RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 ZNF695Q8IW36 515 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 FAM173AQ9BQD7 235 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 SLC7A11Q9UPY5 501 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 RNF115Q9Y4L5 304 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 IGKV1-27A0A075B6S5 117 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 ZNF814B7Z6K7 855 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 TUSC2O75896 110 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 PFN1P07737 140 aaKnown RBP8.8□□□□□ -1
UPF3B-201ENST00000276201 NDUFB7P17568 137 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 FUT3P21217 361 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 GNRHRP30968 328 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 MRPS34P82930 218 aaKnown RBP8.8□□□□□ -1
UPF3B-201ENST00000276201 FAM27BQ5VT28 67 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 PRAMEF20Q5VT98 475 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 CARD17Q5XLA6 110 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 TMEM123Q8N131 208 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 OR11L1Q8NGX0 322 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 OR1P1Q8NH06 330 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 LURAP1Q96LR2 239 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 RAB40CQ96S21 281 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 GPR173Q9NS66 373 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 UBE2J1Q9Y385 318 aaPredicted RBP8.8□□□□□ -1
UPF3B-201ENST00000276201 USP9XQ93008 2570 aaPredicted RBP8.8□□□□□ -1
UPF3B-201ENST00000276201 HIVEP3Q5T1R4 2406 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 ZGRF1Q86YA3 2104 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 H0Y980 276 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 TP53I11O14683 189 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 DHHO43323 396 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 IFNA1P01562 189 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 IFNA5P01569 189 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 CTXN2P0C2S0 81 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 GZMBP10144 247 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 FUT6P51993 359 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 PAX9P55771 341 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 CLDN17P56750 224 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 SERF2P84101 59 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 SRSF1Q07955 248 aaKnown RBP eCLIP8.8□□□□□ -1
UPF3B-201ENST00000276201 MPV17LQ2QL34 196 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 MRGPRGQ86SM5 289 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 OR4X1Q8NH49 305 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 JSRP1Q96MG2 331 aaPredicted RBP8.8□□□□□ -1
UPF3B-201ENST00000276201 TTTY12Q9BZ98 90 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 KLRF1Q9NZS2 232 aa8.8□□□□□ -1
UPF3B-201ENST00000276201 LRRK2Q5S007 2527 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 C2orf72A6NCS6 295 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 LRRC3CA6NJW4 275 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 FAM166BA8MTA8 275 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 F5H5K5 113 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 SSSCA1O60232 199 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 AMBPP02760 352 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 EPHA1P21709 976 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 RBM11P57052 281 aaKnown RBP8.79□□□□□ -1
UPF3B-201ENST00000276201 NUTF2P61970 127 aaKnown RBP8.79□□□□□ -1
UPF3B-201ENST00000276201 GFRALQ6UXV0 394 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 TBC1D26Q86UD7 250 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 DMRTC2Q8IXT2 367 aaPredicted RBP8.79□□□□□ -1
UPF3B-201ENST00000276201 BORCS8Q96FH0 119 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 CABLES2Q9BTV7 478 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 NAT8Q9UHE5 227 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 URGCP-MRPS24S4R325 110 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 A0A1B0GV50 99 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 A0A1B0GWJ7 208 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 SHISA8B8ZZ34 492 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 NPIPA2E9PIF3 369 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 TMEM50AO95807 157 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 TK1P04183 234 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 TYMSP04818 313 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 CST2P09228 141 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 PGA5P0DJD9 388 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 CCKARP32238 428 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 CLDN15P56746 228 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 PLGLB1Q02325 96 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 CYP2G1PQ6ZSU1 146 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 SAXO1Q8IYX7 474 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 PRR7Q8TB68 274 aa8.79□□□□□ -1
UPF3B-201ENST00000276201 PINX1Q96BK5 328 aaKnown RBP8.79□□□□□ -1
UPF3B-201ENST00000276201 IGKV1-12A0A0C4DH73 117 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 A0A1W2PNR3 127 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 ADAM20O43506 726 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 SYNGR3O43761 229 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 IGKV1D-12P01611 117 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 KRTCAP3Q53RY4 240 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 CXorf66Q5JRM2 361 aaPredicted RBP8.78□□□□□ -1
UPF3B-201ENST00000276201 WDR25Q64LD2 544 aaPredicted RBP8.78□□□□□ -1
UPF3B-201ENST00000276201 MEX3BQ6ZN04 569 aaKnown RBP8.78□□□□□ -1
UPF3B-201ENST00000276201 Q6ZPA2 131 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 C20orf196Q8IYI0 205 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 TMEM251Q8N6I4 163 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 TMEM170AQ8WVE7 144 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 MISP3Q96FF7 219 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 MRPL37Q9BZE1 423 aaKnown RBP8.78□□□□□ -1
UPF3B-201ENST00000276201 ZDHHC11Q9H8X9 412 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 TIMM9Q9Y5J7 89 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 RFNGQ9Y644 331 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 TRBV6-6A0A0A6YYG2 114 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 LRP5LA4QPB2 252 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 OR6C6A6NF89 314 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 KIAA1324LA8MWY0 1029 aaPredicted RBP8.78□□□□□ -1
UPF3B-201ENST00000276201 PPP5D1E7EU14 171 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 ZNHIT1O43257 154 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms