RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 DLL1O00548 723 aa3.56□□□□□ -1.84
SCN3A-201ENST00000283254 RBFOX2O43251 390 aaKnown RBP eCLIP3.56□□□□□ -1.84
SCN3A-201ENST00000283254 GGCTO75223 188 aaKnown RBP3.56□□□□□ -1.84
SCN3A-201ENST00000283254 SLC35E3Q7Z769 313 aa3.56□□□□□ -1.84
SCN3A-201ENST00000283254 TMEM37Q8WXS4 190 aa3.56□□□□□ -1.84
SCN3A-201ENST00000283254 NPFFR1Q9GZQ6 430 aa3.56□□□□□ -1.84
SCN3A-201ENST00000283254 CHODLQ9H9P2 273 aa3.56□□□□□ -1.84
SCN3A-201ENST00000283254 DOCK1Q14185 1865 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 ZNF253O75346 499 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 LIPFP07098 398 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 CSN3P07498 182 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 MMP9P14780 707 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 TAS2R60P59551 318 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 ZNF345Q14585 488 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 TEX261Q6UWH6 196 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 SSMEM1Q8WWF3 244 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 C16orf92Q96LL3 132 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 FZR1Q9UM11 496 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 ZNF462Q96JM2 2506 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 TMEM189A5PLL7 270 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 MYOD1P15172 320 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 RPS4XP62701 263 aaKnown RBP3.55□□□□□ -1.84
SCN3A-201ENST00000283254 CCL8P80075 99 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 C1QTNF12Q5T7M4 302 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 LINC01555Q8NAE3 123 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 ZNF738Q8NE65 137 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 PKIBQ9C010 78 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 TUBA4BQ9H853 241 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 SCN7AQ01118 1682 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 TCRBV5S2A0A599 114 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 CBY3A6NI87 242 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 MPV17P39210 176 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 CDX1P47902 265 aaPredicted RBP3.55□□□□□ -1.84
SCN3A-201ENST00000283254 ATP5G2Q06055 141 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 FAM109BQ6ICB4 259 aaPredicted RBP3.55□□□□□ -1.84
SCN3A-201ENST00000283254 SLC35E4Q6ICL7 350 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 TCF24Q7RTU0 167 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 C2CD4CQ8TF44 421 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 SPOCK3Q9BQ16 436 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 PAXXQ9BUH6 204 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 OR2J1Q9GZK6 312 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 AKIP1Q9NQ31 210 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 PLSCR3Q9NRY6 295 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 TMEM30AQ9NV96 361 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 MRPL22Q9NWU5 206 aaKnown RBP3.55□□□□□ -1.84
SCN3A-201ENST00000283254 OTOGLQ3ZCN5 2332 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 A0A1B0GTH9 108 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 H3BMH7 237 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 DRD3P35462 400 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 SELENOPP49908 381 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 WNT3P56703 355 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 TMEM33P57088 247 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 TFF2Q03403 129 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 CEACAM21Q3KPI0 293 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 SP6Q3SY56 376 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 HIKESHIQ53FT3 197 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 WDR25Q64LD2 544 aaPredicted RBP3.55□□□□□ -1.84
SCN3A-201ENST00000283254 LIMS2Q7Z4I7 341 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 CADM3Q8N126 398 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 GAPTQ8N292 157 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 IL22RA2Q969J5 263 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 TMEM186Q96B77 213 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 KCNK7Q9Y2U2 307 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 DSPPQ9NZW4 1301 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 SCN1AP35498 2009 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 ADAP1O75689 374 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 ARG1P05089 322 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 CCL3P10147 92 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 BCL2P10415 239 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 RBM11P57052 281 aaKnown RBP3.55□□□□□ -1.84
SCN3A-201ENST00000283254 ZIC1Q15915 447 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 ADAD2Q8NCV1 583 aaKnown RBP3.55□□□□□ -1.84
SCN3A-201ENST00000283254 ZNF502Q8TBZ5 544 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 NHSQ6T4R5 1651 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 RGPD3A6NKT7 1758 aaPredicted RBP3.55□□□□□ -1.84
SCN3A-201ENST00000283254 RGPD4Q7Z3J3 1758 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 TIAL1Q01085 375 aaKnown RBP eCLIP3.55□□□□□ -1.84
SCN3A-201ENST00000283254 C16orf82Q7Z2V1 217 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 MDP1Q86V88 176 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 H1FOOQ8IZA3 346 aaPredicted RBP3.55□□□□□ -1.84
SCN3A-201ENST00000283254 OR2D3Q8NGH3 330 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 GEMIN7Q9H840 131 aaKnown RBP3.55□□□□□ -1.84
SCN3A-201ENST00000283254 MSL2Q9HCI7 577 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 VAX2Q9UIW0 290 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 HSF4Q9ULV5 492 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 TDRD6O60522 2096 aaKnown RBP3.55□□□□□ -1.84
SCN3A-201ENST00000283254 SEMG1P04279 462 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 CCL4P13236 92 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 PRDX2P32119 198 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 MFAP4P55083 255 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 C10orf128Q5T292 105 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 DCAF12L2Q5VW00 463 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 SGK494Q96LW2 274 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 QTRT1Q9BXR0 403 aaKnown RBP3.55□□□□□ -1.84
SCN3A-201ENST00000283254 ISG20L2Q9H9L3 353 aaKnown RBP3.55□□□□□ -1.84
SCN3A-201ENST00000283254 TNFSF18Q9UNG2 199 aa3.55□□□□□ -1.84
SCN3A-201ENST00000283254 FBLL1A6NHQ2 334 aaKnown RBP3.54□□□□□ -1.84
SCN3A-201ENST00000283254 ZNF729A6NN14 1252 aaPredicted RBP3.54□□□□□ -1.84
SCN3A-201ENST00000283254 TMEM229AB2RXF0 380 aa3.54□□□□□ -1.84
SCN3A-201ENST00000283254 H0Y980 276 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms