RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 PPYP01298 95 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 SSPNQ14714 243 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 RTN4RL1Q86UN2 441 aaPredicted RBP7.67□□□□□ -1.18
NIPBL-201ENST00000282516 PLA2G3Q9NZ20 509 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 RNF7Q9UBF6 113 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 FCGR3AP08637 254 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 NUBP1P53384 320 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 GFRA1P56159 465 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 LAMTOR1Q6IAA8 161 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 DDA1Q9BW61 102 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 FSCN3Q9NQT6 498 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 HCSTQ9UBK5 93 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 TRBV9A0A0B4J1U6 114 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 RECKO95980 971 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 LIPFP07098 398 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 TRGC1P0CF51 173 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 MEF2BQ02080 365 aaPredicted RBP7.67□□□□□ -1.18
NIPBL-201ENST00000282516 PDCD1Q15116 288 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 GUCA2BQ16661 112 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 OR52M1Q8NGK5 317 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 RNF133Q8WVZ7 376 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 LRRC61Q9BV99 259 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 ARRDC1-AS1Q9H2J1 176 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 ARAP2Q8WZ64 1704 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 SIGLEC1Q9BZZ2 1709 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 ANKRD20A5PA0PJZ0 165 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 SLC25A17O43808 307 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 SRD5A2P31213 254 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 C1orf174Q8IYL3 243 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 GPR82Q96P67 336 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 LEPROTL1O95214 131 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 TCF23Q7RTU1 214 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 NKX2-6A6NCS4 301 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 CD300LDQ6UXZ3 194 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 WFDC5Q8TCV5 224 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 PTP4A1Q93096 173 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 SHISA4Q96DD7 197 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 LINC00615Q96LM1 132 aaPredicted RBP7.66□□□□□ -1.18
NIPBL-201ENST00000282516 ZDHHC8Q9ULC8 765 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 TRAV39A0A0B4J263 110 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 TMEM250H0YL14 139 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 H7C1H1 209 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 WNT5AP41221 380 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 FZD5Q13467 585 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 CLPPQ16740 277 aaPredicted RBP7.66□□□□□ -1.18
NIPBL-201ENST00000282516 OR1K1Q8NGR3 316 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 SOSTQ9BQB4 213 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 CXorf51AA0A1B0GTR3 108 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 ANOS1P23352 680 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 OR8B12Q8NGG6 310 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 OR10S1Q8NGN2 331 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 LPAR2Q9HBW0 351 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 NAAAQ02083 359 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 ANKRD34AQ69YU3 496 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 OR8G5Q8NG78 346 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 SLC25A10Q9UBX3 287 aaPredicted RBP7.66□□□□□ -1.18
NIPBL-201ENST00000282516 APELAP0DMC3 54 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 DDTP30046 118 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 PAQR9Q6ZVX9 377 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 OR13C6PQ8NH95 151 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 ZNF418Q8TF45 676 aaPredicted RBP7.66□□□□□ -1.18
NIPBL-201ENST00000282516 CNRIP1Q96F85 164 aaPredicted RBP7.66□□□□□ -1.18
NIPBL-201ENST00000282516 TRBV5-4A0A0C4DH59 114 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 CYB5R3P00387 301 aaPredicted RBP7.66□□□□□ -1.18
NIPBL-201ENST00000282516 FAM106CPP0CH98 169 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 KLF9Q13886 244 aaPredicted RBP7.66□□□□□ -1.18
NIPBL-201ENST00000282516 TEX30Q5JUR7 227 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 ACER2Q5QJU3 275 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 IBA57Q5T440 356 aaKnown RBP7.66□□□□□ -1.18
NIPBL-201ENST00000282516 RCC2Q9P258 522 aaKnown RBP7.66□□□□□ -1.18
NIPBL-201ENST00000282516 A0A1W2PQM1 296 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 CTLA4P16410 223 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 SNRPD3P62318 126 aaKnown RBP7.66□□□□□ -1.18
NIPBL-201ENST00000282516 J3QR06 171 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 EWSR1Q01844 656 aaKnown RBP eCLIP7.66□□□□□ -1.18
NIPBL-201ENST00000282516 ZNF56Q15929 161 aa7.66□□□□□ -1.18
NIPBL-201ENST00000282516 C1QTNF9BB2RNN3 333 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 SHISA8B8ZZ34 492 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 ARF6P62330 175 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 ZNF506Q5JVG8 444 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 MFAP4P55083 255 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 SF3B5Q9BWJ5 86 aaKnown RBP7.65□□□□□ -1.18
NIPBL-201ENST00000282516 DOCK3Q8IZD9 2030 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 OR11H12B2RN74 326 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 ZNF385CQ66K41 422 aaPredicted RBP7.65□□□□□ -1.18
NIPBL-201ENST00000282516 ANKRD37Q7Z713 158 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 OR11H1Q8NG94 326 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 OR11H2Q8NH07 326 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 DLL1O00548 723 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 PPM1DO15297 605 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 SEC11BP0C7V7 166 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 ZNF793Q6ZN11 406 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 OR4D5Q8NGN0 318 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 NPFFO15130 113 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 SLC25A20O43772 301 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 LSM6P62312 80 aaKnown RBP7.65□□□□□ -1.18
NIPBL-201ENST00000282516 ZNF324BQ6AW86 544 aaPredicted RBP7.65□□□□□ -1.18
NIPBL-201ENST00000282516 ZNF414Q96IQ9 312 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 ABHD1Q96SE0 405 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 OR2H1Q9GZK4 316 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms