RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 UFD1Q92890 307 aa13.09□□□□□ -0.31
TRAPPC1-201ENST00000303731 SULT4A1Q9BR01 284 aa13.09□□□□□ -0.31
TRAPPC1-201ENST00000303731 GHITMQ9H3K2 345 aa13.09□□□□□ -0.31
TRAPPC1-201ENST00000303731 RIMS4Q9H426 269 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC1-201ENST00000303731 ZNF107Q9UII5 783 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC1-201ENST00000303731 TPRKBQ9Y3C4 175 aa13.09□□□□□ -0.31
TRAPPC1-201ENST00000303731 CCL24O00175 119 aa13.08□□□□□ -0.32
TRAPPC1-201ENST00000303731 RPLP1P05386 114 aaKnown RBP13.08□□□□□ -0.32
TRAPPC1-201ENST00000303731 UCHL1P09936 223 aa13.08□□□□□ -0.32
TRAPPC1-201ENST00000303731 CD37P11049 281 aa13.08□□□□□ -0.32
TRAPPC1-201ENST00000303731 PSMA1P25786 263 aaKnown RBP13.08□□□□□ -0.32
TRAPPC1-201ENST00000303731 PPP1CCP36873 323 aaKnown RBP13.08□□□□□ -0.32
TRAPPC1-201ENST00000303731 F2RL1P55085 397 aa13.08□□□□□ -0.32
TRAPPC1-201ENST00000303731 KRTAP10-11P60412 298 aa13.08□□□□□ -0.32
TRAPPC1-201ENST00000303731 CFHR3Q02985 330 aa13.08□□□□□ -0.32
TRAPPC1-201ENST00000303731 GNMTQ14749 295 aa13.08□□□□□ -0.32
TRAPPC1-201ENST00000303731 KIR2DS1Q14954 304 aa13.08□□□□□ -0.32
TRAPPC1-201ENST00000303731 ZNF833PQ6ZTB9 187 aa13.08□□□□□ -0.32
TRAPPC1-201ENST00000303731 C18orf65Q6ZTR6 163 aa13.08□□□□□ -0.32
TRAPPC1-201ENST00000303731 CEACAM19Q7Z692 300 aa13.08□□□□□ -0.32
TRAPPC1-201ENST00000303731 OR52L2PQ8NGH6 319 aa13.08□□□□□ -0.32
TRAPPC1-201ENST00000303731 URM1Q9BTM9 101 aaKnown RBP13.08□□□□□ -0.32
TRAPPC1-201ENST00000303731 PIPOXQ9P0Z9 390 aa13.08□□□□□ -0.32
TRAPPC1-201ENST00000303731 MGAT4AQ9UM21 535 aa13.08□□□□□ -0.32
TRAPPC1-201ENST00000303731 TMEM14DPA8MWL7 114 aa13.07□□□□□ -0.32
TRAPPC1-201ENST00000303731 ARL6IP5O75915 188 aa13.07□□□□□ -0.32
TRAPPC1-201ENST00000303731 NAPSAO96009 420 aa13.07□□□□□ -0.32
TRAPPC1-201ENST00000303731 HLA-DRB1P01911 266 aa13.07□□□□□ -0.32
TRAPPC1-201ENST00000303731 HOXD3P31249 432 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC1-201ENST00000303731 ACTBP60709 375 aa13.07□□□□□ -0.32
TRAPPC1-201ENST00000303731 INSL4Q14641 139 aa13.07□□□□□ -0.32
TRAPPC1-201ENST00000303731 FAM27D1Q5T7N8 215 aa13.07□□□□□ -0.32
TRAPPC1-201ENST00000303731 C6orf201Q7Z4U5 140 aa13.07□□□□□ -0.32
TRAPPC1-201ENST00000303731 ODF3L1Q8IXM7 274 aa13.07□□□□□ -0.32
TRAPPC1-201ENST00000303731 OR5M8Q8NGP6 311 aa13.07□□□□□ -0.32
TRAPPC1-201ENST00000303731 C4orf3Q8WVX3 66 aa13.07□□□□□ -0.32
TRAPPC1-201ENST00000303731 RAX2Q96IS3 184 aa13.07□□□□□ -0.32
TRAPPC1-201ENST00000303731 NABP2Q9BQ15 211 aa13.07□□□□□ -0.32
TRAPPC1-201ENST00000303731 HSPB9Q9BQS6 159 aa13.07□□□□□ -0.32
TRAPPC1-201ENST00000303731 ZNF251Q9BRH9 671 aa13.07□□□□□ -0.32
TRAPPC1-201ENST00000303731 FAAP24Q9BTP7 215 aa13.07□□□□□ -0.32
TRAPPC1-201ENST00000303731 CHMP1AQ9HD42 196 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC1-201ENST00000303731 ISYNA1Q9NPH2 558 aa13.07□□□□□ -0.32
TRAPPC1-201ENST00000303731 PLEKHJ1Q9NW61 149 aa13.07□□□□□ -0.32
TRAPPC1-201ENST00000303731 TRBV6-6A0A0A6YYG2 114 aa13.06□□□□□ -0.32
TRAPPC1-201ENST00000303731 RAMP3O60896 148 aa13.06□□□□□ -0.32
TRAPPC1-201ENST00000303731 PSMB8P28062 276 aa13.06□□□□□ -0.32
TRAPPC1-201ENST00000303731 BLVRBP30043 206 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC1-201ENST00000303731 UNC119Q13432 240 aa13.06□□□□□ -0.32
TRAPPC1-201ENST00000303731 IRF3Q14653 427 aa13.06□□□□□ -0.32
TRAPPC1-201ENST00000303731 DEFB121Q5J5C9 76 aa13.06□□□□□ -0.32
TRAPPC1-201ENST00000303731 LIPKQ5VXJ0 399 aa13.06□□□□□ -0.32
TRAPPC1-201ENST00000303731 OR10K2Q6IF99 312 aa13.06□□□□□ -0.32
TRAPPC1-201ENST00000303731 ZNF880Q6PDB4 577 aa13.06□□□□□ -0.32
TRAPPC1-201ENST00000303731 SVOPQ8N4V2 548 aa13.06□□□□□ -0.32
TRAPPC1-201ENST00000303731 KCTD7Q96MP8 289 aa13.06□□□□□ -0.32
TRAPPC1-201ENST00000303731 MRPL20Q9BYC9 149 aaKnown RBP13.06□□□□□ -0.32
TRAPPC1-201ENST00000303731 KIAA1456Q9P272 454 aa13.06□□□□□ -0.32
TRAPPC1-201ENST00000303731 SAA2-SAA4A0A096LPE2 208 aa13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 WI2-2373I1.2A0A1W2PRP0 233 aa13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 ERICH4A6NGS2 130 aa13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 ITGB1BP1O14713 200 aa13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 RAB29O14966 203 aa13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 NBR2O15453 112 aa13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 SAA2P0DJI9 122 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 SLC2A2P11168 524 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 ARSBP15848 533 aa13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 MYF6P23409 242 aa13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 QRFPP83859 136 aa13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 DGCR2P98153 550 aa13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 TPBGQ13641 420 aa13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 TMEM65Q6PI78 240 aa13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 NPBQ8NG41 125 aa13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 IL1F10Q8WWZ1 152 aa13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 IFI27L2Q9H2X8 130 aa13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 OR51J1Q9H342 316 aa13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 DUSP21Q9H596 190 aa13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 PLGRKTQ9HBL7 147 aa13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 SLC23A1Q9UHI7 598 aa13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 HSF4Q9ULV5 492 aa13.05□□□□□ -0.32
TRAPPC1-201ENST00000303731 OR5H14A6NHG9 310 aa13.04□□□□□ -0.32
TRAPPC1-201ENST00000303731 SLC17A2O00624 439 aa13.04□□□□□ -0.32
TRAPPC1-201ENST00000303731 RGS10O43665 173 aa13.04□□□□□ -0.32
TRAPPC1-201ENST00000303731 MC5RP33032 325 aa13.04□□□□□ -0.32
TRAPPC1-201ENST00000303731 AQP4P55087 323 aa13.04□□□□□ -0.32
TRAPPC1-201ENST00000303731 RAB25P57735 213 aa13.04□□□□□ -0.32
TRAPPC1-201ENST00000303731 C5orf64Q2M2E5 130 aa13.04□□□□□ -0.32
TRAPPC1-201ENST00000303731 C9orf66Q5T8R8 295 aa13.04□□□□□ -0.32
TRAPPC1-201ENST00000303731 LIN54Q6MZP7 749 aa13.04□□□□□ -0.32
TRAPPC1-201ENST00000303731 LCNL1Q6ZST4 164 aa13.04□□□□□ -0.32
TRAPPC1-201ENST00000303731 MYOZ3Q8TDC0 251 aa13.04□□□□□ -0.32
TRAPPC1-201ENST00000303731 EDARADDQ8WWZ3 215 aa13.04□□□□□ -0.32
TRAPPC1-201ENST00000303731 UBE2E2Q96LR5 201 aa13.04□□□□□ -0.32
TRAPPC1-201ENST00000303731 NICN1Q9BSH3 213 aa13.04□□□□□ -0.32
TRAPPC1-201ENST00000303731 VCX3BQ9H321 246 aa13.04□□□□□ -0.32
TRAPPC1-201ENST00000303731 RBBP9O75884 186 aa13.03□□□□□ -0.32
TRAPPC1-201ENST00000303731 NDUFA3O95167 84 aa13.03□□□□□ -0.32
TRAPPC1-201ENST00000303731 CPEP16870 476 aa13.03□□□□□ -0.32
TRAPPC1-201ENST00000303731 ZBTB25P24278 435 aa13.03□□□□□ -0.32
TRAPPC1-201ENST00000303731 OR3A3P47888 321 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms