RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 TMEM42Q69YG0 159 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 ABCA7Q8IZY2 2146 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 OR10G9Q8NGN4 311 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 OR10G7Q8NGN6 311 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 ALKBH3Q96Q83 286 aaPredicted RBP11.1□□□□□ -0.63
TVP23A-201ENST00000299866 MIEN1Q9BRT3 115 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 MSL2Q9HCI7 577 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 IL36GQ9NZH8 169 aa11.1□□□□□ -0.63
TVP23A-201ENST00000299866 HS3ST1O14792 307 aa11.09□□□□□ -0.63
TVP23A-201ENST00000299866 IGKV1-39P01597 117 aa11.09□□□□□ -0.63
TVP23A-201ENST00000299866 IGKV1D-39P04432 117 aa11.09□□□□□ -0.63
TVP23A-201ENST00000299866 TYMSP04818 313 aa11.09□□□□□ -0.63
TVP23A-201ENST00000299866 LINC00614P0C842 121 aa11.09□□□□□ -0.63
TVP23A-201ENST00000299866 HNF1AP20823 631 aa11.09□□□□□ -0.63
TVP23A-201ENST00000299866 CD38P28907 300 aa11.09□□□□□ -0.63
TVP23A-201ENST00000299866 MPLP40238 635 aa11.09□□□□□ -0.63
TVP23A-201ENST00000299866 UBE2G2P60604 165 aa11.09□□□□□ -0.63
TVP23A-201ENST00000299866 NEIL1Q96FI4 390 aaPredicted RBP11.09□□□□□ -0.63
TVP23A-201ENST00000299866 SGCZQ96LD1 299 aa11.09□□□□□ -0.63
TVP23A-201ENST00000299866 TMEM106BQ9NUM4 274 aa11.09□□□□□ -0.63
TVP23A-201ENST00000299866 ADMP35318 185 aa11.09□□□□□ -0.63
TVP23A-201ENST00000299866 RPL15P61313 204 aaKnown RBP11.09□□□□□ -0.63
TVP23A-201ENST00000299866 Q6ZWC4 215 aa11.09□□□□□ -0.63
TVP23A-201ENST00000299866 IMMP2LQ96T52 175 aa11.09□□□□□ -0.63
TVP23A-201ENST00000299866 KIR2DS1A0A191URI9 304 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 hCG_38984A0A1B0GV85 526 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 LOC102725191A0A1B0GVB3 256 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 ZFAND5O76080 213 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 C1QTNF9P0C862 333 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 CCNOP22674 350 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 NPPCP23582 126 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 CDKN1AP38936 164 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 KIR2DS4P43632 304 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 HNRNPKP61978 463 aaKnown RBP eCLIP11.08□□□□□ -0.64
TVP23A-201ENST00000299866 KIR2DS1Q14954 304 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 Q6ZS52 159 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 C11orf42Q8N5U0 333 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 FGFBP3Q8TAT2 258 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 RDH5Q92781 318 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 WDYHV1Q96HA8 205 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 HSPB9Q9BQS6 159 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 CD207Q9UJ71 328 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 IGHV1OR21-1A0A087WYE8 117 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 TNFSF13O75888 250 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 NAPSAO96009 420 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 IGKV1-5P01602 117 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 CD82P27701 267 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 FFAR4Q5NUL3 377 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 RHBDD2Q6NTF9 364 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 C20orf204Q6ZNR8 217 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 VAMP8Q9BV40 100 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 CHRNA10Q9GZZ6 450 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 ZDHHC11Q9H8X9 412 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 GPR35Q9HC97 309 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 PXMP4Q9Y6I8 212 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 CTXND1A0A1B0GTU2 59 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 C11orf94C9JXX5 98 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 TNFSF11O14788 317 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 GPM6AP51674 278 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 PSG4Q00888 419 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 FOXL2NBQ6ZUU3 175 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 ZIC4Q8N9L1 334 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 SGMS2Q8NHU3 365 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 ZNF501Q96CX3 271 aaPredicted RBP11.08□□□□□ -0.64
TVP23A-201ENST00000299866 RIMS4Q9H426 269 aaPredicted RBP11.08□□□□□ -0.64
TVP23A-201ENST00000299866 KCNS2Q9ULS6 477 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 MMP17Q9ULZ9 603 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 ATP23Q9Y6H3 246 aa11.08□□□□□ -0.64
TVP23A-201ENST00000299866 TRIOO75962 3097 aa11.07□□□□□ -0.64
TVP23A-201ENST00000299866 PLXDC1Q8IUK5 500 aa11.07□□□□□ -0.64
TVP23A-201ENST00000299866 DERL1Q9BUN8 251 aa11.07□□□□□ -0.64
TVP23A-201ENST00000299866 DEFB126Q9BYW3 111 aa11.07□□□□□ -0.64
TVP23A-201ENST00000299866 DNAJC4Q9NNZ3 241 aa11.07□□□□□ -0.64
TVP23A-201ENST00000299866 SPTBN5Q9NRC6 3674 aaKnown RBP11.07□□□□□ -0.64
TVP23A-201ENST00000299866 ACSF3Q4G176 576 aaPredicted RBP11.07□□□□□ -0.64
TVP23A-201ENST00000299866 PCSK4Q6UW60 755 aa11.07□□□□□ -0.64
TVP23A-201ENST00000299866 CLDN23Q96B33 292 aa11.07□□□□□ -0.64
TVP23A-201ENST00000299866 OR1A1Q9P1Q5 309 aa11.07□□□□□ -0.64
TVP23A-201ENST00000299866 OR2W1Q9Y3N9 320 aa11.07□□□□□ -0.64
TVP23A-201ENST00000299866 LCN2P80188 198 aa11.07□□□□□ -0.64
TVP23A-201ENST00000299866 RNPS1Q15287 305 aaKnown RBP11.07□□□□□ -0.64
TVP23A-201ENST00000299866 SPACA9Q96E40 222 aaPredicted RBP11.07□□□□□ -0.64
TVP23A-201ENST00000299866 ZNF488Q96MN9 340 aa11.07□□□□□ -0.64
TVP23A-201ENST00000299866 TMEM9BQ9NQ34 198 aa11.07□□□□□ -0.64
TVP23A-201ENST00000299866 RYDENQ9NUL5 291 aaKnown RBP11.07□□□□□ -0.64
TVP23A-201ENST00000299866 CFAP54Q96N23 3096 aa11.07□□□□□ -0.64
TVP23A-201ENST00000299866 IGLV3-32A0A0A0MS00 114 aa11.06□□□□□ -0.64
TVP23A-201ENST00000299866 CRYABP02511 175 aaKnown RBP11.06□□□□□ -0.64
TVP23A-201ENST00000299866 CTXN2P0C2S0 81 aa11.06□□□□□ -0.64
TVP23A-201ENST00000299866 RAB7AP51149 207 aa11.06□□□□□ -0.64
TVP23A-201ENST00000299866 TPPP2P59282 170 aa11.06□□□□□ -0.64
TVP23A-201ENST00000299866 TMEM183BQ1AE95 376 aa11.06□□□□□ -0.64
TVP23A-201ENST00000299866 RNF138Q8WVD3 245 aa11.06□□□□□ -0.64
TVP23A-201ENST00000299866 CRIM1Q9NZV1 1036 aa11.06□□□□□ -0.64
TVP23A-201ENST00000299866 COL5A1P20908 1838 aaPredicted RBP11.06□□□□□ -0.64
TVP23A-201ENST00000299866 EML6Q6ZMW3 1958 aa11.06□□□□□ -0.64
TVP23A-201ENST00000299866 NDUFB4O95168 129 aa11.06□□□□□ -0.64
TVP23A-201ENST00000299866 TIAF1O95411 115 aa11.06□□□□□ -0.64
TVP23A-201ENST00000299866 NTF4P34130 210 aa11.06□□□□□ -0.64
TVP23A-201ENST00000299866 CLDN15P56746 228 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms