RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 MS4A15Q8N5U1 240 aa14.88□□□□□ -0.03
TM6SF1-201ENST00000258909 KCTD7Q96MP8 289 aa14.88□□□□□ -0.03
TM6SF1-201ENST00000258909 NABP2Q9BQ15 211 aa14.88□□□□□ -0.03
TM6SF1-201ENST00000258909 WSB1Q9Y6I7 421 aa14.88□□□□□ -0.03
TM6SF1-201ENST00000258909 YPEL1O60688 119 aa14.87□□□□□ -0.03
TM6SF1-201ENST00000258909 IGHG4P01861 327 aa14.87□□□□□ -0.03
TM6SF1-201ENST00000258909 UBBP0CG47 229 aa14.87□□□□□ -0.03
TM6SF1-201ENST00000258909 CDX1P47902 265 aaPredicted RBP14.87□□□□□ -0.03
TM6SF1-201ENST00000258909 LUMP51884 338 aaPredicted RBP14.87□□□□□ -0.03
TM6SF1-201ENST00000258909 ACTBP60709 375 aa14.87□□□□□ -0.03
TM6SF1-201ENST00000258909 HTD2P86397 168 aa14.87□□□□□ -0.03
TM6SF1-201ENST00000258909 UNC119Q13432 240 aa14.87□□□□□ -0.03
TM6SF1-201ENST00000258909 MED22Q15528 200 aa14.87□□□□□ -0.03
TM6SF1-201ENST00000258909 VAX1Q5SQQ9 334 aa14.87□□□□□ -0.03
TM6SF1-201ENST00000258909 C1orf100Q5SVJ3 147 aa14.87□□□□□ -0.03
TM6SF1-201ENST00000258909 ZNF554Q86TJ5 538 aa14.87□□□□□ -0.03
TM6SF1-201ENST00000258909 RNF152Q8N8N0 203 aa14.87□□□□□ -0.03
TM6SF1-201ENST00000258909 IL1F10Q8WWZ1 152 aa14.87□□□□□ -0.03
TM6SF1-201ENST00000258909 GALMQ96C23 342 aa14.87□□□□□ -0.03
TM6SF1-201ENST00000258909 YPEL2Q96QA6 119 aa14.87□□□□□ -0.03
TM6SF1-201ENST00000258909 TMEM59Q9BXS4 323 aa14.87□□□□□ -0.03
TM6SF1-201ENST00000258909 LSM2Q9Y333 95 aaKnown RBP14.87□□□□□ -0.03
TM6SF1-201ENST00000258909 KMT2CQ8NEZ4 4911 aaKnown RBP14.86□□□□□ -0.03
TM6SF1-201ENST00000258909 IGF1P05019 195 aa14.86□□□□□ -0.03
TM6SF1-201ENST00000258909 SRMP19623 302 aa14.86□□□□□ -0.03
TM6SF1-201ENST00000258909 KIR2DS1Q14954 304 aa14.86□□□□□ -0.03
TM6SF1-201ENST00000258909 SPHARQ15513 63 aa14.86□□□□□ -0.03
TM6SF1-201ENST00000258909 HMGN3Q15651 99 aa14.86□□□□□ -0.03
TM6SF1-201ENST00000258909 HSD17B12Q53GQ0 312 aa14.86□□□□□ -0.03
TM6SF1-201ENST00000258909 OR8U1Q8NH10 309 aa14.86□□□□□ -0.03
TM6SF1-201ENST00000258909 SETD6Q8TBK2 473 aa14.86□□□□□ -0.03
TM6SF1-201ENST00000258909 TMEM203Q969S6 136 aa14.86□□□□□ -0.03
TM6SF1-201ENST00000258909 SAA2-SAA4A0A096LPE2 208 aa14.85□□□□□ -0.03
TM6SF1-201ENST00000258909 G3V318 75 aa14.85□□□□□ -0.03
TM6SF1-201ENST00000258909 SAA2P0DJI9 122 aaPredicted RBP14.85□□□□□ -0.03
TM6SF1-201ENST00000258909 DGCR2P98153 550 aa14.85□□□□□ -0.03
TM6SF1-201ENST00000258909 CD69Q07108 199 aa14.85□□□□□ -0.03
TM6SF1-201ENST00000258909 RNLSQ5VYX0 342 aa14.85□□□□□ -0.03
TM6SF1-201ENST00000258909 ZNF833PQ6ZTB9 187 aa14.85□□□□□ -0.03
TM6SF1-201ENST00000258909 OR2AK2Q8NG84 335 aa14.85□□□□□ -0.03
TM6SF1-201ENST00000258909 PHYHIPQ92561 330 aa14.85□□□□□ -0.03
TM6SF1-201ENST00000258909 ZNF251Q9BRH9 671 aa14.85□□□□□ -0.03
TM6SF1-201ENST00000258909 ANKRD60Q9BZ19 345 aa14.85□□□□□ -0.03
TM6SF1-201ENST00000258909 KLK15Q9H2R5 256 aa14.85□□□□□ -0.03
TM6SF1-201ENST00000258909 VCXQ9H320 206 aa14.85□□□□□ -0.03
TM6SF1-201ENST00000258909 CHMP1AQ9HD42 196 aaPredicted RBP14.85□□□□□ -0.03
TM6SF1-201ENST00000258909 NKX1-2Q9UD57 310 aaPredicted RBP14.85□□□□□ -0.03
TM6SF1-201ENST00000258909 A0A0A6YYD4 124 aa14.84□□□□□ -0.03
TM6SF1-201ENST00000258909 ST8SIA5O15466 376 aa14.84□□□□□ -0.03
TM6SF1-201ENST00000258909 RGS11O94810 467 aa14.84□□□□□ -0.03
TM6SF1-201ENST00000258909 PSMB8P28062 276 aa14.84□□□□□ -0.03
TM6SF1-201ENST00000258909 BLVRBP30043 206 aaPredicted RBP14.84□□□□□ -0.03
TM6SF1-201ENST00000258909 LIPKQ5VXJ0 399 aa14.84□□□□□ -0.03
TM6SF1-201ENST00000258909 SVOPQ8N4V2 548 aa14.84□□□□□ -0.03
TM6SF1-201ENST00000258909 KCNG3Q8TAE7 436 aa14.84□□□□□ -0.03
TM6SF1-201ENST00000258909 PARP12Q9H0J9 701 aaKnown RBP14.84□□□□□ -0.03
TM6SF1-201ENST00000258909 IFI27L2Q9H2X8 130 aa14.84□□□□□ -0.03
TM6SF1-201ENST00000258909 PARP11Q9NR21 331 aa14.84□□□□□ -0.03
TM6SF1-201ENST00000258909 ABRACLQ9P1F3 81 aa14.84□□□□□ -0.03
TM6SF1-201ENST00000258909 TENM3Q9P273 2699 aa14.84□□□□□ -0.03
TM6SF1-201ENST00000258909 SLC22A1O15245 554 aa14.83□□□□□ -0.03
TM6SF1-201ENST00000258909 ATP6V0E1O15342 81 aa14.83□□□□□ -0.03
TM6SF1-201ENST00000258909 QRFPP83859 136 aa14.83□□□□□ -0.03
TM6SF1-201ENST00000258909 P2RY14Q15391 338 aa14.83□□□□□ -0.03
TM6SF1-201ENST00000258909 OR5M8Q8NGP6 311 aa14.83□□□□□ -0.03
TM6SF1-201ENST00000258909 C4orf3Q8WVX3 66 aa14.83□□□□□ -0.03
TM6SF1-201ENST00000258909 OR5B12Q96R08 314 aa14.83□□□□□ -0.03
TM6SF1-201ENST00000258909 TM2D1Q9BX74 207 aa14.83□□□□□ -0.03
TM6SF1-201ENST00000258909 SCN3BQ9NY72 215 aa14.83□□□□□ -0.03
TM6SF1-201ENST00000258909 STEAP1Q9UHE8 339 aa14.83□□□□□ -0.03
TM6SF1-201ENST00000258909 LRRC42Q9Y546 428 aa14.83□□□□□ -0.03
TM6SF1-201ENST00000258909 IGHV7-81A0A0B4J1V7 117 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 TMEM14DPA8MWL7 114 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 NBR2O15453 112 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 NAPSAO96009 420 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 UCHL1P09936 223 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 PPIFP30405 207 aaKnown RBP14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 IRF3Q14653 427 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 RPL39P5Q59GN2 51 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 LY6G6FQ5SQ64 297 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 OR11H1Q8NG94 326 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 GFI1Q99684 422 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 HDHD3Q9BSH5 251 aaPredicted RBP14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 OR51J1Q9H342 316 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 GNB4Q9HAV0 340 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 PLEKHJ1Q9NW61 149 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 SEC14L6B5MCN3 397 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 SOCS1O15524 211 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 HLA-DRB1P01911 266 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 HSMCR30P0CW71 290 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 OR5H8P0DN80 308 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 AQP4P55087 323 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 C5orf64Q2M2E5 130 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 LIN54Q6MZP7 749 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 ZNF880Q6PDB4 577 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 TMEM65Q6PI78 240 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 FAM131AQ6UXB0 335 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 GLDNQ6ZMI3 551 aaPredicted RBP14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 OR6M1Q8NGM8 313 aa14.82□□□□□ -0.04
TM6SF1-201ENST00000258909 NRG4Q8WWG1 115 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms