RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 MTCH1Q9NZJ7 389 aa5.24□□□□□ -1.57
VCAM1-201ENST00000294728 DSPP15924 2871 aaKnown RBP5.24□□□□□ -1.57
VCAM1-201ENST00000294728 KBTBD11O94819 623 aa5.24□□□□□ -1.57
VCAM1-201ENST00000294728 SCTP09683 121 aa5.24□□□□□ -1.57
VCAM1-201ENST00000294728 B4GALT1P15291 398 aa5.24□□□□□ -1.57
VCAM1-201ENST00000294728 CBR1P16152 277 aa5.24□□□□□ -1.57
VCAM1-201ENST00000294728 FAM3BP58499 235 aaPredicted RBP5.24□□□□□ -1.57
VCAM1-201ENST00000294728 SRSF1Q07955 248 aaKnown RBP eCLIP5.24□□□□□ -1.57
VCAM1-201ENST00000294728 HNF4GQ14541 408 aa5.24□□□□□ -1.57
VCAM1-201ENST00000294728 ZNF674Q2M3X9 581 aa5.24□□□□□ -1.57
VCAM1-201ENST00000294728 PDLIM3Q53GG5 364 aaPredicted RBP5.24□□□□□ -1.57
VCAM1-201ENST00000294728 CLEC9AQ6UXN8 241 aa5.24□□□□□ -1.57
VCAM1-201ENST00000294728 CPEB3Q8NE35 698 aaKnown RBP5.24□□□□□ -1.57
VCAM1-201ENST00000294728 OR10V1Q8NGI7 309 aa5.24□□□□□ -1.57
VCAM1-201ENST00000294728 OR10D3Q8NH80 312 aa5.24□□□□□ -1.57
VCAM1-201ENST00000294728 OR10J5Q8NHC4 309 aa5.24□□□□□ -1.57
VCAM1-201ENST00000294728 AKR7LQ8NHP1 331 aa5.24□□□□□ -1.57
VCAM1-201ENST00000294728 ABHD5Q8WTS1 349 aa5.24□□□□□ -1.57
VCAM1-201ENST00000294728 RAB1CQ92928 201 aa5.24□□□□□ -1.57
VCAM1-201ENST00000294728 PFDN5Q99471 154 aa5.24□□□□□ -1.57
VCAM1-201ENST00000294728 ABHD14AQ9BUJ0 271 aa5.24□□□□□ -1.57
VCAM1-201ENST00000294728 BCL2L14Q9BZR8 327 aa5.24□□□□□ -1.57
VCAM1-201ENST00000294728 PARP12Q9H0J9 701 aaKnown RBP5.24□□□□□ -1.57
VCAM1-201ENST00000294728 RPRMQ9NS64 109 aa5.24□□□□□ -1.57
VCAM1-201ENST00000294728 HSPB7Q9UBY9 170 aa5.24□□□□□ -1.57
VCAM1-201ENST00000294728 SSUH2Q9Y2M2 353 aa5.24□□□□□ -1.57
VCAM1-201ENST00000294728 ANKRD11Q6UB99 2663 aaPredicted RBP5.23□□□□□ -1.57
VCAM1-201ENST00000294728 TRAV9-1A0A075B6T8 112 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 IGHV3-15A0A0B4J1V0 119 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 GGCTO75223 188 aaKnown RBP5.23□□□□□ -1.57
VCAM1-201ENST00000294728 OPN1LWP04000 364 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 TUBG1P23258 451 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 GPX4P36969 197 aaPredicted RBP5.23□□□□□ -1.57
VCAM1-201ENST00000294728 FOLR3P41439 243 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 ERVK11-1P61568 191 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 GNG3P63215 75 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 TGIF1Q15583 401 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 ZNF787Q6DD87 383 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 Q6P435 159 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 ZNF497Q6ZNH5 498 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 OR10A7Q8NGE5 316 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 POM121L2Q96KW2 1035 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 PACRGQ96M98 296 aaPredicted RBP5.23□□□□□ -1.57
VCAM1-201ENST00000294728 C2orf88Q9BSF0 95 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 TUBG2Q9NRH3 451 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 CCL28Q9NRJ3 127 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 UFSP2Q9NUQ7 469 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 LAMP3Q9UQV4 416 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 LAMA1P25391 3075 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 SHANK1Q9Y566 2161 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 J3QT63 122 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 TMPRSS2O15393 492 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 SERPINE2P07093 398 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 TRGC1P0CF51 173 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 HAAOP46952 286 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 NDUFA6P56556 154 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 FOXL2P58012 376 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 DEFA6Q01524 100 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 ZNF154Q13106 437 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 ZNF146Q15072 292 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 ZNF726P1Q15940 193 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 SPIN3Q5JUX0 258 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 NCMAPQ5T1S8 102 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 FGFBP3Q8TAT2 258 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 DYRK2Q92630 601 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 OR51I2Q9H344 312 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 OCIAD1Q9NX40 245 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 BOKQ9UMX3 212 aaPredicted RBP5.23□□□□□ -1.57
VCAM1-201ENST00000294728 CACNA1EQ15878 2313 aa5.23□□□□□ -1.57
VCAM1-201ENST00000294728 TGIF2-C20orf24A0A0A6YYL0 155 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 TRAV24A0A0B4J272 114 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 CTXND1A0A1B0GTU2 59 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 PPP5D1E7EU14 171 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 TSTD3H0UI37 97 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 CYB5BO43169 146 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 YIF1AO95070 293 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 IGKV1-39P01597 117 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 IGKV1D-39P04432 117 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 SOD3P08294 240 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 SSPNQ14714 243 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 TESK1Q15569 626 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 GABRA6Q16445 453 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 ACOT6Q3I5F7 207 aaPredicted RBP5.22□□□□□ -1.57
VCAM1-201ENST00000294728 CISD2Q8N5K1 135 aaKnown RBP5.22□□□□□ -1.57
VCAM1-201ENST00000294728 OR56B2PQ8NGI1 322 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 TMEM170AQ8WVE7 144 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 TAF15Q92804 592 aaKnown RBP eCLIP5.22□□□□□ -1.57
VCAM1-201ENST00000294728 CIB3Q96Q77 187 aaPredicted RBP5.22□□□□□ -1.57
VCAM1-201ENST00000294728 KCNIP1Q9NZI2 227 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 ZNF727A8MUV8 499 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 TRGC2P03986 189 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 FGF7P21781 194 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 CCKARP32238 428 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 UCNP55089 124 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 GNB2P62879 340 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 MEF2BQ02080 365 aaPredicted RBP5.22□□□□□ -1.57
VCAM1-201ENST00000294728 TMEM241Q24JQ0 296 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 ZNF585BQ52M93 769 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 OR2T2Q6IF00 324 aa5.22□□□□□ -1.57
VCAM1-201ENST00000294728 DHRS13Q6UX07 377 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms