ 0.47
HOXD4-201ENST00000306324 RBM7Q9Y580 266 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms