RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 CGB3P0DN86 165 aa18.52■□□□□ 0.56
SMAD1-201ENST00000302085 CGB7P0DN87 165 aa18.52■□□□□ 0.56
SMAD1-201ENST00000302085 PLA2G5P39877 138 aa18.52■□□□□ 0.56
SMAD1-201ENST00000302085 FAM216BQ8N7L0 139 aa18.52■□□□□ 0.56
SMAD1-201ENST00000302085 RBPMSQ93062 196 aaKnown RBP18.52■□□□□ 0.56
SMAD1-201ENST00000302085 IL22RA2Q969J5 263 aa18.52■□□□□ 0.56
SMAD1-201ENST00000302085 C5orf30Q96GV9 206 aa18.52■□□□□ 0.56
SMAD1-201ENST00000302085 LSM5Q9Y4Y9 91 aaKnown RBP18.52■□□□□ 0.56
SMAD1-201ENST00000302085 ARID1AO14497 2285 aa18.52■□□□□ 0.56
SMAD1-201ENST00000302085 TMEM178BH3BS89 294 aa18.51■□□□□ 0.55
SMAD1-201ENST00000302085 LGALS8O00214 317 aa18.51■□□□□ 0.55
SMAD1-201ENST00000302085 B3GALNT1O75752 331 aa18.51■□□□□ 0.55
SMAD1-201ENST00000302085 SCGB1D2O95969 90 aa18.51■□□□□ 0.55
SMAD1-201ENST00000302085 OR4D5Q8NGN0 318 aa18.51■□□□□ 0.55
SMAD1-201ENST00000302085 C14orf79Q96F83 325 aa18.51■□□□□ 0.55
SMAD1-201ENST00000302085 RAI1Q7Z5J4 1906 aaPredicted RBP18.51■□□□□ 0.55
SMAD1-201ENST00000302085 PKDREJQ9NTG1 2253 aa18.51■□□□□ 0.55
SMAD1-201ENST00000302085 LTC4SQ16873 150 aa18.51■□□□□ 0.55
SMAD1-201ENST00000302085 SWI5Q1ZZU3 235 aa18.51■□□□□ 0.55
SMAD1-201ENST00000302085 ZNF645Q8N7E2 425 aa18.51■□□□□ 0.55
SMAD1-201ENST00000302085 AQP10Q96PS8 301 aa18.51■□□□□ 0.55
SMAD1-201ENST00000302085 FAM234AQ9H0X4 552 aa18.51■□□□□ 0.55
SMAD1-201ENST00000302085 OR2D2Q9H210 308 aa18.51■□□□□ 0.55
SMAD1-201ENST00000302085 DUXBA0A1W2PPF3 345 aa18.5■□□□□ 0.55
SMAD1-201ENST00000302085 K7EPK0 472 aa18.5■□□□□ 0.55
SMAD1-201ENST00000302085 SIGLEC5O15389 551 aa18.5■□□□□ 0.55
SMAD1-201ENST00000302085 ZNF672Q499Z4 452 aaPredicted RBP18.5■□□□□ 0.55
SMAD1-201ENST00000302085 ESCO2Q56NI9 601 aa18.5■□□□□ 0.55
SMAD1-201ENST00000302085 NMSQ5H8A3 153 aa18.5■□□□□ 0.55
SMAD1-201ENST00000302085 FAM71E2Q8N5Q1 922 aa18.5■□□□□ 0.55
SMAD1-201ENST00000302085 PCNPQ8WW12 178 aaKnown RBP18.5■□□□□ 0.55
SMAD1-201ENST00000302085 CCL17Q92583 94 aa18.5■□□□□ 0.55
SMAD1-201ENST00000302085 TMEM204Q9BSN7 226 aa18.5■□□□□ 0.55
SMAD1-201ENST00000302085 TMEM106BQ9NUM4 274 aa18.5■□□□□ 0.55
SMAD1-201ENST00000302085 OR6C3Q9NZP0 311 aa18.5■□□□□ 0.55
SMAD1-201ENST00000302085 RPS10-NUDT3A0A1W2PQS6 291 aa18.5■□□□□ 0.55
SMAD1-201ENST00000302085 SPDEFO95238 335 aa18.5■□□□□ 0.55
SMAD1-201ENST00000302085 RLN2P04090 185 aa18.5■□□□□ 0.55
SMAD1-201ENST00000302085 VDAC1P21796 283 aa18.5■□□□□ 0.55
SMAD1-201ENST00000302085 UQCRFS1P47985 274 aa18.5■□□□□ 0.55
SMAD1-201ENST00000302085 EIF4EBP1Q13541 118 aaPredicted RBP18.5■□□□□ 0.55
SMAD1-201ENST00000302085 ALKAL2Q6UX46 152 aa18.5■□□□□ 0.55
SMAD1-201ENST00000302085 FGFRL1Q8N441 504 aa18.5■□□□□ 0.55
SMAD1-201ENST00000302085 ZBTB34Q8NCN2 500 aa18.5■□□□□ 0.55
SMAD1-201ENST00000302085 ARPC5LQ9BPX5 153 aa18.5■□□□□ 0.55
SMAD1-201ENST00000302085 ADAM20O43506 726 aa18.49■□□□□ 0.55
SMAD1-201ENST00000302085 SERPINE2P07093 398 aa18.49■□□□□ 0.55
SMAD1-201ENST00000302085 GNLYP22749 145 aa18.49■□□□□ 0.55
SMAD1-201ENST00000302085 NUP62P37198 522 aaPredicted RBP18.49■□□□□ 0.55
SMAD1-201ENST00000302085 ZNF585BQ52M93 769 aa18.49■□□□□ 0.55
SMAD1-201ENST00000302085 C1orf87Q8N0U7 546 aa18.49■□□□□ 0.55
SMAD1-201ENST00000302085 ST8SIA2Q92186 375 aa18.49■□□□□ 0.55
SMAD1-201ENST00000302085 ARFGEF3Q5TH69 2177 aa18.49■□□□□ 0.55
SMAD1-201ENST00000302085 PPIAL4EA0A075B759 164 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 TRAV38-1A0A0B4J264 116 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 PPIAL4DF5H284 164 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 F2RL2O00254 374 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 IGKV1-39P01597 117 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 IGKV1D-39P04432 117 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 PPIAL4FP0DN26 164 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 HKR1P10072 659 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 ZNF16P17020 682 aaPredicted RBP18.48■□□□□ 0.55
SMAD1-201ENST00000302085 LOXL3P58215 753 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 SMCO1Q147U7 214 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 C17orf58Q2M2W7 97 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 ZNF808Q8N4W9 903 aaPredicted RBP18.48■□□□□ 0.55
SMAD1-201ENST00000302085 GALNT11Q8NCW6 608 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 AGMATQ9BSE5 352 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 GSX2Q9BZM3 304 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 CALYQ9NYX4 217 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 PPIAL4AQ9Y536 164 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 ADGRG4Q8IZF6 3080 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 CLEC18AA5D8T8 446 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 TNFRSF13BO14836 293 aaPredicted RBP18.48■□□□□ 0.55
SMAD1-201ENST00000302085 UBA52P62987 128 aaKnown RBP18.48■□□□□ 0.55
SMAD1-201ENST00000302085 MORN2Q502X0 79 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 CLLU1Q5K131 121 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 MUC15Q8N387 334 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 CLEC18CQ8NCF0 446 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 ZNF471Q9BX82 626 aaPredicted RBP18.48■□□□□ 0.55
SMAD1-201ENST00000302085 PLEKHF2Q9H8W4 249 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 PSG11Q9UQ72 335 aa18.48■□□□□ 0.55
SMAD1-201ENST00000302085 HCFC1P51610 2035 aa18.47■□□□□ 0.55
SMAD1-201ENST00000302085 F5H0A9 414 aaPredicted RBP18.47■□□□□ 0.55
SMAD1-201ENST00000302085 ST8SIA5O15466 376 aa18.47■□□□□ 0.55
SMAD1-201ENST00000302085 MSMO1Q15800 293 aa18.47■□□□□ 0.55
SMAD1-201ENST00000302085 C4orf17Q53FE4 359 aa18.47■□□□□ 0.55
SMAD1-201ENST00000302085 TCF23Q7RTU1 214 aa18.47■□□□□ 0.55
SMAD1-201ENST00000302085 SCARB1Q8WTV0 552 aa18.47■□□□□ 0.55
SMAD1-201ENST00000302085 CYTL1Q9NRR1 136 aa18.47■□□□□ 0.55
SMAD1-201ENST00000302085 JPT1Q9UK76 154 aa18.47■□□□□ 0.55
SMAD1-201ENST00000302085 ANKHD1Q8IWZ3 2542 aaKnown RBP18.47■□□□□ 0.55
SMAD1-201ENST00000302085 A0A0G2JRQ6 117 aa18.46■□□□□ 0.55
SMAD1-201ENST00000302085 ST8SIA3O43173 380 aa18.46■□□□□ 0.55
SMAD1-201ENST00000302085 YPEL1O60688 119 aa18.46■□□□□ 0.55
SMAD1-201ENST00000302085 OMGP23515 440 aa18.46■□□□□ 0.55
SMAD1-201ENST00000302085 RPL30P62888 115 aaKnown RBP18.46■□□□□ 0.55
SMAD1-201ENST00000302085 ABHD14BQ96IU4 210 aa18.46■□□□□ 0.55
SMAD1-201ENST00000302085 YPEL2Q96QA6 119 aa18.46■□□□□ 0.55
SMAD1-201ENST00000302085 SPIN2AQ99865 258 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms