RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 TMEM272A0A1B0GTI8 110 aa11.4□□□□□ -0.58
HMGN3-201ENST00000275036 YPEL1O60688 119 aa11.4□□□□□ -0.58
HMGN3-201ENST00000275036 VEGFCP49767 419 aa11.4□□□□□ -0.58
HMGN3-201ENST00000275036 SPARTQ8N0X7 666 aa11.4□□□□□ -0.58
HMGN3-201ENST00000275036 Q8N9W7 124 aa11.4□□□□□ -0.58
HMGN3-201ENST00000275036 OR2T10Q8NGZ9 312 aa11.4□□□□□ -0.58
HMGN3-201ENST00000275036 GALMQ96C23 342 aa11.4□□□□□ -0.58
HMGN3-201ENST00000275036 YPEL2Q96QA6 119 aa11.4□□□□□ -0.58
HMGN3-201ENST00000275036 URM1Q9BTM9 101 aaKnown RBP11.4□□□□□ -0.58
HMGN3-201ENST00000275036 LINC00527Q9UJ94 153 aa11.4□□□□□ -0.58
HMGN3-201ENST00000275036 TRBV6-6A0A0A6YYG2 114 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 TRAV1-2A0A0B4J238 106 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 TRDV1A0A1B0GX56 115 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 TCRBV4S1A1TA0A5B7 111 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 NCBP2LA6PVI3 153 aaKnown RBP11.39□□□□□ -0.59
HMGN3-201ENST00000275036 TXNL1O43396 289 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 LANCL1O43813 399 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 MOSP00540 346 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 IGHG2P01859 326 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 OR3A3P47888 321 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 F2RL1P55085 397 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 LSAMPQ13449 338 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 PLAC9Q5JTB6 97 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 LY6G6FQ5SQ64 297 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 UBE2UQ5VVX9 321 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 ZNF329Q86UD4 541 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 NR2C2APQ86WQ0 139 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 OR4F17Q8NGA8 305 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 SETD6Q8TBK2 473 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 IL1F10Q8WWZ1 152 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 ARHGAP5-AS1Q96IT6 56 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 OR4F4Q96R69 305 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 PECRQ9BY49 303 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 PARP12Q9H0J9 701 aaKnown RBP11.39□□□□□ -0.59
HMGN3-201ENST00000275036 IFI27L2Q9H2X8 130 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 CHMP1AQ9HD42 196 aaPredicted RBP11.39□□□□□ -0.59
HMGN3-201ENST00000275036 STEAP1Q9UHE8 339 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 HSF4Q9ULV5 492 aa11.39□□□□□ -0.59
HMGN3-201ENST00000275036 TSSC4Q9Y5U2 329 aaPredicted RBP11.39□□□□□ -0.59
HMGN3-201ENST00000275036 PSMB11A5LHX3 300 aa11.38□□□□□ -0.59
HMGN3-201ENST00000275036 MRPS14O60783 128 aaKnown RBP11.38□□□□□ -0.59
HMGN3-201ENST00000275036 C22orf42Q6IC83 251 aa11.38□□□□□ -0.59
HMGN3-201ENST00000275036 SLC35E3Q7Z769 313 aa11.38□□□□□ -0.59
HMGN3-201ENST00000275036 OR4X2Q8NGF9 303 aa11.38□□□□□ -0.59
HMGN3-201ENST00000275036 RITA1Q96K30 269 aa11.38□□□□□ -0.59
HMGN3-201ENST00000275036 S1PR3Q99500 378 aa11.38□□□□□ -0.59
HMGN3-201ENST00000275036 MRPL20Q9BYC9 149 aaKnown RBP11.38□□□□□ -0.59
HMGN3-201ENST00000275036 ABCG5Q9H222 651 aa11.38□□□□□ -0.59
HMGN3-201ENST00000275036 LIN7CQ9NUP9 197 aaKnown RBP11.38□□□□□ -0.59
HMGN3-201ENST00000275036 LRRC42Q9Y546 428 aa11.38□□□□□ -0.59
HMGN3-201ENST00000275036 SAA2-SAA4A0A096LPE2 208 aa11.37□□□□□ -0.59
HMGN3-201ENST00000275036 A0A0B4J203 849 aa11.37□□□□□ -0.59
HMGN3-201ENST00000275036 IFITM5A6NNB3 132 aa11.37□□□□□ -0.59
HMGN3-201ENST00000275036 SERPINE3A8MV23 424 aa11.37□□□□□ -0.59
HMGN3-201ENST00000275036 ST8SIA5O15466 376 aa11.37□□□□□ -0.59
HMGN3-201ENST00000275036 SAA2P0DJI9 122 aaPredicted RBP11.37□□□□□ -0.59
HMGN3-201ENST00000275036 GPR12P47775 334 aa11.37□□□□□ -0.59
HMGN3-201ENST00000275036 MOGAT2Q3SYC2 334 aa11.37□□□□□ -0.59
HMGN3-201ENST00000275036 ZNF833PQ6ZTB9 187 aa11.37□□□□□ -0.59
HMGN3-201ENST00000275036 MOB1BQ7L9L4 216 aa11.37□□□□□ -0.59
HMGN3-201ENST00000275036 FAM71E2Q8N5Q1 922 aa11.37□□□□□ -0.59
HMGN3-201ENST00000275036 WFDC9Q8NEX5 89 aa11.37□□□□□ -0.59
HMGN3-201ENST00000275036 PHF21AQ96BD5 680 aa11.37□□□□□ -0.59
HMGN3-201ENST00000275036 NABP2Q9BQ15 211 aa11.37□□□□□ -0.59
HMGN3-201ENST00000275036 HSPB9Q9BQS6 159 aa11.37□□□□□ -0.59
HMGN3-201ENST00000275036 ZNF251Q9BRH9 671 aa11.37□□□□□ -0.59
HMGN3-201ENST00000275036 Q9N2K0 584 aa11.37□□□□□ -0.59
HMGN3-201ENST00000275036 ABRACLQ9P1F3 81 aa11.37□□□□□ -0.59
HMGN3-201ENST00000275036 OR1A1Q9P1Q5 309 aa11.37□□□□□ -0.59
HMGN3-201ENST00000275036 KCNK7Q9Y2U2 307 aa11.37□□□□□ -0.59
HMGN3-201ENST00000275036 SMIM30A4D0T7 59 aa11.36□□□□□ -0.59
HMGN3-201ENST00000275036 PDCD5O14737 125 aa11.36□□□□□ -0.59
HMGN3-201ENST00000275036 RGS11O94810 467 aa11.36□□□□□ -0.59
HMGN3-201ENST00000275036 SCTP09683 121 aa11.36□□□□□ -0.59
HMGN3-201ENST00000275036 IGLL1P15814 213 aa11.36□□□□□ -0.59
HMGN3-201ENST00000275036 RAB3BP20337 219 aa11.36□□□□□ -0.59
HMGN3-201ENST00000275036 GALP22466 123 aa11.36□□□□□ -0.59
HMGN3-201ENST00000275036 CNTFRP26992 372 aa11.36□□□□□ -0.59
HMGN3-201ENST00000275036 PSMB9P28065 219 aa11.36□□□□□ -0.59
HMGN3-201ENST00000275036 PSMD7P51665 324 aa11.36□□□□□ -0.59
HMGN3-201ENST00000275036 HLA-DRB3P79483 266 aa11.36□□□□□ -0.59
HMGN3-201ENST00000275036 KHDC1LQ5JSQ8 128 aa11.36□□□□□ -0.59
HMGN3-201ENST00000275036 LCE2DQ5TA82 110 aaPredicted RBP11.36□□□□□ -0.59
HMGN3-201ENST00000275036 C18orf65Q6ZTR6 163 aa11.36□□□□□ -0.59
HMGN3-201ENST00000275036 STPG2Q8N412 459 aa11.36□□□□□ -0.59
HMGN3-201ENST00000275036 OR2AK2Q8NG84 335 aa11.36□□□□□ -0.59
HMGN3-201ENST00000275036 OR56B1Q8NGI3 324 aa11.36□□□□□ -0.59
HMGN3-201ENST00000275036 CHPT1Q8WUD6 406 aa11.36□□□□□ -0.59
HMGN3-201ENST00000275036 YTHDF1Q9BYJ9 559 aaKnown RBP11.36□□□□□ -0.59
HMGN3-201ENST00000275036 RIMS4Q9H426 269 aaPredicted RBP11.36□□□□□ -0.59
HMGN3-201ENST00000275036 Q9H521 79 aa11.36□□□□□ -0.59
HMGN3-201ENST00000275036 RAB22AQ9UL26 194 aa11.36□□□□□ -0.59
HMGN3-201ENST00000275036 IGKV1-6A0A0C4DH72 117 aa11.35□□□□□ -0.59
HMGN3-201ENST00000275036 MYL9P24844 172 aa11.35□□□□□ -0.59
HMGN3-201ENST00000275036 RPL39P5Q59GN2 51 aa11.35□□□□□ -0.59
HMGN3-201ENST00000275036 ETV3LQ6ZN32 361 aa11.35□□□□□ -0.59
HMGN3-201ENST00000275036 ABHD14BQ96IU4 210 aa11.35□□□□□ -0.59
HMGN3-201ENST00000275036 CMSS1Q9BQ75 279 aaKnown RBP11.35□□□□□ -0.59
HMGN3-201ENST00000275036 AGMATQ9BSE5 352 aa11.35□□□□□ -0.59
HMGN3-201ENST00000275036 C12orf4Q9NQ89 552 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms