RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 ZNF808Q8N4W9 903 aaPredicted RBP12.77□□□□□ -0.36
SPIDR-201ENST00000297423 ZNF385AQ96PM9 386 aaKnown RBP12.77□□□□□ -0.36
SPIDR-201ENST00000297423 DEFB126Q9BYW3 111 aa12.77□□□□□ -0.36
SPIDR-201ENST00000297423 SERTAD4Q9NUC0 356 aa12.77□□□□□ -0.36
SPIDR-201ENST00000297423 POLR3KQ9Y2Y1 108 aaPredicted RBP12.77□□□□□ -0.36
SPIDR-201ENST00000297423 OR6C6A6NF89 314 aa12.77□□□□□ -0.37
SPIDR-201ENST00000297423 C1QTNF9BB2RNN3 333 aa12.77□□□□□ -0.37
SPIDR-201ENST00000297423 HRASP01112 189 aa12.77□□□□□ -0.37
SPIDR-201ENST00000297423 RAB7AP51149 207 aa12.77□□□□□ -0.37
SPIDR-201ENST00000297423 HTD2P86397 168 aa12.77□□□□□ -0.37
SPIDR-201ENST00000297423 VAMP3Q15836 100 aa12.77□□□□□ -0.37
SPIDR-201ENST00000297423 LYPD6Q86Y78 171 aa12.77□□□□□ -0.37
SPIDR-201ENST00000297423 TNRC18O15417 2968 aaPredicted RBP12.77□□□□□ -0.37
SPIDR-201ENST00000297423 GCH1P30793 250 aa12.77□□□□□ -0.37
SPIDR-201ENST00000297423 RPL23P62829 140 aaKnown RBP12.77□□□□□ -0.37
SPIDR-201ENST00000297423 EIF3IQ13347 325 aaKnown RBP12.77□□□□□ -0.37
SPIDR-201ENST00000297423 MMDQ15546 238 aa12.77□□□□□ -0.37
SPIDR-201ENST00000297423 ZNF501Q96CX3 271 aaPredicted RBP12.77□□□□□ -0.37
SPIDR-201ENST00000297423 OR4C12Q96R67 309 aa12.77□□□□□ -0.37
SPIDR-201ENST00000297423 CTDSP1Q9GZU7 261 aa12.77□□□□□ -0.37
SPIDR-201ENST00000297423 NPIPB7O75200 414 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 PDCD6O75340 191 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 CHRNB4P30926 498 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 FFAR4Q5NUL3 377 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 SIGLECL1Q8N7X8 197 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 OR6X1Q8NH79 312 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 ARRDC1-AS1Q9H2J1 176 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 EYSQ5T1H1 3165 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 CEACAM18A8MTB9 384 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 MPLP40238 635 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 HNRNPA3P51991 378 aaKnown RBP12.76□□□□□ -0.37
SPIDR-201ENST00000297423 SUMO1P63165 101 aaKnown RBP12.76□□□□□ -0.37
SPIDR-201ENST00000297423 RELQ04864 619 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-201ENST00000297423 TMEM183BQ1AE95 376 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 ZNF611Q8N823 705 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 TMEM105Q8N8V8 129 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 BEND2Q8NDZ0 799 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 OR5D13Q8NGL4 314 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 ZNF837Q96EG3 531 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-201ENST00000297423 PLPPR2Q96GM1 343 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 ACTR3CQ9C0K3 210 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-201ENST00000297423 OR2J1Q9GZK6 312 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 CBLN1P23435 193 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 LTC4SQ16873 150 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 FAM89BQ8N5H3 189 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 OR4D5Q8NGN0 318 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 OR10G4Q8NGN3 311 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 OR10G9Q8NGN4 311 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 OR10G7Q8NGN6 311 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 ST8SIA1Q92185 356 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 MOB3AQ96BX8 217 aa12.76□□□□□ -0.37
SPIDR-201ENST00000297423 IGKV1D-13A0A0B4J2D9 117 aa12.75□□□□□ -0.37
SPIDR-201ENST00000297423 IGKV1-13P0DP09 117 aa12.75□□□□□ -0.37
SPIDR-201ENST00000297423 TPPP2P59282 170 aa12.75□□□□□ -0.37
SPIDR-201ENST00000297423 SLC38A11Q08AI6 406 aa12.75□□□□□ -0.37
SPIDR-201ENST00000297423 CISD1Q9NZ45 108 aaKnown RBP12.75□□□□□ -0.37
SPIDR-201ENST00000297423 TRBV24-1A0A075B6N3 115 aa12.75□□□□□ -0.37
SPIDR-201ENST00000297423 A0A1W2PQM1 296 aa12.75□□□□□ -0.37
SPIDR-201ENST00000297423 CLPSP04118 112 aa12.75□□□□□ -0.37
SPIDR-201ENST00000297423 IFI6P09912 130 aa12.75□□□□□ -0.37
SPIDR-201ENST00000297423 EDDM3BP56851 147 aa12.75□□□□□ -0.37
SPIDR-201ENST00000297423 ADPRHL1Q8NDY3 354 aa12.75□□□□□ -0.37
SPIDR-201ENST00000297423 GPR146Q96CH1 333 aa12.75□□□□□ -0.37
SPIDR-201ENST00000297423 DHHO43323 396 aa12.75□□□□□ -0.37
SPIDR-201ENST00000297423 SYNGR2O43760 224 aa12.75□□□□□ -0.37
SPIDR-201ENST00000297423 CRISP2P16562 243 aa12.75□□□□□ -0.37
SPIDR-201ENST00000297423 TCL1AP56279 114 aa12.75□□□□□ -0.37
SPIDR-201ENST00000297423 IGLV3-21P80748 117 aaPredicted RBP12.75□□□□□ -0.37
SPIDR-201ENST00000297423 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.75□□□□□ -0.37
SPIDR-201ENST00000297423 AGBL5Q8NDL9 886 aa12.75□□□□□ -0.37
SPIDR-201ENST00000297423 PSMF1Q92530 271 aa12.75□□□□□ -0.37
SPIDR-201ENST00000297423 ZNF488Q96MN9 340 aa12.75□□□□□ -0.37
SPIDR-201ENST00000297423 GCM1Q9NP62 436 aa12.75□□□□□ -0.37
SPIDR-201ENST00000297423 INTS1Q8N201 2190 aaKnown RBP12.75□□□□□ -0.37
SPIDR-201ENST00000297423 IGHV5-10-1A0A0J9YXX1 117 aa12.74□□□□□ -0.37
SPIDR-201ENST00000297423 H0Y8G0 127 aa12.74□□□□□ -0.37
SPIDR-201ENST00000297423 NDUFB4O95168 129 aa12.74□□□□□ -0.37
SPIDR-201ENST00000297423 GPM6AP51674 278 aa12.74□□□□□ -0.37
SPIDR-201ENST00000297423 ZNF816Q0VGE8 651 aaPredicted RBP12.74□□□□□ -0.37
SPIDR-201ENST00000297423 OR2V1Q8NHB1 315 aa12.74□□□□□ -0.37
SPIDR-201ENST00000297423 YPEL4Q96NS1 127 aa12.74□□□□□ -0.37
SPIDR-201ENST00000297423 OXGR1Q96P68 337 aa12.74□□□□□ -0.37
SPIDR-201ENST00000297423 FAM234AQ9H0X4 552 aa12.74□□□□□ -0.37
SPIDR-201ENST00000297423 IL36RNQ9UBH0 155 aa12.74□□□□□ -0.37
SPIDR-201ENST00000297423 C11orf94C9JXX5 98 aa12.74□□□□□ -0.37
SPIDR-201ENST00000297423 AMTP48728 403 aa12.74□□□□□ -0.37
SPIDR-201ENST00000297423 RHBDD2Q6NTF9 364 aa12.74□□□□□ -0.37
SPIDR-201ENST00000297423 OR4C5Q8NGB2 326 aa12.74□□□□□ -0.37
SPIDR-201ENST00000297423 WNT10AQ9GZT5 417 aa12.74□□□□□ -0.37
SPIDR-201ENST00000297423 LPAR2Q9HBW0 351 aa12.74□□□□□ -0.37
SPIDR-201ENST00000297423 FCN1O00602 326 aa12.74□□□□□ -0.37
SPIDR-201ENST00000297423 NUDT16L1Q9BRJ7 211 aaKnown RBP12.74□□□□□ -0.37
SPIDR-201ENST00000297423 CEP192Q8TEP8 1941 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 DUXBA0A1W2PPF3 345 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 ZNF732B4DXR9 585 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 IL18BPO95998 194 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 COL5A1-AS1Q5SY13 56 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 NUPR1O60356 82 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 IER3P46695 156 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 ACY3Q96HD9 319 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms