RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 SMIM9A6NGZ8 99 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 FNDC10F2Z333 226 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 DHHO43323 396 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 SRIP30626 198 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 MRPL55Q7Z7F7 128 aaKnown RBP5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 OR1F12Q8NHA8 337 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 PRR7Q8TB68 274 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 FAM234AQ9H0X4 552 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 ZNF442Q9H7R0 627 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 ZNF703Q9H7S9 590 aaPredicted RBP5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 POLDIP2Q9Y2S7 368 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 FOCADQ5VW36 1801 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 SHISA8B8ZZ34 492 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 C11orf94C9JXX5 98 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 KLK10O43240 276 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 CST7O76096 145 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 KBTBD11O94819 623 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 WIPI1Q5MNZ9 446 aaPredicted RBP5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 TEX43Q6ZNM6 134 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 CHST6Q9GZX3 395 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 OSER1Q9NX31 292 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 NXPH3O95157 252 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 ADRA1AP35348 466 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 RUNX3Q13761 415 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 PRSS57Q6UWY2 283 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 ZNF841Q6ZN19 808 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 SDF2L1Q9HCN8 221 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 NECAP2Q9NVZ3 263 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 TNFRSF18Q9Y5U5 241 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 HS3ST3B1Q9Y662 390 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 IGHV2-26A0A0B4J1V2 119 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 B3GALT2O43825 422 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 GYPBP06028 91 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 RPS21P63220 83 aaKnown RBP5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 ATG4DQ86TL0 474 aaPredicted RBP5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 RNF175Q8N4F7 328 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 TRAV8-1A0A0A6YYK1 113 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 HOXB9P17482 250 aaPredicted RBP5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 EVI2AP22794 236 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 MEF2CQ06413 473 aaPredicted RBP5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 INSL4Q14641 139 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 TNXAQ16473 311 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 TBC1D28Q2M2D7 210 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 LHX8Q68G74 356 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 CYP2G1PQ6ZSU1 146 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 C8orf86Q6ZUL3 223 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 ABHD5Q8WTS1 349 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 PIGTQ969N2 578 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 PGLYRP3Q96LB9 341 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 ATOH8Q96SQ7 321 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 CDX2Q99626 313 aaPredicted RBP5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 CFHR5Q9BXR6 569 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 JPT1Q9UK76 154 aa5.89□□□□□ -1.47
PDGFRA-201ENST00000257290 GREB1LQ9C091 1923 aaPredicted RBP5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 ATAD5Q96QE3 1844 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 C1QL1O75973 258 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 F11P03951 625 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 PVRP15151 417 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 HERVK_113P61574 105 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 EIF4EBP2Q13542 120 aaPredicted RBP5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 SLC22A24Q8N4F4 322 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 TTC9CQ8N5M4 171 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 CLDN19Q8N6F1 224 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 OR9G4Q8NGQ1 327 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 PP6455Q8WZ26 134 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 NUDT22Q9BRQ3 303 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 ABHD14AQ9BUJ0 271 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 SLC25A37Q9NYZ2 338 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 DUSP13Q9UII6 198 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 TRAV14DV4A0A0A6YYC5 116 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 TNFRSF1AP19438 455 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 EIF3IQ13347 325 aaKnown RBP5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 MFAP5Q13361 173 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 BHLHA9Q7RTU4 235 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 SCCPDHQ8NBX0 429 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 OR5P3Q8WZ94 311 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 PKIGQ9Y2B9 76 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 F11RQ9Y624 299 aaKnown RBP5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 SERINC4A6NH21 518 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 IL18BPO95998 194 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 KIR3DS1Q14943 382 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 CALHM3Q86XJ0 350 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 MEX3DQ86XN8 651 aaKnown RBP5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 OR5D13Q8NGL4 314 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 ZG16BQ96DA0 208 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 C20orf173Q96LM9 149 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 ZNF324O75467 553 aaPredicted RBP5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 CTAG2O75638 210 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 IGHA2P01877 340 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 COX6CP09669 75 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 MYBPHQ13203 477 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 GGTLC2Q14390 218 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 C19orf48Q6RUI8 117 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 TMEM25Q86YD3 366 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 OR8A1Q8NGG7 326 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 NDFIP1Q9BT67 221 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 TMEM121BQ9BXQ6 578 aaPredicted RBP5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 TECRQ9NZ01 308 aaKnown RBP5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 OR2W1Q9Y3N9 320 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 RBBP6Q7Z6E9 1792 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms