RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 ERGIC1Q969X5 290 aa7.83□□□□□ -1.16
SSR3-201ENST00000265044 OR2A7Q96R45 310 aa7.83□□□□□ -1.16
SSR3-201ENST00000265044 RCC2Q9P258 522 aaKnown RBP7.83□□□□□ -1.16
SSR3-201ENST00000265044 PTPN13Q12923 2485 aa7.83□□□□□ -1.16
SSR3-201ENST00000265044 A0A1B0GV50 99 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 ENSAO43768 121 aaKnown RBP7.82□□□□□ -1.16
SSR3-201ENST00000265044 ARHGDIBP52566 201 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 NKX6-1P78426 367 aaPredicted RBP7.82□□□□□ -1.16
SSR3-201ENST00000265044 SHEQ5VZ18 495 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 LILRB2Q8N423 598 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 MRGPRFQ96AM1 343 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 TP53RKQ96S44 253 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 PIPOXQ9P0Z9 390 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 ZNF835Q9Y2P0 537 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 ERVH48-1M5A8F1 160 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 PGLYRP1O75594 196 aaPredicted RBP7.82□□□□□ -1.16
SSR3-201ENST00000265044 ADH4P08319 380 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 IAPPP10997 89 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 VDAC1P21796 283 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 PRAMEF5Q5TYX0 476 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 TEX261Q6UWH6 196 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 CLEC9AQ6UXN8 241 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 HSD17B11Q8NBQ5 300 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 RAB1CQ92928 201 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 DCAF16Q9NXF7 216 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 U3KQ87 197 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 DOCK11Q5JSL3 2073 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 HMSDA8MTL9 139 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 E7EQL1 145 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 ACTL6BO94805 426 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 MUC1P15941 1255 aaPredicted RBP7.82□□□□□ -1.16
SSR3-201ENST00000265044 P2RX3P56373 397 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 POLR2GP62487 172 aaKnown RBP eCLIP7.82□□□□□ -1.16
SSR3-201ENST00000265044 MSMPQ1L6U9 139 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 FAM90A1Q86YD7 464 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 CD177Q8N6Q3 437 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 NUP37Q8NFH4 326 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 SCGB1C1Q8TD33 95 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 NMES1Q9C002 83 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 SLC25A31Q9H0C2 315 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 TAS2R3Q9NYW6 316 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 CALYQ9NYX4 217 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 CACNG5Q9UF02 275 aa7.82□□□□□ -1.16
SSR3-201ENST00000265044 hCG_1809904A0A1W2PP81 198 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 A0A1W2PPE2 198 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 A0A1W2PR64 198 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 A0A1W2PRV1 198 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 SMCO3A2RU48 225 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 FOXI3A8MTJ6 420 aaPredicted RBP7.81□□□□□ -1.16
SSR3-201ENST00000265044 E5RGE8 158 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 GPR137BO60478 399 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 IFNA5P01569 189 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 CXCL2P19875 107 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 UQCRFS1P47985 274 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 UCP3P55916 312 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 ZNF616Q08AN1 781 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 FAM74A1Q5RGS3 127 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 NCMAPQ5T1S8 102 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 OR4A16Q8NH70 328 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 GLYATL2Q8WU03 294 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 GSX2Q9BZM3 304 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 GAL3ST2Q9H3Q3 398 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 RCL1Q9Y2P8 373 aaKnown RBP7.81□□□□□ -1.16
SSR3-201ENST00000265044 NSG2Q9Y328 171 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 LRRK2Q5S007 2527 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 CST7O76096 145 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 THBDP07204 575 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 ERVK11-1P61568 191 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 UBA52P62987 128 aaKnown RBP7.81□□□□□ -1.16
SSR3-201ENST00000265044 IZUMO4Q1ZYL8 232 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 SPANXN5Q5MJ07 72 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 PRSS54Q6PEW0 395 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 ZNF561Q8N587 486 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 AKR1E2Q96JD6 320 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 TMEM222Q9H0R3 208 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 TRBV6-7A0A0A0MS04 114 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 MECP2P51608 486 aaKnown RBP7.81□□□□□ -1.16
SSR3-201ENST00000265044 SUPT4H1P63272 117 aaKnown RBP7.81□□□□□ -1.16
SSR3-201ENST00000265044 MRPS11P82912 194 aaKnown RBP7.81□□□□□ -1.16
SSR3-201ENST00000265044 TAGLNQ01995 201 aaKnown RBP7.81□□□□□ -1.16
SSR3-201ENST00000265044 LY6G6FQ5SQ64 297 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 TMED6Q8WW62 240 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 DMRTA2Q96SC8 542 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 LIME1Q9H400 295 aa7.81□□□□□ -1.16
SSR3-201ENST00000265044 IGLV3-9A0A075B6K5 115 aa7.8□□□□□ -1.16
SSR3-201ENST00000265044 IGKV1D-17A0A075B6S4 117 aa7.8□□□□□ -1.16
SSR3-201ENST00000265044 A0A1W2PPH5 198 aa7.8□□□□□ -1.16
SSR3-201ENST00000265044 TMEM8BA6NDV4 472 aa7.8□□□□□ -1.16
SSR3-201ENST00000265044 TMEM187Q14656 261 aa7.8□□□□□ -1.16
SSR3-201ENST00000265044 SPRNQ5BIV9 151 aa7.8□□□□□ -1.16
SSR3-201ENST00000265044 OR8G2PQ6IF36 304 aa7.8□□□□□ -1.16
SSR3-201ENST00000265044 DRAM1Q8N682 238 aa7.8□□□□□ -1.16
SSR3-201ENST00000265044 CNTNAP3Q9BZ76 1288 aa7.8□□□□□ -1.16
SSR3-201ENST00000265044 PARP12Q9H0J9 701 aaKnown RBP7.8□□□□□ -1.16
SSR3-201ENST00000265044 CLN8Q9UBY8 286 aa7.8□□□□□ -1.16
SSR3-201ENST00000265044 IFITM2Q01629 132 aa7.8□□□□□ -1.16
SSR3-201ENST00000265044 HERPUD1Q15011 391 aa7.8□□□□□ -1.16
SSR3-201ENST00000265044 H1FOOQ8IZA3 346 aaPredicted RBP7.8□□□□□ -1.16
SSR3-201ENST00000265044 C14orf79Q96F83 325 aa7.8□□□□□ -1.16
SSR3-201ENST00000265044 OR5AC2Q9NZP5 309 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms