RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 RCC2Q9P258 522 aaKnown RBP7.54□□□□□ -1.2
PTCD3-201ENST00000254630 ANKRD36A6QL64 1941 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 MMP16P51512 607 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 OR10J6PQ8NGY7 276 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 LPAR5Q9H1C0 372 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 IL36RNQ9UBH0 155 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 RNF115Q9Y4L5 304 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 B4DEV8 164 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 CSN3P07498 182 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 CEBPEQ15744 281 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 BSXQ3C1V8 233 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 CALHM1Q8IU99 346 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 FAM181AQ8N9Y4 354 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 OR10D4PQ8NGN7 298 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 CHODLQ9H9P2 273 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 CEACAM18A8MTB9 384 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 LEUTXA8MZ59 168 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 SMPD2O60906 423 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 FAM87AP0C7U9 286 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 IGSF11Q5DX21 431 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 TPRX1Q8N7U7 411 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 STXBP6Q8NFX7 210 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 RGP1Q92546 391 aaPredicted RBP7.53□□□□□ -1.2
PTCD3-201ENST00000254630 MARS2Q96GW9 593 aaKnown RBP7.53□□□□□ -1.2
PTCD3-201ENST00000254630 C16orf92Q96LL3 132 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 NXF2Q9GZY0 626 aaKnown RBP7.53□□□□□ -1.2
PTCD3-201ENST00000254630 TMEM74BQ9NUR3 256 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 TRPM7Q96QT4 1865 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 BMPR1BO00238 502 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 SLC35E4Q6ICL7 350 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 VWA1Q6PCB0 445 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 TCTEX1D1Q8N7M0 179 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 SYT8Q8NBV8 401 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 OR10C1Q96KK4 312 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 MS4A10Q96PG2 267 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 RBM38Q9H0Z9 239 aaKnown RBP7.53□□□□□ -1.2
PTCD3-201ENST00000254630 GUCA2BQ16661 112 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 AWAT1Q58HT5 328 aa7.53□□□□□ -1.2
PTCD3-201ENST00000254630 IGHV3-72A0A0B4J1Y9 119 aa7.52□□□□□ -1.2
PTCD3-201ENST00000254630 PHOX2AO14813 284 aa7.52□□□□□ -1.2
PTCD3-201ENST00000254630 CDS2O95674 445 aa7.52□□□□□ -1.2
PTCD3-201ENST00000254630 PRSS1P07477 247 aa7.52□□□□□ -1.2
PTCD3-201ENST00000254630 HIST1H1BP16401 226 aaKnown RBP7.52□□□□□ -1.2
PTCD3-201ENST00000254630 CCKARP32238 428 aa7.52□□□□□ -1.2
PTCD3-201ENST00000254630 IL22RA2Q969J5 263 aa7.52□□□□□ -1.2
PTCD3-201ENST00000254630 ABHD14BQ96IU4 210 aa7.52□□□□□ -1.2
PTCD3-201ENST00000254630 HS3ST3B1Q9Y662 390 aa7.52□□□□□ -1.2
PTCD3-201ENST00000254630 LOC105371242A0A075B767 164 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 SS18L1O75177 396 aaPredicted RBP7.52□□□□□ -1.21
PTCD3-201ENST00000254630 HYPMO75409 117 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 IFI6P09912 130 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 MC5RP33032 325 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 PCSK4Q6UW60 755 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 Q6ZN92 141 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 LRP11Q86VZ4 500 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 ZNF738Q8NE65 137 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 OR4C5Q8NGB2 326 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 MYOZ3Q8TDC0 251 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 GPX7Q96SL4 187 aaPredicted RBP7.52□□□□□ -1.21
PTCD3-201ENST00000254630 HSPB8Q9UJY1 196 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 ISLRO14498 428 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 CTSBP07858 339 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 OR2T10Q8NGZ9 312 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 NEURL2Q9BR09 285 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 VPS25Q9BRG1 176 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 ELOA3CA0A087WX78 387 aaPredicted RBP7.52□□□□□ -1.21
PTCD3-201ENST00000254630 LMX1BO60663 402 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 PTBP3O95758 552 aaKnown RBP7.52□□□□□ -1.21
PTCD3-201ENST00000254630 ISG15P05161 165 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 RPL27AP46776 148 aaKnown RBP7.52□□□□□ -1.21
PTCD3-201ENST00000254630 TFPI2P48307 235 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 PSMB2P49721 201 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 ZNF826PQ6ZT77 177 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 SCARF2Q96GP6 870 aaPredicted RBP7.52□□□□□ -1.21
PTCD3-201ENST00000254630 TRBV5-5A0A0J9YX44 114 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 CTXND1A0A1B0GTU2 59 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 ZNF137PP52743 207 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 ATP5G2Q06055 141 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 SMAGPQ0VAQ4 97 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 LYRM7Q5U5X0 104 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 DHRS11Q6UWP2 260 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 PKIBQ9C010 78 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 CBY3A6NI87 242 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 WNT9BO14905 357 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 SCTP09683 121 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 CD1BP29016 333 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 PPOXP50336 477 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 RRN3P1Q2M238 152 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 LDLRAD3Q86YD5 345 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 FAM216AQ8WUB2 273 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 TMEM204Q9BSN7 226 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 LYRM2Q9NU23 88 aaPredicted RBP7.52□□□□□ -1.21
PTCD3-201ENST00000254630 FAM206AQ9NX38 181 aa7.52□□□□□ -1.21
PTCD3-201ENST00000254630 A0A1W2PS18 150 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 SMIM10L1P0DMW3 83 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 PF4V1P10720 104 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 HOXB1P14653 301 aaPredicted RBP7.51□□□□□ -1.21
PTCD3-201ENST00000254630 MMP9P14780 707 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 ROM1Q03395 351 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 C9orf62Q8N4C0 152 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms