RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 DMRTC2Q8IXT2 367 aaPredicted RBP12.4□□□□□ -0.42
TRAFD1-201ENST00000257604 ZCCHC24Q8N2G6 241 aaKnown RBP12.4□□□□□ -0.42
TRAFD1-201ENST00000257604 OR10V1Q8NGI7 309 aa12.4□□□□□ -0.42
TRAFD1-201ENST00000257604 S100PBPQ96BU1 408 aa12.4□□□□□ -0.42
TRAFD1-201ENST00000257604 SCNM1Q9BWG6 230 aa12.4□□□□□ -0.42
TRAFD1-201ENST00000257604 MPC1Q9Y5U8 109 aa12.4□□□□□ -0.42
TRAFD1-201ENST00000257604 IGKV1-6A0A0C4DH72 117 aa12.4□□□□□ -0.42
TRAFD1-201ENST00000257604 C3orf85A0A1B0GTC6 90 aa12.4□□□□□ -0.42
TRAFD1-201ENST00000257604 RPS16P62249 146 aaKnown RBP12.4□□□□□ -0.42
TRAFD1-201ENST00000257604 PLPPR1Q8TBJ4 325 aa12.4□□□□□ -0.42
TRAFD1-201ENST00000257604 STARD4Q96DR4 205 aa12.4□□□□□ -0.42
TRAFD1-201ENST00000257604 C19orf12Q9NSK7 152 aa12.4□□□□□ -0.42
TRAFD1-201ENST00000257604 METTL1Q9UBP6 276 aaKnown RBP12.4□□□□□ -0.42
TRAFD1-201ENST00000257604 DKK4Q9UBT3 224 aa12.4□□□□□ -0.42
TRAFD1-201ENST00000257604 CXorf65A6NEN9 183 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 TMEM211Q6ICI0 200 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 OR51I2Q9H344 312 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 Q9N2K0 584 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 ANAPC10Q9UM13 185 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 ARFGEF3Q5TH69 2177 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 FAM24AA6NFZ4 105 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 CEACAM18A8MTB9 384 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 AP4M1O00189 453 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 SSSCA1O60232 199 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 CST7O76096 145 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 OR2C1O95371 312 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 IGHV2-70P01814 119 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 COX5BP10606 129 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 S100PP25815 95 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 LINC00205P59089 165 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 ASCL4Q6XD76 172 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 Q6ZSR3 168 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 MRGPRDQ8TDS7 321 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 TECTBQ96PL2 329 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 GGACTQ9BVM4 153 aa12.39□□□□□ -0.43
TRAFD1-201ENST00000257604 MPPED1O15442 326 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 IGHV2-5P01817 119 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 RUNX1Q01196 453 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 PRR30Q53SZ7 412 aaPredicted RBP12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 BHLHA15Q7RTS1 189 aaPredicted RBP12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 UNKLQ9H9P5 680 aaKnown RBP12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 METRNQ9UJH8 293 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 TP53TG5Q9Y2B4 290 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 OR5B21A6NL26 309 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 J3QT63 122 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 MLNRO43193 412 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 ADAM20O43506 726 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 RNF212Q495C1 297 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 WDR31Q8NA23 367 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 OR10D4PQ8NGN7 298 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 SCRT1Q9BWW7 348 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 WRBO00258 174 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 PSPNO60542 156 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 IGHG3P01860 377 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 FAM87AP0C7U9 286 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 DANCRP0C864 163 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 CEACAM6P40199 344 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 TMEM187Q14656 261 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 CXorf66Q5JRM2 361 aaPredicted RBP12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 UNQ6494/PRO21346Q6UXR6 183 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 SEM1Q6ZVN7 128 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 ZNF383Q8NA42 475 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 MOB3AQ96BX8 217 aa12.38□□□□□ -0.43
TRAFD1-201ENST00000257604 TRDCB7Z8K6 153 aa12.37□□□□□ -0.43
TRAFD1-201ENST00000257604 AQP7O14520 342 aa12.37□□□□□ -0.43
TRAFD1-201ENST00000257604 RBMXL2O75526 392 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-201ENST00000257604 TNFSF13O75888 250 aa12.37□□□□□ -0.43
TRAFD1-201ENST00000257604 OR3A1P47881 315 aa12.37□□□□□ -0.43
TRAFD1-201ENST00000257604 BTNL3Q6UXE8 466 aa12.37□□□□□ -0.43
TRAFD1-201ENST00000257604 C22orf34Q6ZV56 151 aa12.37□□□□□ -0.43
TRAFD1-201ENST00000257604 CMTM1Q8IZ96 169 aa12.37□□□□□ -0.43
TRAFD1-201ENST00000257604 MRPL30Q8TCC3 161 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-201ENST00000257604 SERPINE2P07093 398 aa12.37□□□□□ -0.43
TRAFD1-201ENST00000257604 RPS23P62266 143 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-201ENST00000257604 SOHLH1Q5JUK2 328 aa12.37□□□□□ -0.43
TRAFD1-201ENST00000257604 SPNS3Q6ZMD2 512 aa12.37□□□□□ -0.43
TRAFD1-201ENST00000257604 LIAT1Q6ZQX7 453 aa12.37□□□□□ -0.43
TRAFD1-201ENST00000257604 WFDC8Q8IUA0 241 aa12.37□□□□□ -0.43
TRAFD1-201ENST00000257604 LGI3Q8N145 548 aa12.37□□□□□ -0.43
TRAFD1-201ENST00000257604 CCDC71LQ8N9Z2 235 aa12.37□□□□□ -0.43
TRAFD1-201ENST00000257604 EDDM3BP56851 147 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 RAB2AP61019 212 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 SPRNQ5BIV9 151 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 PYY3Q5JQD4 70 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 INO80CQ6PI98 192 aaPredicted RBP12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 UBAC2Q8NBM4 344 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 MUCL1Q96DR8 90 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 TOLLIPQ9H0E2 274 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 IL36GQ9NZH8 169 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 ZDHHC8Q9ULC8 765 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 ANKHD1Q8IWZ3 2542 aaKnown RBP12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 TGIF2-C20orf24A0A0A6YYL0 155 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 BORCS7-ASMTA0A0B4J1R7 106 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 IGHV1-18A0A0C4DH31 117 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 MKRN2OSH3BPM6 223 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 BTF3P20290 206 aaKnown RBP12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 IL2RGP31785 369 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 ZNF718Q3SXZ3 478 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 RBMXL3Q8N7X1 1067 aaKnown RBP12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 OR1L1Q8NH94 360 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms