RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 CDIP1Q9H305 208 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 OR51I1Q9H343 314 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 PLEKHF2Q9H8W4 249 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 TVP23BQ9NYZ1 205 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 MTFP1Q9UDX5 166 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 NYNRINQ9P2P1 1898 aaKnown RBP6.61□□□□□ -1.35
GPNMB-201ENST00000258733 TRAV9-2A0A087WT02 112 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 FNDC10F2Z333 226 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 SERF1AO75920 110 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 IGHG3P01860 377 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 LINC00869P0C866 280 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 VDAC2P45880 294 aaPredicted RBP6.61□□□□□ -1.35
GPNMB-201ENST00000258733 LINC00310P59036 64 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 KLRD1Q13241 179 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 DIAPH2-AS1Q14236 149 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 CD226Q15762 336 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 ZNF791Q3KP31 576 aaPredicted RBP6.61□□□□□ -1.35
GPNMB-201ENST00000258733 SHISA6Q6ZSJ9 500 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 TMEM173Q86WV6 379 aaPredicted RBP6.61□□□□□ -1.35
GPNMB-201ENST00000258733 OR4N5Q8IXE1 308 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 FGFRL1Q8N441 504 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 ZNF433Q8N7K0 673 aaPredicted RBP6.61□□□□□ -1.35
GPNMB-201ENST00000258733 OSR1Q8TAX0 266 aaPredicted RBP6.61□□□□□ -1.35
GPNMB-201ENST00000258733 SLC25A33Q9BSK2 321 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 VN1R3Q9BXE9 311 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 TMEM133Q9H2Q1 129 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 IL36GQ9NZH8 169 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 TRAPPC1Q9Y5R8 145 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 SOX21Q9Y651 276 aaPredicted RBP6.61□□□□□ -1.35
GPNMB-201ENST00000258733 KCNE3Q9Y6H6 103 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 LOC102723996A0A087X1L8 192 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 OR4C46A6NHA9 309 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 C9JAW5 83 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 H3BRM9 83 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 ISLRO14498 428 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 PPP1R11O60927 126 aaPredicted RBP6.61□□□□□ -1.35
GPNMB-201ENST00000258733 MPIG6BO95866 241 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 CATP04040 527 aaKnown RBP6.61□□□□□ -1.35
GPNMB-201ENST00000258733 GATA2P23769 480 aaPredicted RBP6.61□□□□□ -1.35
GPNMB-201ENST00000258733 NSG1P42857 185 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 CXCL12P48061 93 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 XGP55808 180 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 ALG10Q5BKT4 473 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 GLYATL3Q5SZD4 288 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 LCNL1Q6ZST4 164 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 ZNF683Q8IZ20 524 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 ZNF808Q8N4W9 903 aaPredicted RBP6.61□□□□□ -1.35
GPNMB-201ENST00000258733 NUP43Q8NFH3 380 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 OR13A1Q8NGR1 328 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 OR51E1Q8TCB6 317 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 IRF7Q92985 503 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 COQ2Q96H96 371 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 ZNF488Q96MN9 340 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 NSUN5Q96P11 429 aaKnown RBP6.61□□□□□ -1.35
GPNMB-201ENST00000258733 NDC1Q9BTX1 674 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 FAM234AQ9H0X4 552 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 SDF2L1Q9HCN8 221 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 HIGD1AQ9Y241 93 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 LOC285556D6RIA3 1793 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 MYLKQ15746 1914 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 ARID2Q68CP9 1835 aa6.61□□□□□ -1.35
GPNMB-201ENST00000258733 TSPAN11A1L157 253 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 SDCBPO00560 298 aaPredicted RBP6.6□□□□□ -1.35
GPNMB-201ENST00000258733 TNFSF11O14788 317 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 DNPH1O43598 174 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 SP1P08047 785 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 ZNF93P35789 620 aaPredicted RBP6.6□□□□□ -1.35
GPNMB-201ENST00000258733 VEGFBP49765 207 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 NDUFV3P56181 108 aaKnown RBP6.6□□□□□ -1.35
GPNMB-201ENST00000258733 RBM11P57052 281 aaKnown RBP6.6□□□□□ -1.35
GPNMB-201ENST00000258733 RPS16P62249 146 aaKnown RBP6.6□□□□□ -1.35
GPNMB-201ENST00000258733 SEC11AP67812 179 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 POU3F1Q03052 451 aaPredicted RBP6.6□□□□□ -1.35
GPNMB-201ENST00000258733 MYBPHQ13203 477 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 ICAM4Q14773 271 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 TBC1D28Q2M2D7 210 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 TMEM97Q5BJF2 176 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 SPANXN4Q5MJ08 99 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 STUMQ69YW2 141 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 DNM1P46Q6ZS02 220 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 C16orf82Q7Z2V1 217 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 ZNF761Q86XN6 746 aaPredicted RBP6.6□□□□□ -1.35
GPNMB-201ENST00000258733 ATOH7Q8N100 152 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 RBMXL3Q8N7X1 1067 aaKnown RBP6.6□□□□□ -1.35
GPNMB-201ENST00000258733 OR51T1Q8NGJ9 327 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 OR2T10Q8NGZ9 312 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 ZDHHC16Q969W1 377 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 TP53TG3Q9ULZ0 132 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 TDRD15B5MCY1 1934 aaKnown RBP6.6□□□□□ -1.35
GPNMB-201ENST00000258733 A0A1B0GTL3 188 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 ARRDC5A6NEK1 342 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 SNRNP200O75643 2136 aaKnown RBP6.6□□□□□ -1.35
GPNMB-201ENST00000258733 IFNW1P05000 195 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 DBIP07108 87 aaKnown RBP6.6□□□□□ -1.35
GPNMB-201ENST00000258733 IGLL1P15814 213 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 ZNF415Q09FC8 603 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 ZNF506Q5JVG8 444 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 GLB1LQ6UWU2 654 aa6.6□□□□□ -1.35
GPNMB-201ENST00000258733 PTGR2Q8N8N7 351 aaPredicted RBP6.6□□□□□ -1.35
GPNMB-201ENST00000258733 RTN4IP1Q8WWV3 396 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms