RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 LANCL1O43813 399 aa7.64□□□□□ -1.19
VPS41-201ENST00000265745 PDCD6O75340 191 aa7.64□□□□□ -1.19
VPS41-201ENST00000265745 CD37P11049 281 aa7.64□□□□□ -1.19
VPS41-201ENST00000265745 HOXD3P31249 432 aaPredicted RBP7.64□□□□□ -1.19
VPS41-201ENST00000265745 MYCNOSP40205 109 aa7.64□□□□□ -1.19
VPS41-201ENST00000265745 F2RL1P55085 397 aa7.64□□□□□ -1.19
VPS41-201ENST00000265745 GPR50Q13585 617 aa7.64□□□□□ -1.19
VPS41-201ENST00000265745 MORN2Q502X0 79 aa7.64□□□□□ -1.19
VPS41-201ENST00000265745 ACSM3Q53FZ2 586 aa7.64□□□□□ -1.19
VPS41-201ENST00000265745 C6orf141Q5SZD1 244 aa7.64□□□□□ -1.19
VPS41-201ENST00000265745 C5orf24Q7Z6I8 188 aa7.64□□□□□ -1.19
VPS41-201ENST00000265745 ZNF695Q8IW36 515 aa7.64□□□□□ -1.19
VPS41-201ENST00000265745 FAM71E2Q8N5Q1 922 aa7.64□□□□□ -1.19
VPS41-201ENST00000265745 MS4A15Q8N5U1 240 aa7.64□□□□□ -1.19
VPS41-201ENST00000265745 FAM46BQ96A09 425 aa7.64□□□□□ -1.19
VPS41-201ENST00000265745 GON7Q9BXV9 100 aa7.64□□□□□ -1.19
VPS41-201ENST00000265745 KCNIP1Q9NZI2 227 aa7.64□□□□□ -1.19
VPS41-201ENST00000265745 WI2-2373I1.2A0A1W2PRP0 233 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 NUDT19A8MXV4 375 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 PTGES3LE9PB15 166 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 CDK1P06493 297 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 ELANEP08246 267 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 UBBP0CG47 229 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 LORP23490 312 aaPredicted RBP7.63□□□□□ -1.19
VPS41-201ENST00000265745 SOX6P35712 828 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 HTD2P86397 168 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 CFHR3Q02985 330 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 FOXE3Q13461 319 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 SPHARQ15513 63 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 C1orf100Q5SVJ3 147 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 FAM27D1Q5T7N8 215 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 OR10K2Q6IF99 312 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 LRRTM1Q86UE6 522 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 ODF3L1Q8IXM7 274 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 RNF152Q8N8N0 203 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 KLHL30-AS1Q8NEE0 82 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 OR52L2PQ8NGH6 319 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 MRPL30Q8TCC3 161 aaKnown RBP7.63□□□□□ -1.19
VPS41-201ENST00000265745 PHYHIPQ92561 330 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 NEDD4LQ96PU5 975 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 RASL11BQ9BPW5 248 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 HSPB9Q9BQS6 159 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 MCRIP2Q9BUT9 160 aaKnown RBP7.63□□□□□ -1.19
VPS41-201ENST00000265745 SSBP4Q9BWG4 385 aaPredicted RBP7.63□□□□□ -1.19
VPS41-201ENST00000265745 MND1Q9BWT6 205 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 GPR61Q9BZJ8 451 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 CST11Q9H112 138 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 DCLRE1BQ9H816 532 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 FBXL7Q9UJT9 491 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 JPT1Q9UK76 154 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 LSM2Q9Y333 95 aaKnown RBP7.63□□□□□ -1.19
VPS41-201ENST00000265745 LRRC42Q9Y546 428 aa7.63□□□□□ -1.19
VPS41-201ENST00000265745 CCL24O00175 119 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 YPEL1O60688 119 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 IGHG4P01861 327 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 IGF1P05019 195 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 SRMP19623 302 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 CHATP28329 748 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 HTR2CP28335 458 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 PPP1CCP36873 323 aaKnown RBP7.62□□□□□ -1.19
VPS41-201ENST00000265745 CDX1P47902 265 aaPredicted RBP7.62□□□□□ -1.19
VPS41-201ENST00000265745 RPS27AP62979 156 aaKnown RBP7.62□□□□□ -1.19
VPS41-201ENST00000265745 QRFPP83859 136 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 GABPB1Q06547 395 aaPredicted RBP7.62□□□□□ -1.19
VPS41-201ENST00000265745 LSAMPQ13449 338 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 GNMTQ14749 295 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 KIR2DS1Q14954 304 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 DEFB121Q5J5C9 76 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 CXorf66Q5JRM2 361 aaPredicted RBP7.62□□□□□ -1.19
VPS41-201ENST00000265745 NKAPLQ5M9Q1 402 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 LY6G6FQ5SQ64 297 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 GLT8D1Q68CQ7 371 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 LCNL1Q6ZST4 164 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 C6orf201Q7Z4U5 140 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 CEACAM19Q7Z692 300 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 KCNG3Q8TAE7 436 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 RAX2Q96IS3 184 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 RITA1Q96K30 269 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 DUX3Q96PT4 197 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 YPEL2Q96QA6 119 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 SULT4A1Q9BR01 284 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 FAAP24Q9BTP7 215 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 ABHD14AQ9BUJ0 271 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 TMED9Q9BVK6 235 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 VCXQ9H320 206 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 DNAH3Q8TD57 4116 aa7.62□□□□□ -1.19
VPS41-201ENST00000265745 ANKRD65E5RJM6 399 aa7.61□□□□□ -1.19
VPS41-201ENST00000265745 H3BS24 57 aa7.61□□□□□ -1.19
VPS41-201ENST00000265745 SLC22A1O15245 554 aa7.61□□□□□ -1.19
VPS41-201ENST00000265745 RRP9O43818 475 aaKnown RBP7.61□□□□□ -1.19
VPS41-201ENST00000265745 RGS11O94810 467 aa7.61□□□□□ -1.19
VPS41-201ENST00000265745 NAPSAO96009 420 aa7.61□□□□□ -1.19
VPS41-201ENST00000265745 UCHL1P09936 223 aa7.61□□□□□ -1.19
VPS41-201ENST00000265745 UNC119Q13432 240 aa7.61□□□□□ -1.19
VPS41-201ENST00000265745 IRF3Q14653 427 aa7.61□□□□□ -1.19
VPS41-201ENST00000265745 MMDQ15546 238 aa7.61□□□□□ -1.19
VPS41-201ENST00000265745 HMGN3Q15651 99 aa7.61□□□□□ -1.19
VPS41-201ENST00000265745 ZNF833PQ6ZTB9 187 aa7.61□□□□□ -1.19
VPS41-201ENST00000265745 DPF1Q92782 380 aa7.61□□□□□ -1.19
VPS41-201ENST00000265745 GALMQ96C23 342 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms