RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 OR2G3Q8NGZ4 309 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 MRPL37Q9BZE1 423 aaKnown RBP9.34□□□□□ -0.91
MSH3-201ENST00000265081 SRRM5B3KS81 715 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 DFFBO76075 338 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 CEACAM6P40199 344 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 GATA4P43694 442 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 CAMLGP49069 296 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 MZT1Q08AG7 82 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 ZNF610Q8N9Z0 462 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 GAB2Q9UQC2 676 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 PRELID3BQ9Y3B1 194 aa9.34□□□□□ -0.91
MSH3-201ENST00000265081 FAM90A9PA6NNJ1 464 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 PMS2P5A8MQ11 134 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 NUPL2O15504 423 aaKnown RBP9.33□□□□□ -0.92
MSH3-201ENST00000265081 CEACAM8P31997 349 aaPredicted RBP9.33□□□□□ -0.92
MSH3-201ENST00000265081 CD177Q8N6Q3 437 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 ZNF525Q8N782 197 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 PROCRQ9UNN8 238 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 DNAJC13O75165 2243 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 ITGB1BP1O14713 200 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 WNT9BO14905 357 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 SYNGR2O43760 224 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 C1QL1O75973 258 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 PPP1CCP36873 323 aaKnown RBP9.33□□□□□ -0.92
MSH3-201ENST00000265081 RNF212Q495C1 297 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 ZNF506Q5JVG8 444 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 TIMM23BQ5SRD1 257 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 TMEM182Q6ZP80 229 aaPredicted RBP9.33□□□□□ -0.92
MSH3-201ENST00000265081 SLC35B3Q9H1N7 401 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 ATP6V1G2-DDX39BF2Z307 99 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 CGB3P0DN86 165 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 CGB7P0DN87 165 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 ZNF718Q3SXZ3 478 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 ZNF66Q6ZN08 573 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 OR1L1Q8NH94 360 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 MBD3L1Q8WWY6 194 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 GALMQ96C23 342 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 MAGT1Q9H0U3 335 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 TIMM9Q9Y5J7 89 aa9.33□□□□□ -0.92
MSH3-201ENST00000265081 HBZP02008 142 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 SERPINE2P07093 398 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 SPINK2P20155 84 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 VAMP2P63027 116 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 RHEBQ15382 184 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 LRRC75BQ2VPJ9 315 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 HSD17B11Q8NBQ5 300 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 MALSU1Q96EH3 234 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 PBDC1Q9BVG4 233 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 OPN3Q9H1Y3 402 aaPredicted RBP9.32□□□□□ -0.92
MSH3-201ENST00000265081 CFAP47Q6ZTR5 3102 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 NBL1P41271 181 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 CEBPDP49716 269 aaPredicted RBP9.32□□□□□ -0.92
MSH3-201ENST00000265081 RPL23AP62750 156 aaKnown RBP9.32□□□□□ -0.92
MSH3-201ENST00000265081 ARL16Q0P5N6 197 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 SMIM21Q3B7S5 101 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 ZNF474Q6S9Z5 364 aaPredicted RBP9.32□□□□□ -0.92
MSH3-201ENST00000265081 OR51H1Q8NH63 302 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 LINC00574Q9H8X3 128 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 CACNG5Q9UF02 275 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 RFNGQ9Y644 331 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 F2RL2O00254 374 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 HSPA12AO43301 675 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 NFYBP25208 207 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 RPL30P62888 115 aaKnown RBP9.32□□□□□ -0.92
MSH3-201ENST00000265081 PRSS33Q8NF86 280 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 DSCAML1Q8TD84 2053 aa9.32□□□□□ -0.92
MSH3-201ENST00000265081 HSPB1P04792 205 aaKnown RBP9.31□□□□□ -0.92
MSH3-201ENST00000265081 CCL20P78556 96 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 DEFB109BQ30KR1 87 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 TMEM88Q6PEY1 159 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 FGFRL1Q8N441 504 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 ZADH2Q8N4Q0 377 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 CNEP1R1Q8N9A8 125 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 CLDND2Q8NHS1 167 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 ABHD14AQ9BUJ0 271 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 METRNQ9UJH8 293 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 RAI1Q7Z5J4 1906 aaPredicted RBP9.31□□□□□ -0.92
MSH3-201ENST00000265081 IGKV1D-17A0A075B6S4 117 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 GRPP07492 148 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 HOXC12P31275 282 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 ICAM4Q14773 271 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 ZNF826PQ6ZT77 177 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 RBMXL3Q8N7X1 1067 aaKnown RBP9.31□□□□□ -0.92
MSH3-201ENST00000265081 RBMXL1Q96E39 390 aaKnown RBP9.31□□□□□ -0.92
MSH3-201ENST00000265081 TRAV39A0A0B4J263 110 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 ADH4P08319 380 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 COL10A1Q03692 680 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 STX12Q86Y82 276 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 RXFP4Q8TDU9 374 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 SMCO4Q9NRQ5 59 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 KCNIP1Q9NZI2 227 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 TANC2Q9HCD6 1990 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 RBFOX3A6NFN3 312 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 RAB29O14966 203 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 CLDN14O95500 239 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 ASCL1P50553 236 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 TNFRSF9Q07011 255 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 CLINT1Q14677 625 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 PRAMEF6Q5VXH4 476 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 IL1F10Q8WWZ1 152 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms