RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 GHITMQ9H3K2 345 aa9.59□□□□□ -0.87
TRAF4-202ENST00000262396 PLSCR3Q9NRY6 295 aa9.59□□□□□ -0.87
TRAF4-202ENST00000262396 A3GALT2U3KPV4 340 aa9.59□□□□□ -0.87
TRAF4-202ENST00000262396 TRBV5-7A0A0A0MS05 114 aa9.58□□□□□ -0.88
TRAF4-202ENST00000262396 ATP6V0E1O15342 81 aa9.58□□□□□ -0.88
TRAF4-202ENST00000262396 HSPA12AO43301 675 aa9.58□□□□□ -0.88
TRAF4-202ENST00000262396 IGF1P05019 195 aa9.58□□□□□ -0.88
TRAF4-202ENST00000262396 ZNF137PP52743 207 aa9.58□□□□□ -0.88
TRAF4-202ENST00000262396 GNMTQ14749 295 aa9.58□□□□□ -0.88
TRAF4-202ENST00000262396 ZNF554Q86TJ5 538 aa9.58□□□□□ -0.88
TRAF4-202ENST00000262396 PACRGLQ8N7B6 248 aa9.58□□□□□ -0.88
TRAF4-202ENST00000262396 ZNF439Q8NDP4 499 aa9.58□□□□□ -0.88
TRAF4-202ENST00000262396 PGLYRP3Q96LB9 341 aa9.58□□□□□ -0.88
TRAF4-202ENST00000262396 UBE2E2Q96LR5 201 aa9.58□□□□□ -0.88
TRAF4-202ENST00000262396 Q96M66 194 aa9.58□□□□□ -0.88
TRAF4-202ENST00000262396 TMEM59Q9BXS4 323 aa9.58□□□□□ -0.88
TRAF4-202ENST00000262396 OR51J1Q9H342 316 aa9.58□□□□□ -0.88
TRAF4-202ENST00000262396 CNOT2Q9NZN8 540 aaKnown RBP9.58□□□□□ -0.88
TRAF4-202ENST00000262396 PIPOXQ9P0Z9 390 aa9.58□□□□□ -0.88
TRAF4-202ENST00000262396 RNF150Q9ULK6 438 aa9.58□□□□□ -0.88
TRAF4-202ENST00000262396 ZNF256Q9Y2P7 627 aaPredicted RBP9.58□□□□□ -0.88
TRAF4-202ENST00000262396 DNAH3Q8TD57 4116 aa9.58□□□□□ -0.88
TRAF4-202ENST00000262396 A0A1W2PN81 502 aa9.57□□□□□ -0.88
TRAF4-202ENST00000262396 YPEL1O60688 119 aa9.57□□□□□ -0.88
TRAF4-202ENST00000262396 SAP30O75446 220 aa9.57□□□□□ -0.88
TRAF4-202ENST00000262396 PSMB8P28062 276 aa9.57□□□□□ -0.88
TRAF4-202ENST00000262396 CHRNA7P36544 502 aa9.57□□□□□ -0.88
TRAF4-202ENST00000262396 INSL3P51460 131 aa9.57□□□□□ -0.88
TRAF4-202ENST00000262396 RPS11P62280 158 aaKnown RBP eCLIP9.57□□□□□ -0.88
TRAF4-202ENST00000262396 HTD2P86397 168 aa9.57□□□□□ -0.88
TRAF4-202ENST00000262396 TMEM267Q0VDI3 215 aaPredicted RBP9.57□□□□□ -0.88
TRAF4-202ENST00000262396 ACSM3Q53FZ2 586 aa9.57□□□□□ -0.88
TRAF4-202ENST00000262396 KCNG3Q8TAE7 436 aa9.57□□□□□ -0.88
TRAF4-202ENST00000262396 MRPL30Q8TCC3 161 aaKnown RBP9.57□□□□□ -0.88
TRAF4-202ENST00000262396 YPEL2Q96QA6 119 aa9.57□□□□□ -0.88
TRAF4-202ENST00000262396 FAAP24Q9BTP7 215 aa9.57□□□□□ -0.88
TRAF4-202ENST00000262396 TMED9Q9BVK6 235 aa9.57□□□□□ -0.88
TRAF4-202ENST00000262396 ANKRD60Q9BZ19 345 aa9.57□□□□□ -0.88
TRAF4-202ENST00000262396 PLEKHJ1Q9NW61 149 aa9.57□□□□□ -0.88
TRAF4-202ENST00000262396 SMAD5-AS1Q9Y6J3 95 aa9.57□□□□□ -0.88
TRAF4-202ENST00000262396 G3V318 75 aa9.56□□□□□ -0.88
TRAF4-202ENST00000262396 OVOL1O14753 267 aa9.56□□□□□ -0.88
TRAF4-202ENST00000262396 RAB29O14966 203 aa9.56□□□□□ -0.88
TRAF4-202ENST00000262396 HLA-DRB1P01911 266 aa9.56□□□□□ -0.88
TRAF4-202ENST00000262396 CNTFRP26992 372 aa9.56□□□□□ -0.88
TRAF4-202ENST00000262396 BLVRBP30043 206 aaPredicted RBP9.56□□□□□ -0.88
TRAF4-202ENST00000262396 OR3A3P47888 321 aa9.56□□□□□ -0.88
TRAF4-202ENST00000262396 RAB9AP51151 201 aa9.56□□□□□ -0.88
TRAF4-202ENST00000262396 MRPS15P82914 257 aaKnown RBP9.56□□□□□ -0.88
TRAF4-202ENST00000262396 RCN1Q15293 331 aa9.56□□□□□ -0.88
TRAF4-202ENST00000262396 C5orf64Q2M2E5 130 aa9.56□□□□□ -0.88
TRAF4-202ENST00000262396 HSD17B12Q53GQ0 312 aa9.56□□□□□ -0.88
TRAF4-202ENST00000262396 C6orf141Q5SZD1 244 aa9.56□□□□□ -0.88
TRAF4-202ENST00000262396 MS4A15Q8N5U1 240 aa9.56□□□□□ -0.88
TRAF4-202ENST00000262396 RNF152Q8N8N0 203 aa9.56□□□□□ -0.88
TRAF4-202ENST00000262396 RBMXL1Q96E39 390 aaKnown RBP9.56□□□□□ -0.88
TRAF4-202ENST00000262396 CLCC1Q96S66 551 aa9.56□□□□□ -0.88
TRAF4-202ENST00000262396 NABP2Q9BQ15 211 aa9.56□□□□□ -0.88
TRAF4-202ENST00000262396 URM1Q9BTM9 101 aaKnown RBP9.56□□□□□ -0.88
TRAF4-202ENST00000262396 MND1Q9BWT6 205 aa9.56□□□□□ -0.88
TRAF4-202ENST00000262396 GNB4Q9HAV0 340 aa9.56□□□□□ -0.88
TRAF4-202ENST00000262396 PLGRKTQ9HBL7 147 aa9.56□□□□□ -0.88
TRAF4-202ENST00000262396 ZNF355PQ9NSJ1 428 aa9.56□□□□□ -0.88
TRAF4-202ENST00000262396 MBNL3Q9NUK0 354 aaKnown RBP9.56□□□□□ -0.88
TRAF4-202ENST00000262396 SAA2-SAA4A0A096LPE2 208 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 PTGES3LE9PB15 166 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 ST8SIA5O15466 376 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 SC5DO75845 299 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 CD1AP06126 327 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 SAA2P0DJI9 122 aaPredicted RBP9.55□□□□□ -0.88
TRAF4-202ENST00000262396 HTR2CP28335 458 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 MC5RP33032 325 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 CFHR3Q02985 330 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 OR10K2Q6IF99 312 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 FAM131AQ6UXB0 335 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 MOB1BQ7L9L4 216 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 C6orf201Q7Z4U5 140 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 CEACAM19Q7Z692 300 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 ZNF429Q86V71 674 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 GAPTQ8N292 157 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 ZNF491Q8N8L2 437 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 EDARADDQ8WWZ3 215 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 OR4C12Q96R67 309 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 KLK15Q9H2R5 256 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 FBXL15Q9H469 300 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 ISYNA1Q9NPH2 558 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 SCN3BQ9NY72 215 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 SLC23A1Q9UHI7 598 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 PSORS1C1Q9UIG5 152 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 ZNF580Q9UK33 172 aa9.55□□□□□ -0.88
TRAF4-202ENST00000262396 FOXA2Q9Y261 457 aaPredicted RBP9.55□□□□□ -0.88
TRAF4-202ENST00000262396 IGHV7-81A0A0B4J1V7 117 aa9.54□□□□□ -0.88
TRAF4-202ENST00000262396 OR5H14A6NHG9 310 aa9.54□□□□□ -0.88
TRAF4-202ENST00000262396 LINC01619G3V211 115 aa9.54□□□□□ -0.88
TRAF4-202ENST00000262396 CPEP16870 476 aa9.54□□□□□ -0.88
TRAF4-202ENST00000262396 RANBP1P43487 201 aa9.54□□□□□ -0.88
TRAF4-202ENST00000262396 RPS27AP62979 156 aaKnown RBP9.54□□□□□ -0.88
TRAF4-202ENST00000262396 PITPNAQ00169 270 aa9.54□□□□□ -0.88
TRAF4-202ENST00000262396 MED22Q15528 200 aa9.54□□□□□ -0.88
TRAF4-202ENST00000262396 ZNF660Q6AZW8 331 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms