RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 KIR2DS4P43632 304 aa13.99□□□□□ -0.17
ZNF541-201ENST00000263351 BAXQ07812 192 aa13.99□□□□□ -0.17
ZNF541-201ENST00000263351 KIR2DS1Q14954 304 aa13.99□□□□□ -0.17
ZNF541-201ENST00000263351 FAM58AQ8N1B3 248 aa13.99□□□□□ -0.17
ZNF541-201ENST00000263351 RPP25LQ8N5L8 163 aaKnown RBP13.99□□□□□ -0.17
ZNF541-201ENST00000263351 OR10V1Q8NGI7 309 aa13.99□□□□□ -0.17
ZNF541-201ENST00000263351 POM121L2Q96KW2 1035 aa13.99□□□□□ -0.17
ZNF541-201ENST00000263351 A0A1B0GU03 582 aa13.98□□□□□ -0.17
ZNF541-201ENST00000263351 SEC14L6B5MCN3 397 aa13.98□□□□□ -0.17
ZNF541-201ENST00000263351 NEURL1O76050 574 aa13.98□□□□□ -0.17
ZNF541-201ENST00000263351 CEACAM1P13688 526 aa13.98□□□□□ -0.17
ZNF541-201ENST00000263351 CLDN18P56856 261 aa13.98□□□□□ -0.17
ZNF541-201ENST00000263351 ZNF816Q0VGE8 651 aaPredicted RBP13.98□□□□□ -0.17
ZNF541-201ENST00000263351 TPRX1Q8N7U7 411 aa13.98□□□□□ -0.17
ZNF541-201ENST00000263351 C5orf30Q96GV9 206 aa13.98□□□□□ -0.17
ZNF541-201ENST00000263351 CLN8Q9UBY8 286 aa13.98□□□□□ -0.17
ZNF541-201ENST00000263351 ZNF391Q9UJN7 358 aa13.98□□□□□ -0.17
ZNF541-201ENST00000263351 GAB2Q9UQC2 676 aa13.98□□□□□ -0.17
ZNF541-201ENST00000263351 DMXL1Q9Y485 3027 aa13.98□□□□□ -0.17
ZNF541-201ENST00000263351 TNRC6AQ8NDV7 1962 aaKnown RBP13.98□□□□□ -0.17
ZNF541-201ENST00000263351 A0A087WWC5 75 aa13.98□□□□□ -0.17
ZNF541-201ENST00000263351 A0A1B0GV90 55 aa13.98□□□□□ -0.17
ZNF541-201ENST00000263351 ZNF729A6NN14 1252 aaPredicted RBP13.98□□□□□ -0.17
ZNF541-201ENST00000263351 P2RY6Q15077 328 aa13.98□□□□□ -0.17
ZNF541-201ENST00000263351 ACSM6Q6P461 480 aa13.98□□□□□ -0.17
ZNF541-201ENST00000263351 BTNL3Q6UXE8 466 aa13.98□□□□□ -0.17
ZNF541-201ENST00000263351 SLC35E3Q7Z769 313 aa13.98□□□□□ -0.17
ZNF541-201ENST00000263351 SCGB1C1Q8TD33 95 aa13.98□□□□□ -0.17
ZNF541-201ENST00000263351 ZDHHC16Q969W1 377 aa13.98□□□□□ -0.17
ZNF541-201ENST00000263351 WDYHV1Q96HA8 205 aa13.98□□□□□ -0.17
ZNF541-201ENST00000263351 MAP1LC3B2A6NCE7 125 aa13.97□□□□□ -0.17
ZNF541-201ENST00000263351 BTBD17A6NE02 478 aa13.97□□□□□ -0.17
ZNF541-201ENST00000263351 PHOX2AO14813 284 aa13.97□□□□□ -0.17
ZNF541-201ENST00000263351 KRASP01116 189 aa13.97□□□□□ -0.17
ZNF541-201ENST00000263351 CD81P60033 236 aa13.97□□□□□ -0.17
ZNF541-201ENST00000263351 PMP22Q01453 160 aa13.97□□□□□ -0.17
ZNF541-201ENST00000263351 ZNF600Q6ZNG1 722 aa13.97□□□□□ -0.17
ZNF541-201ENST00000263351 C14orf144Q96I85 54 aa13.97□□□□□ -0.17
ZNF541-201ENST00000263351 CABLES2Q9BTV7 478 aa13.97□□□□□ -0.17
ZNF541-201ENST00000263351 MAP1LC3BQ9GZQ8 125 aa13.97□□□□□ -0.17
ZNF541-201ENST00000263351 SDF2L1Q9HCN8 221 aa13.97□□□□□ -0.17
ZNF541-201ENST00000263351 DEGS1O15121 323 aa13.97□□□□□ -0.17
ZNF541-201ENST00000263351 DNPH1O43598 174 aa13.97□□□□□ -0.17
ZNF541-201ENST00000263351 SOX15O60248 233 aa13.97□□□□□ -0.17
ZNF541-201ENST00000263351 G6PCP35575 357 aa13.97□□□□□ -0.17
ZNF541-201ENST00000263351 MDH2P40926 338 aaKnown RBP13.97□□□□□ -0.17
ZNF541-201ENST00000263351 Q6ZS49 121 aa13.97□□□□□ -0.17
ZNF541-201ENST00000263351 APOBEC3DQ96AK3 386 aaPredicted RBP13.97□□□□□ -0.17
ZNF541-201ENST00000263351 HIST1H2AAQ96QV6 131 aa13.97□□□□□ -0.17
ZNF541-201ENST00000263351 UNKLQ9H9P5 680 aaKnown RBP13.97□□□□□ -0.17
ZNF541-201ENST00000263351 TREM2Q9NZC2 230 aa13.97□□□□□ -0.17
ZNF541-201ENST00000263351 MAP1BP46821 2468 aaKnown RBP13.97□□□□□ -0.17
ZNF541-201ENST00000263351 CADP27708 2225 aa13.97□□□□□ -0.17
ZNF541-201ENST00000263351 CDIPTO14735 213 aa13.96□□□□□ -0.17
ZNF541-201ENST00000263351 RPL30P62888 115 aaKnown RBP13.96□□□□□ -0.17
ZNF541-201ENST00000263351 C16orf82Q7Z2V1 217 aa13.96□□□□□ -0.17
ZNF541-201ENST00000263351 DMRTC2Q8IXT2 367 aaPredicted RBP13.96□□□□□ -0.17
ZNF541-201ENST00000263351 HIST1H2BLQ99880 126 aa13.96□□□□□ -0.17
ZNF541-201ENST00000263351 ZNF703Q9H7S9 590 aaPredicted RBP13.96□□□□□ -0.17
ZNF541-201ENST00000263351 TRAPPC2LQ9UL33 140 aa13.96□□□□□ -0.17
ZNF541-201ENST00000263351 RP1L1Q8IWN7 2480 aaPredicted RBP13.96□□□□□ -0.17
ZNF541-201ENST00000263351 TNRC6BQ9UPQ9 1833 aaKnown RBP13.96□□□□□ -0.17
ZNF541-201ENST00000263351 A0A1B0GUS0 222 aa13.96□□□□□ -0.17
ZNF541-201ENST00000263351 OR5H1A6NKK0 313 aa13.96□□□□□ -0.17
ZNF541-201ENST00000263351 WNT9BO14905 357 aa13.96□□□□□ -0.17
ZNF541-201ENST00000263351 CLDN1O95832 211 aa13.96□□□□□ -0.17
ZNF541-201ENST00000263351 OR2H2O95918 312 aa13.96□□□□□ -0.17
ZNF541-201ENST00000263351 CEACAM6P40199 344 aa13.96□□□□□ -0.17
ZNF541-201ENST00000263351 TFF3Q07654 80 aa13.96□□□□□ -0.17
ZNF541-201ENST00000263351 Q6P435 159 aa13.96□□□□□ -0.17
ZNF541-201ENST00000263351 ZNF826PQ6ZT77 177 aa13.96□□□□□ -0.17
ZNF541-201ENST00000263351 C1orf87Q8N0U7 546 aa13.96□□□□□ -0.17
ZNF541-201ENST00000263351 DRAM1Q8N682 238 aa13.96□□□□□ -0.17
ZNF541-201ENST00000263351 OR2M7Q8NG81 312 aa13.96□□□□□ -0.17
ZNF541-201ENST00000263351 OR4X1Q8NH49 305 aa13.96□□□□□ -0.17
ZNF541-201ENST00000263351 OR8G5Q8NG78 346 aa13.95□□□□□ -0.18
ZNF541-201ENST00000263351 OR1L1Q8NH94 360 aa13.95□□□□□ -0.18
ZNF541-201ENST00000263351 PACRGQ96M98 296 aaPredicted RBP13.95□□□□□ -0.18
ZNF541-201ENST00000263351 SMDT1Q9H4I9 107 aa13.95□□□□□ -0.18
ZNF541-201ENST00000263351 CISD1Q9NZ45 108 aaKnown RBP13.95□□□□□ -0.18
ZNF541-201ENST00000263351 ZNF737O75373 536 aa13.95□□□□□ -0.18
ZNF541-201ENST00000263351 WISP2O76076 250 aa13.95□□□□□ -0.18
ZNF541-201ENST00000263351 COL10A1Q03692 680 aa13.95□□□□□ -0.18
ZNF541-201ENST00000263351 GCSAMLQ5JQS6 135 aa13.95□□□□□ -0.18
ZNF541-201ENST00000263351 LHX4Q969G2 390 aa13.95□□□□□ -0.18
ZNF541-201ENST00000263351 SMIM7Q9BQ49 75 aa13.95□□□□□ -0.18
ZNF541-201ENST00000263351 LAMP3Q9UQV4 416 aa13.95□□□□□ -0.18
ZNF541-201ENST00000263351 IGHV3-43A0A0B4J1X8 118 aa13.94□□□□□ -0.18
ZNF541-201ENST00000263351 CLDN34H7C241 214 aa13.94□□□□□ -0.18
ZNF541-201ENST00000263351 DFFBO76075 338 aa13.94□□□□□ -0.18
ZNF541-201ENST00000263351 IGHV3-13P01766 116 aa13.94□□□□□ -0.18
ZNF541-201ENST00000263351 IGHV3-7P01780 117 aa13.94□□□□□ -0.18
ZNF541-201ENST00000263351 HBE1P02100 147 aa13.94□□□□□ -0.18
ZNF541-201ENST00000263351 GRPP07492 148 aa13.94□□□□□ -0.18
ZNF541-201ENST00000263351 IGHV3-43DP0DP04 118 aa13.94□□□□□ -0.18
ZNF541-201ENST00000263351 DEFA6Q01524 100 aa13.94□□□□□ -0.18
ZNF541-201ENST00000263351 RNPS1Q15287 305 aaKnown RBP13.94□□□□□ -0.18
ZNF541-201ENST00000263351 FGFRL1Q8N441 504 aa13.94□□□□□ -0.18
ZNF541-201ENST00000263351 WDR61Q9GZS3 305 aaKnown RBP13.94□□□□□ -0.18
ZNF541-201ENST00000263351 MGAQ8IWI9 3026 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms