RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 SPDEFO95238 335 aa13.15□□□□□ -0.31
VPS26A-201ENST00000263559 MBPP02686 304 aaPredicted RBP13.15□□□□□ -0.31
VPS26A-201ENST00000263559 TFF3Q07654 80 aa13.15□□□□□ -0.31
VPS26A-201ENST00000263559 EFNB3Q15768 340 aa13.15□□□□□ -0.31
VPS26A-201ENST00000263559 ZNF788Q6ZQV5 615 aa13.15□□□□□ -0.31
VPS26A-201ENST00000263559 PCNPQ8WW12 178 aaKnown RBP13.15□□□□□ -0.31
VPS26A-201ENST00000263559 RBPMSQ93062 196 aaKnown RBP13.15□□□□□ -0.31
VPS26A-201ENST00000263559 MS4A5Q9H3V2 200 aa13.15□□□□□ -0.31
VPS26A-201ENST00000263559 ZNF665Q9H7R5 613 aa13.15□□□□□ -0.31
VPS26A-201ENST00000263559 TANC2Q9HCD6 1990 aa13.14□□□□□ -0.31
VPS26A-201ENST00000263559 DEFB108AA8MXU0 73 aa13.14□□□□□ -0.31
VPS26A-201ENST00000263559 B9A039 149 aa13.14□□□□□ -0.31
VPS26A-201ENST00000263559 HTD2P86397 168 aa13.14□□□□□ -0.31
VPS26A-201ENST00000263559 LTC4SQ16873 150 aa13.14□□□□□ -0.31
VPS26A-201ENST00000263559 ALKAL2Q6UX46 152 aa13.14□□□□□ -0.31
VPS26A-201ENST00000263559 FAM216BQ8N7L0 139 aa13.14□□□□□ -0.31
VPS26A-201ENST00000263559 OR2D2Q9H210 308 aa13.14□□□□□ -0.31
VPS26A-201ENST00000263559 ANKHD1Q8IWZ3 2542 aaKnown RBP13.14□□□□□ -0.31
VPS26A-201ENST00000263559 DEDDO75618 318 aa13.14□□□□□ -0.31
VPS26A-201ENST00000263559 WNT2P09544 360 aa13.14□□□□□ -0.31
VPS26A-201ENST00000263559 ZNF645Q8N7E2 425 aa13.14□□□□□ -0.31
VPS26A-201ENST00000263559 CCL17Q92583 94 aa13.14□□□□□ -0.31
VPS26A-201ENST00000263559 HIVEP3Q5T1R4 2406 aa13.13□□□□□ -0.31
VPS26A-201ENST00000263559 RLN2P04090 185 aa13.13□□□□□ -0.31
VPS26A-201ENST00000263559 GALNT11Q8NCW6 608 aa13.13□□□□□ -0.31
VPS26A-201ENST00000263559 C14orf79Q96F83 325 aa13.13□□□□□ -0.31
VPS26A-201ENST00000263559 TMEM178BH3BS89 294 aa13.13□□□□□ -0.31
VPS26A-201ENST00000263559 K7EPK0 472 aa13.13□□□□□ -0.31
VPS26A-201ENST00000263559 B3GALNT1O75752 331 aa13.13□□□□□ -0.31
VPS26A-201ENST00000263559 SERPINE2P07093 398 aa13.13□□□□□ -0.31
VPS26A-201ENST00000263559 ZNF16P17020 682 aaPredicted RBP13.13□□□□□ -0.31
VPS26A-201ENST00000263559 NUP62P37198 522 aaPredicted RBP13.13□□□□□ -0.31
VPS26A-201ENST00000263559 SMCO1Q147U7 214 aa13.13□□□□□ -0.31
VPS26A-201ENST00000263559 FAM71E2Q8N5Q1 922 aa13.13□□□□□ -0.31
VPS26A-201ENST00000263559 OR4D5Q8NGN0 318 aa13.13□□□□□ -0.31
VPS26A-201ENST00000263559 ST8SIA2Q92186 375 aa13.13□□□□□ -0.31
VPS26A-201ENST00000263559 IL22RA2Q969J5 263 aa13.13□□□□□ -0.31
VPS26A-201ENST00000263559 C5orf30Q96GV9 206 aa13.13□□□□□ -0.31
VPS26A-201ENST00000263559 AQP10Q96PS8 301 aa13.13□□□□□ -0.31
VPS26A-201ENST00000263559 ARPC5LQ9BPX5 153 aa13.13□□□□□ -0.31
VPS26A-201ENST00000263559 ZNF471Q9BX82 626 aaPredicted RBP13.13□□□□□ -0.31
VPS26A-201ENST00000263559 OR6C3Q9NZP0 311 aa13.13□□□□□ -0.31
VPS26A-201ENST00000263559 DUXBA0A1W2PPF3 345 aa13.12□□□□□ -0.31
VPS26A-201ENST00000263559 RPS10-NUDT3A0A1W2PQS6 291 aa13.12□□□□□ -0.31
VPS26A-201ENST00000263559 ADAM20O43506 726 aa13.12□□□□□ -0.31
VPS26A-201ENST00000263559 CGB3P0DN86 165 aa13.12□□□□□ -0.31
VPS26A-201ENST00000263559 CGB7P0DN87 165 aa13.12□□□□□ -0.31
VPS26A-201ENST00000263559 VDAC1P21796 283 aa13.12□□□□□ -0.31
VPS26A-201ENST00000263559 LOXP28300 417 aaPredicted RBP13.12□□□□□ -0.31
VPS26A-201ENST00000263559 UQCRFS1P47985 274 aa13.12□□□□□ -0.31
VPS26A-201ENST00000263559 NMSQ5H8A3 153 aa13.12□□□□□ -0.31
VPS26A-201ENST00000263559 GSX2Q9BZM3 304 aa13.12□□□□□ -0.31
VPS26A-201ENST00000263559 NCOR1P1Q9H4R4 102 aa13.12□□□□□ -0.31
VPS26A-201ENST00000263559 TMEM106BQ9NUM4 274 aa13.12□□□□□ -0.31
VPS26A-201ENST00000263559 LGALS8O00214 317 aa13.12□□□□□ -0.31
VPS26A-201ENST00000263559 SIGLEC5O15389 551 aa13.12□□□□□ -0.31
VPS26A-201ENST00000263559 OMGP23515 440 aa13.12□□□□□ -0.31
VPS26A-201ENST00000263559 PLA2G5P39877 138 aa13.12□□□□□ -0.31
VPS26A-201ENST00000263559 SWI5Q1ZZU3 235 aa13.12□□□□□ -0.31
VPS26A-201ENST00000263559 ESCO2Q56NI9 601 aa13.12□□□□□ -0.31
VPS26A-201ENST00000263559 C1orf87Q8N0U7 546 aa13.12□□□□□ -0.31
VPS26A-201ENST00000263559 FGFRL1Q8N441 504 aa13.12□□□□□ -0.31
VPS26A-201ENST00000263559 FAM234AQ9H0X4 552 aa13.12□□□□□ -0.31
VPS26A-201ENST00000263559 PPIAL4EA0A075B759 164 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 TRAV38-1A0A0B4J264 116 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 F5H0A9 414 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-201ENST00000263559 PPIAL4DF5H284 164 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 TMPRSS2O15393 492 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 IGKV1-39P01597 117 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 IGKV1D-39P04432 117 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 PPIAL4FP0DN26 164 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 HKR1P10072 659 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 UBA52P62987 128 aaKnown RBP13.11□□□□□ -0.31
VPS26A-201ENST00000263559 ZNF672Q499Z4 452 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-201ENST00000263559 CLLU1Q5K131 121 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 MUC15Q8N387 334 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 ZNF808Q8N4W9 903 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-201ENST00000263559 ZBTB34Q8NCN2 500 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 SCARB1Q8WTV0 552 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 AGMATQ9BSE5 352 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 PLEKHF2Q9H8W4 249 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 CALYQ9NYX4 217 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 PPIAL4AQ9Y536 164 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 ST8SIA3O43173 380 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 C17orf58Q2M2W7 97 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 MORN2Q502X0 79 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 ZNF585BQ52M93 769 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 ABHD14BQ96IU4 210 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 LIN7CQ9NUP9 197 aaKnown RBP13.11□□□□□ -0.31
VPS26A-201ENST00000263559 GNG12Q9UBI6 72 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 PSG11Q9UQ72 335 aa13.11□□□□□ -0.31
VPS26A-201ENST00000263559 F2RL2O00254 374 aa13.1□□□□□ -0.31
VPS26A-201ENST00000263559 ST8SIA5O15466 376 aa13.1□□□□□ -0.31
VPS26A-201ENST00000263559 GNLYP22749 145 aa13.1□□□□□ -0.31
VPS26A-201ENST00000263559 LOXL3P58215 753 aa13.1□□□□□ -0.31
VPS26A-201ENST00000263559 EIF4EBP1Q13541 118 aaPredicted RBP13.1□□□□□ -0.31
VPS26A-201ENST00000263559 SPIN2AQ99865 258 aa13.1□□□□□ -0.31
VPS26A-201ENST00000263559 SPIN2BQ9BPZ2 258 aa13.1□□□□□ -0.31
VPS26A-201ENST00000263559 JPT1Q9UK76 154 aa13.1□□□□□ -0.31
VPS26A-201ENST00000263559 A0A0G2JRQ6 117 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms