RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 CEACAM1P13688 526 aa13.04□□□□□ -0.32
CASC3-201ENST00000264645 ZNF818PQ6ZRF7 136 aa13.04□□□□□ -0.32
CASC3-201ENST00000264645 RAB9BQ9NP90 201 aa13.04□□□□□ -0.32
CASC3-201ENST00000264645 SSUH2Q9Y2M2 353 aa13.04□□□□□ -0.32
CASC3-201ENST00000264645 PTPRDP23468 1912 aa13.04□□□□□ -0.32
CASC3-201ENST00000264645 WNT10AQ9GZT5 417 aa13.04□□□□□ -0.32
CASC3-201ENST00000264645 BRCA1P38398 1863 aaKnown RBP13.04□□□□□ -0.32
CASC3-201ENST00000264645 TSPAN2O60636 221 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 PSG5Q15238 335 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 FAM166AQ6J272 317 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 CDPF1Q6NVV7 123 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 EDARADDQ8WWZ3 215 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 ZNF488Q96MN9 340 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 SCN10AQ9Y5Y9 1956 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 TRAV38-1A0A0B4J264 116 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 TGFBR3LH3BV60 316 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 OR4A8P0C604 315 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 MPZP25189 248 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 NUBP1P53384 320 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 WIPI1Q5MNZ9 446 aaPredicted RBP13.03□□□□□ -0.32
CASC3-201ENST00000264645 A0A0A6YYD4 124 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 HELTA6NFD8 242 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 TMEM250H0YL14 139 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 SRSF10O75494 262 aaKnown RBP13.03□□□□□ -0.32
CASC3-201ENST00000264645 PGLYRP1O75594 196 aaPredicted RBP13.03□□□□□ -0.32
CASC3-201ENST00000264645 PMELP40967 661 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 XIRP1Q702N8 1843 aaKnown RBP13.03□□□□□ -0.32
CASC3-201ENST00000264645 PHF3Q92576 2039 aaKnown RBP13.03□□□□□ -0.32
CASC3-201ENST00000264645 H0Y980 276 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 HOXC4P09017 264 aaPredicted RBP13.03□□□□□ -0.32
CASC3-201ENST00000264645 SNAI3Q3KNW1 292 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 CDCP2Q5VXM1 449 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 ASPHD2Q6ICH7 369 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 ERASQ7Z444 233 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 CDCA3Q99618 268 aaPredicted RBP13.03□□□□□ -0.32
CASC3-201ENST00000264645 TMEM191AQ9H0A3 160 aa13.03□□□□□ -0.32
CASC3-201ENST00000264645 FBLL1A6NHQ2 334 aaKnown RBP13.02□□□□□ -0.32
CASC3-201ENST00000264645 CYB561P49447 251 aa13.02□□□□□ -0.32
CASC3-201ENST00000264645 DSCR4P56555 118 aaPredicted RBP13.02□□□□□ -0.32
CASC3-201ENST00000264645 TBC1D28Q2M2D7 210 aa13.02□□□□□ -0.32
CASC3-201ENST00000264645 LINC00696Q6ZRV3 163 aa13.02□□□□□ -0.32
CASC3-201ENST00000264645 ADIPOR1Q96A54 375 aa13.02□□□□□ -0.32
CASC3-201ENST00000264645 ABHD14BQ96IU4 210 aa13.02□□□□□ -0.32
CASC3-201ENST00000264645 GZMBP10144 247 aa13.02□□□□□ -0.33
CASC3-201ENST00000264645 CD33P20138 364 aa13.02□□□□□ -0.33
CASC3-201ENST00000264645 PLGLAQ15195 96 aa13.02□□□□□ -0.33
CASC3-201ENST00000264645 GABRA6Q16445 453 aa13.02□□□□□ -0.33
CASC3-201ENST00000264645 TMEM92Q6UXU6 159 aa13.02□□□□□ -0.33
CASC3-201ENST00000264645 RABEPKQ7Z6M1 372 aa13.02□□□□□ -0.33
CASC3-201ENST00000264645 MIEN1Q9BRT3 115 aa13.02□□□□□ -0.33
CASC3-201ENST00000264645 SLC45A2Q9UMX9 530 aa13.02□□□□□ -0.33
CASC3-201ENST00000264645 ZNF835Q9Y2P0 537 aa13.02□□□□□ -0.33
CASC3-201ENST00000264645 R4GN57 208 aa13.02□□□□□ -0.33
CASC3-201ENST00000264645 KIAA2026Q5HYC2 2103 aa13.02□□□□□ -0.33
CASC3-201ENST00000264645 AKAP6Q13023 2319 aa13.02□□□□□ -0.33
CASC3-201ENST00000264645 SERTM2A0A1B0GWG4 89 aa13.02□□□□□ -0.33
CASC3-201ENST00000264645 LMO7DNF2Z398 122 aa13.02□□□□□ -0.33
CASC3-201ENST00000264645 MFAP2P55001 183 aa13.02□□□□□ -0.33
CASC3-201ENST00000264645 NHLH1Q02575 133 aa13.02□□□□□ -0.33
CASC3-201ENST00000264645 PLPPR5Q32ZL2 321 aa13.02□□□□□ -0.33
CASC3-201ENST00000264645 TMEM251Q8N6I4 163 aa13.02□□□□□ -0.33
CASC3-201ENST00000264645 AGBL5Q8NDL9 886 aa13.02□□□□□ -0.33
CASC3-201ENST00000264645 HSD17B10Q99714 261 aaKnown RBP13.02□□□□□ -0.33
CASC3-201ENST00000264645 OR6C3Q9NZP0 311 aa13.02□□□□□ -0.33
CASC3-201ENST00000264645 SCN5AQ14524 2016 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 LOC285556D6RIA3 1793 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 TMEM30CPA0ZSE6 113 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 RPL23P62829 140 aaKnown RBP13.01□□□□□ -0.33
CASC3-201ENST00000264645 C10orf91Q5T1B1 145 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 MOB1BQ7L9L4 216 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 ANKRD37Q7Z713 158 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 TGIF2LYQ8IUE0 185 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 ROS1P08922 2347 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 OTX1P32242 354 aaPredicted RBP13.01□□□□□ -0.33
CASC3-201ENST00000264645 EXT1Q16394 746 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 MRGPRDQ8TDS7 321 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 CHRDL1Q9BU40 450 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 TRBV24-1A0A075B6N3 115 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 LDLRAD4O15165 306 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 APCSP02743 223 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 CCR5P51681 352 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 LYSMD4Q5XG99 296 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 BEND2Q8NDZ0 799 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 OR2D3Q8NGH3 330 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 OR10S1Q8NGN2 331 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 WBP1Q96G27 269 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 TMEM208Q9BTX3 173 aa13.01□□□□□ -0.33
CASC3-201ENST00000264645 RNF144BQ7Z419 303 aa13□□□□□ -0.33
CASC3-201ENST00000264645 TMEM170AQ8WVE7 144 aa13□□□□□ -0.33
CASC3-201ENST00000264645 HEATR5AQ86XA9 2040 aa13□□□□□ -0.33
CASC3-201ENST00000264645 A8MWP6 167 aa13□□□□□ -0.33
CASC3-201ENST00000264645 SFTPCP11686 197 aa13□□□□□ -0.33
CASC3-201ENST00000264645 DUSP3P51452 185 aaPredicted RBP13□□□□□ -0.33
CASC3-201ENST00000264645 ZNF658BQ4V348 819 aaPredicted RBP13□□□□□ -0.33
CASC3-201ENST00000264645 HES3Q5TGS1 186 aa13□□□□□ -0.33
CASC3-201ENST00000264645 Q6ZS52 159 aa13□□□□□ -0.33
CASC3-201ENST00000264645 FA2HQ7L5A8 372 aa13□□□□□ -0.33
CASC3-201ENST00000264645 SH2D2AQ9NP31 389 aa13□□□□□ -0.33
CASC3-201ENST00000264645 TSC2P49815 1807 aa13□□□□□ -0.33
CASC3-201ENST00000264645 SRIP30626 198 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms