RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 AJUBAQ96IF1 538 aa19.85■□□□□ 0.77
HOXC9-201ENST00000303450 ZNF48Q96MX3 618 aaPredicted RBP19.85■□□□□ 0.77
HOXC9-201ENST00000303450 GINS4Q9BRT9 223 aa19.85■□□□□ 0.77
HOXC9-201ENST00000303450 TRBV6-7A0A0A0MS04 114 aa19.84■□□□□ 0.77
HOXC9-201ENST00000303450 SLC31A2O15432 143 aa19.84■□□□□ 0.77
HOXC9-201ENST00000303450 CTXN2P0C2S0 81 aa19.84■□□□□ 0.77
HOXC9-201ENST00000303450 CEACAM3P40198 252 aa19.84■□□□□ 0.77
HOXC9-201ENST00000303450 ZNF134P52741 427 aa19.84■□□□□ 0.77
HOXC9-201ENST00000303450 SSX2Q16385 188 aa19.84■□□□□ 0.77
HOXC9-201ENST00000303450 RNASE12Q5GAN4 147 aaKnown RBP19.84■□□□□ 0.77
HOXC9-201ENST00000303450 CT45A1Q5HYN5 189 aa19.84■□□□□ 0.77
HOXC9-201ENST00000303450 LDLRAD2Q5SZI1 272 aa19.84■□□□□ 0.77
HOXC9-201ENST00000303450 FAM131AQ6UXB0 335 aa19.84■□□□□ 0.77
HOXC9-201ENST00000303450 OR6Q1Q8NGQ2 317 aa19.84■□□□□ 0.77
HOXC9-201ENST00000303450 CT45A3Q8NHU0 189 aa19.84■□□□□ 0.77
HOXC9-201ENST00000303450 ABHD14AQ9BUJ0 271 aa19.84■□□□□ 0.77
HOXC9-201ENST00000303450 IFNA2P01563 188 aa19.83■□□□□ 0.77
HOXC9-201ENST00000303450 MRPS10P82664 201 aaKnown RBP19.83■□□□□ 0.77
HOXC9-201ENST00000303450 TUSC1Q2TAM9 212 aa19.83■□□□□ 0.77
HOXC9-201ENST00000303450 FCAMRQ8WWV6 532 aa19.83■□□□□ 0.77
HOXC9-201ENST00000303450 EDARADDQ8WWZ3 215 aa19.83■□□□□ 0.77
HOXC9-201ENST00000303450 SNAPC3Q92966 411 aa19.83■□□□□ 0.77
HOXC9-201ENST00000303450 RDH8Q9NYR8 311 aa19.83■□□□□ 0.77
HOXC9-201ENST00000303450 HILPDAQ9Y5L2 63 aa19.83■□□□□ 0.77
HOXC9-201ENST00000303450 IL3RAP26951 378 aa19.82■□□□□ 0.76
HOXC9-201ENST00000303450 OR52I2Q8NH67 350 aa19.82■□□□□ 0.76
HOXC9-201ENST00000303450 ANAPC10Q9UM13 185 aa19.82■□□□□ 0.76
HOXC9-201ENST00000303450 JMJD1CQ15652 2540 aa19.82■□□□□ 0.76
HOXC9-201ENST00000303450 GABARAPH6UMI1 98 aa19.81■□□□□ 0.76
HOXC9-201ENST00000303450 PAX6P26367 422 aa19.81■□□□□ 0.76
HOXC9-201ENST00000303450 SPANXN2Q5MJ10 180 aa19.81■□□□□ 0.76
HOXC9-201ENST00000303450 CCDC190Q86UF4 302 aa19.81■□□□□ 0.76
HOXC9-201ENST00000303450 SOSTQ9BQB4 213 aa19.81■□□□□ 0.76
HOXC9-201ENST00000303450 PRDM13Q9H4Q3 707 aa19.81■□□□□ 0.76
HOXC9-201ENST00000303450 NAT1P18440 290 aa19.81■□□□□ 0.76
HOXC9-201ENST00000303450 RCVRNP35243 200 aa19.81■□□□□ 0.76
HOXC9-201ENST00000303450 TPTE2P1Q5T6R2 138 aa19.81■□□□□ 0.76
HOXC9-201ENST00000303450 Q6YL49 198 aa19.81■□□□□ 0.76
HOXC9-201ENST00000303450 LYG1Q8N1E2 194 aa19.81■□□□□ 0.76
HOXC9-201ENST00000303450 DYNAPQ8N1N2 210 aa19.81■□□□□ 0.76
HOXC9-201ENST00000303450 OR5AP2Q8NGF4 316 aa19.81■□□□□ 0.76
HOXC9-201ENST00000303450 RPEQ96AT9 228 aa19.81■□□□□ 0.76
HOXC9-201ENST00000303450 PARP12Q9H0J9 701 aaKnown RBP19.81■□□□□ 0.76
HOXC9-201ENST00000303450 C11orf54Q9H0W9 315 aaPredicted RBP19.81■□□□□ 0.76
HOXC9-201ENST00000303450 MEGF9Q9H1U4 602 aa19.81■□□□□ 0.76
HOXC9-201ENST00000303450 NECAP2Q9NVZ3 263 aa19.81■□□□□ 0.76
HOXC9-201ENST00000303450 CUBNO60494 3623 aa19.8■□□□□ 0.76
HOXC9-201ENST00000303450 LY6LH3BQJ8 138 aa19.8■□□□□ 0.76
HOXC9-201ENST00000303450 ITGB1BP1O14713 200 aa19.8■□□□□ 0.76
HOXC9-201ENST00000303450 CTDSPLO15194 276 aa19.8■□□□□ 0.76
HOXC9-201ENST00000303450 ST8SIA5O15466 376 aa19.8■□□□□ 0.76
HOXC9-201ENST00000303450 RBBP9O75884 186 aa19.8■□□□□ 0.76
HOXC9-201ENST00000303450 RAB7AP51149 207 aa19.8■□□□□ 0.76
HOXC9-201ENST00000303450 ACTBP60709 375 aa19.8■□□□□ 0.76
HOXC9-201ENST00000303450 ACTG1P63261 375 aa19.8■□□□□ 0.76
HOXC9-201ENST00000303450 DGCR2P98153 550 aa19.8■□□□□ 0.76
HOXC9-201ENST00000303450 TOMM40LQ969M1 308 aa19.8■□□□□ 0.76
HOXC9-201ENST00000303450 TOLLIPQ9H0E2 274 aa19.8■□□□□ 0.76
HOXC9-201ENST00000303450 KLK11Q9UBX7 282 aa19.8■□□□□ 0.76
HOXC9-201ENST00000303450 TCF21O43680 179 aa19.79■□□□□ 0.76
HOXC9-201ENST00000303450 HLA-DMAP28067 261 aa19.79■□□□□ 0.76
HOXC9-201ENST00000303450 OR3A3P47888 321 aa19.79■□□□□ 0.76
HOXC9-201ENST00000303450 TAS2R46P59540 309 aa19.79■□□□□ 0.76
HOXC9-201ENST00000303450 BAMBIQ13145 260 aa19.79■□□□□ 0.76
HOXC9-201ENST00000303450 PLA1AQ53H76 456 aa19.79■□□□□ 0.76
HOXC9-201ENST00000303450 LDLRAD3Q86YD5 345 aa19.79■□□□□ 0.76
HOXC9-201ENST00000303450 H1FOOQ8IZA3 346 aaPredicted RBP19.79■□□□□ 0.76
HOXC9-201ENST00000303450 SMIM4Q8WVI0 70 aa19.79■□□□□ 0.76
HOXC9-201ENST00000303450 MTFP1Q9UDX5 166 aa19.79■□□□□ 0.76
HOXC9-201ENST00000303450 CDK10Q15131 360 aa19.78■□□□□ 0.76
HOXC9-201ENST00000303450 CCDC144NLQ6NUI1 221 aa19.78■□□□□ 0.76
HOXC9-201ENST00000303450 OR5H2Q8NGV7 314 aa19.78■□□□□ 0.76
HOXC9-201ENST00000303450 JMJD8Q96S16 334 aa19.78■□□□□ 0.76
HOXC9-201ENST00000303450 V9GYH0 126 aa19.78■□□□□ 0.76
HOXC9-201ENST00000303450 NF1P21359 2839 aa19.78■□□□□ 0.76
HOXC9-201ENST00000303450 OOSP1A8MZH6 123 aa19.77■□□□□ 0.76
HOXC9-201ENST00000303450 NFYAP23511 347 aaPredicted RBP19.77■□□□□ 0.76
HOXC9-201ENST00000303450 ETV6P41212 452 aa19.77■□□□□ 0.76
HOXC9-201ENST00000303450 ARHGDIBP52566 201 aa19.77■□□□□ 0.76
HOXC9-201ENST00000303450 HILS1P60008 231 aa19.77■□□□□ 0.76
HOXC9-201ENST00000303450 PYDC2Q56P42 97 aa19.77■□□□□ 0.76
HOXC9-201ENST00000303450 LYSMD2Q8IV50 215 aa19.77■□□□□ 0.76
HOXC9-201ENST00000303450 SSMEM1Q8WWF3 244 aa19.77■□□□□ 0.76
HOXC9-201ENST00000303450 SSX3Q99909 188 aa19.77■□□□□ 0.76
HOXC9-201ENST00000303450 IFI27L2Q9H2X8 130 aa19.77■□□□□ 0.76
HOXC9-201ENST00000303450 PTTG2Q9NZH5 202 aa19.77■□□□□ 0.76
HOXC9-201ENST00000303450 RBM7Q9Y580 266 aaKnown RBP19.77■□□□□ 0.76
HOXC9-201ENST00000303450 A0A0A6YYJ9 748 aa19.76■□□□□ 0.75
HOXC9-201ENST00000303450 HSD17B6O14756 317 aa19.76■□□□□ 0.75
HOXC9-201ENST00000303450 HOXA3O43365 443 aaPredicted RBP19.76■□□□□ 0.75
HOXC9-201ENST00000303450 PMP2P02689 132 aa19.76■□□□□ 0.75
HOXC9-201ENST00000303450 OR5H8P0DN80 308 aa19.76■□□□□ 0.75
HOXC9-201ENST00000303450 PTBP1P26599 531 aaKnown RBP eCLIP19.76■□□□□ 0.75
HOXC9-201ENST00000303450 IER3P46695 156 aa19.76■□□□□ 0.75
HOXC9-201ENST00000303450 DIAPH2-AS1Q14236 149 aa19.76■□□□□ 0.75
HOXC9-201ENST00000303450 LRRC75BQ2VPJ9 315 aa19.76■□□□□ 0.75
HOXC9-201ENST00000303450 ST6GALNAC6Q969X2 333 aa19.76■□□□□ 0.75
HOXC9-201ENST00000303450 AGMATQ9BSE5 352 aa19.76■□□□□ 0.75
HOXC9-201ENST00000303450 DPAGT1Q9H3H5 408 aa19.76■□□□□ 0.75
HOXC9-201ENST00000303450 GHITMQ9H3K2 345 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms