RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 DEDDO75618 318 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 CD1AP06126 327 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 COX19Q49B96 90 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 FBXW9Q5XUX1 488 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 SLC36A1Q7Z2H8 476 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 ATG4DQ86TL0 474 aaPredicted RBP9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 NHLRC2Q8NBF2 726 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 LOC102723996A0A087X1L8 192 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 CSN3P07498 182 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 TNFSF10P50591 281 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 P2RY4P51582 365 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 GABRA6Q16445 453 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 C1QL3Q5VWW1 255 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 BTNL3Q6UXE8 466 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 NDUFAF3Q9BU61 184 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 ZNF391Q9UJN7 358 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 BTCP35070 178 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 GLIPR1P48060 266 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 KLF3P57682 345 aaPredicted RBP9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 MTCL1Q9Y4B5 1905 aaKnown RBP9.86□□□□□ -0.83
NPC1L1-201ENST00000289547 ZAR1Q86SH2 424 aa9.86□□□□□ -0.83
NPC1L1-201ENST00000289547 PIP4P1Q86T03 277 aa9.86□□□□□ -0.83
NPC1L1-201ENST00000289547 LSRQ86X29 649 aaPredicted RBP9.86□□□□□ -0.83
NPC1L1-201ENST00000289547 TMEM183AQ8IXX5 376 aa9.86□□□□□ -0.83
NPC1L1-201ENST00000289547 ZDHHC23Q8IYP9 409 aa9.86□□□□□ -0.83
NPC1L1-201ENST00000289547 CENPVL1A0A0U1RR11 272 aa9.86□□□□□ -0.83
NPC1L1-201ENST00000289547 A6NDN8 102 aa9.86□□□□□ -0.83
NPC1L1-201ENST00000289547 UBE2CO00762 179 aa9.86□□□□□ -0.83
NPC1L1-201ENST00000289547 KIR3DL2P43630 455 aa9.86□□□□□ -0.83
NPC1L1-201ENST00000289547 INO80CQ6PI98 192 aaPredicted RBP9.86□□□□□ -0.83
NPC1L1-201ENST00000289547 TMEM252Q8N6L7 170 aa9.86□□□□□ -0.83
NPC1L1-201ENST00000289547 IMMP1LQ96LU5 166 aa9.86□□□□□ -0.83
NPC1L1-201ENST00000289547 COA4Q9NYJ1 87 aa9.86□□□□□ -0.83
NPC1L1-201ENST00000289547 UMODP07911 640 aa9.86□□□□□ -0.83
NPC1L1-201ENST00000289547 SPINK9Q5DT21 86 aa9.86□□□□□ -0.83
NPC1L1-201ENST00000289547 TSEN54Q7Z6J9 526 aaKnown RBP9.86□□□□□ -0.83
NPC1L1-201ENST00000289547 IGKV3D-11A0A0A0MRZ8 115 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 MSGN1A6NI15 193 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 SCGB1C2P0DMR2 95 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 ANKRD55Q3KP44 614 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 BPIFA4PQ86YQ2 179 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 TAAR6Q96RI8 345 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 PPYP01298 95 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 DANCRP0C864 163 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 HTR1DP28221 377 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 VAX1Q5SQQ9 334 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 OR8B12Q8NGG6 310 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 SLC25A28Q96A46 364 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 PRSS27Q9BQR3 290 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 C1orf174Q8IYL3 243 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 WIPI2Q9Y4P8 454 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 COX7A2P2O60397 106 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 PITX3O75364 302 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 IGKV3-11P04433 115 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 SUB1P53999 127 aaKnown RBP eCLIP9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 PRSS12P56730 875 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 PLP1P60201 277 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 RHOBP62745 196 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 SRSF3P84103 164 aaKnown RBP9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 PRDX4Q13162 271 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 LY6DQ14210 128 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 OR13G1Q8NGZ3 307 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 PTX4Q96A99 478 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 SH3BGRL3Q9H299 93 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 SEMA5BQ9P283 1151 aa9.85□□□□□ -0.83
NPC1L1-201ENST00000289547 CTXND1A0A1B0GTU2 59 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 RNF222A6NCQ9 220 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 IFITM10A6NMD0 228 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 PROB1E7EW31 1015 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 RHBDL1O75783 438 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 GAPTQ8N292 157 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 RAB1CQ92928 201 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 S1PR3Q99500 378 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 RSG1Q9BU20 258 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 SLC45A2Q9UMX9 530 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 ZNF260Q3ZCT1 412 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 OR5D13Q8NGL4 314 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 FAM57AQ8TBR7 257 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 ABHD3Q8WU67 409 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 ADAT3Q96EY9 351 aaPredicted RBP9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 GINS3Q9BRX5 216 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 AKIRIN1Q9H9L7 192 aaPredicted RBP9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 ELOVL5Q9NYP7 299 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 ICAM5Q9UMF0 924 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 TRBV5-5A0A0J9YX44 114 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 BPIFB3P59826 476 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 MEF2BQ02080 365 aaPredicted RBP9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 GGTLC2Q14390 218 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 TRAT1Q6PIZ9 186 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 GALMQ96C23 342 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 SOSTQ9BQB4 213 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 TUBD1Q9UJT1 453 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 NUP210Q8TEM1 1887 aaPredicted RBP9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 C4orf51C9J302 202 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 SPRY3O43610 288 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 CTHRC1Q96CG8 243 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 PLPPR2Q96GM1 343 aa9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 HDHD3Q9BSH5 251 aaPredicted RBP9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 RALYQ9UKM9 306 aaKnown RBP9.84□□□□□ -0.83
NPC1L1-201ENST00000289547 A0A0G2JK05 382 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms