RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 RPL19P84098 196 aaKnown RBP12.35□□□□□ -0.43
CDT1-201ENST00000301019 EIF3IQ13347 325 aaKnown RBP12.35□□□□□ -0.43
CDT1-201ENST00000301019 SLC46A1Q96NT5 459 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 CLEC1BQ9P126 229 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 USF3Q68DE3 2245 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 IGHV3-15A0A0B4J1V0 119 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 J3QW42 95 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 IFNA1P01562 189 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 NPPCP23582 126 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 KIR2DS3Q14952 304 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 FNDC7Q5VTL7 733 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 TEX43Q6ZNM6 134 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 Q6ZPA2 131 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 CISD2Q8N5K1 135 aaKnown RBP12.35□□□□□ -0.43
CDT1-201ENST00000301019 LIPHQ8WWY8 451 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 MOB3AQ96BX8 217 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 RNF2Q99496 336 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 CACNG5Q9UF02 275 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 ZFHX4Q86UP3 3567 aa12.35□□□□□ -0.43
CDT1-201ENST00000301019 RALGAPA1Q6GYQ0 2036 aa12.34□□□□□ -0.43
CDT1-201ENST00000301019 RBFOX2O43251 390 aaKnown RBP eCLIP12.34□□□□□ -0.43
CDT1-201ENST00000301019 CRIP3Q6Q6R5 217 aa12.34□□□□□ -0.43
CDT1-201ENST00000301019 OR5L2Q8NGL0 311 aa12.34□□□□□ -0.43
CDT1-201ENST00000301019 OR5P3Q8WZ94 311 aa12.34□□□□□ -0.43
CDT1-201ENST00000301019 RCHY1Q96PM5 261 aa12.34□□□□□ -0.43
CDT1-201ENST00000301019 MCRIP2Q9BUT9 160 aaKnown RBP12.34□□□□□ -0.43
CDT1-201ENST00000301019 TMEM222Q9H0R3 208 aa12.34□□□□□ -0.43
CDT1-201ENST00000301019 CLDN16Q9Y5I7 305 aa12.34□□□□□ -0.43
CDT1-201ENST00000301019 COX11Q9Y6N1 276 aa12.34□□□□□ -0.43
CDT1-201ENST00000301019 DUXBA0A1W2PPF3 345 aa12.34□□□□□ -0.43
CDT1-201ENST00000301019 OR2T8A6NH00 312 aa12.34□□□□□ -0.43
CDT1-201ENST00000301019 TMEM150CB9EJG8 249 aa12.34□□□□□ -0.43
CDT1-201ENST00000301019 Q56UQ5 140 aa12.34□□□□□ -0.43
CDT1-201ENST00000301019 FAM89BQ8N5H3 189 aa12.34□□□□□ -0.43
CDT1-201ENST00000301019 IFI44Q8TCB0 444 aa12.34□□□□□ -0.43
CDT1-201ENST00000301019 WDYHV1Q96HA8 205 aa12.34□□□□□ -0.43
CDT1-201ENST00000301019 SIGLEC12Q96PQ1 595 aa12.34□□□□□ -0.43
CDT1-201ENST00000301019 UHRF2Q96PU4 802 aa12.34□□□□□ -0.43
CDT1-201ENST00000301019 KCNK17Q96T54 332 aa12.34□□□□□ -0.43
CDT1-201ENST00000301019 MRPL18Q9H0U6 180 aaKnown RBP12.34□□□□□ -0.43
CDT1-201ENST00000301019 PSENENQ9NZ42 101 aa12.34□□□□□ -0.43
CDT1-201ENST00000301019 CXorf51AA0A1B0GTR3 108 aa12.33□□□□□ -0.43
CDT1-201ENST00000301019 HOXB2P14652 356 aa12.33□□□□□ -0.43
CDT1-201ENST00000301019 PSG4Q00888 419 aa12.33□□□□□ -0.43
CDT1-201ENST00000301019 SNAI3Q3KNW1 292 aa12.33□□□□□ -0.43
CDT1-201ENST00000301019 CCDC71LQ8N9Z2 235 aa12.33□□□□□ -0.43
CDT1-201ENST00000301019 PYGO2Q9BRQ0 406 aa12.33□□□□□ -0.43
CDT1-201ENST00000301019 CST9LQ9H4G1 147 aa12.33□□□□□ -0.43
CDT1-201ENST00000301019 TAAR3PQ9P1P4 343 aa12.33□□□□□ -0.43
CDT1-201ENST00000301019 SLC17A4Q9Y2C5 497 aa12.33□□□□□ -0.43
CDT1-201ENST00000301019 R4GN57 208 aa12.33□□□□□ -0.43
CDT1-201ENST00000301019 SNURFLB1AK76 121 aa12.33□□□□□ -0.44
CDT1-201ENST00000301019 C11orf94C9JXX5 98 aa12.33□□□□□ -0.44
CDT1-201ENST00000301019 SNAI2O43623 268 aa12.33□□□□□ -0.44
CDT1-201ENST00000301019 CD38P28907 300 aa12.33□□□□□ -0.44
CDT1-201ENST00000301019 BAXQ07812 192 aa12.33□□□□□ -0.44
CDT1-201ENST00000301019 WDR74Q6RFH5 385 aaPredicted RBP12.33□□□□□ -0.44
CDT1-201ENST00000301019 TGIF2LYQ8IUE0 185 aa12.33□□□□□ -0.44
CDT1-201ENST00000301019 ADPRHL1Q8NDY3 354 aa12.33□□□□□ -0.44
CDT1-201ENST00000301019 MEGF9Q9H1U4 602 aa12.33□□□□□ -0.44
CDT1-201ENST00000301019 IL36RNQ9UBH0 155 aa12.33□□□□□ -0.44
CDT1-201ENST00000301019 ZNF814B7Z6K7 855 aa12.33□□□□□ -0.44
CDT1-201ENST00000301019 PSG2P11465 335 aa12.33□□□□□ -0.44
CDT1-201ENST00000301019 ACSM6Q6P461 480 aa12.33□□□□□ -0.44
CDT1-201ENST00000301019 H1FNTQ75WM6 255 aaPredicted RBP12.33□□□□□ -0.44
CDT1-201ENST00000301019 HAPLN4Q86UW8 402 aa12.33□□□□□ -0.44
CDT1-201ENST00000301019 OBP2AQ9NY56 170 aa12.33□□□□□ -0.44
CDT1-201ENST00000301019 PXMP4Q9Y6I8 212 aa12.33□□□□□ -0.44
CDT1-201ENST00000301019 TRAV38-1A0A0B4J264 116 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 YPEL1O60688 119 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 RBMXL2O75526 392 aaKnown RBP12.32□□□□□ -0.44
CDT1-201ENST00000301019 CLDN1O95832 211 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 SERPINE2P07093 398 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 COMPP49747 757 aaPredicted RBP12.32□□□□□ -0.44
CDT1-201ENST00000301019 YPEL2Q96QA6 119 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 PRO3102Q9H379 93 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 PLEK2Q9NYT0 353 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 PPP1R3CQ9UQK1 317 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 IGKV1-27A0A075B6S5 117 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 CLEC18AA5D8T8 446 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 VAMP5O95183 116 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 GLB1P16278 677 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 NPBWR2P48146 333 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 PPOXP50336 477 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 RPL15P61313 204 aaKnown RBP12.32□□□□□ -0.44
CDT1-201ENST00000301019 OCIAD2Q56VL3 154 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 AMMECR1LQ6DCA0 310 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 CLEC18CQ8NCF0 446 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 GPR146Q96CH1 333 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 IL19Q9UHD0 177 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 KITLGP21583 273 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 RAC1P63000 192 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 KRTCAP3Q53RY4 240 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 DOK3Q7L591 496 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 PCED1AQ9H1Q7 454 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 ZNF586Q9NXT0 402 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 UQCR10Q9UDW1 63 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 WASHC3Q9Y3C0 194 aa12.32□□□□□ -0.44
CDT1-201ENST00000301019 SMPD2O60906 423 aa12.31□□□□□ -0.44
CDT1-201ENST00000301019 WNT2P09544 360 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms