RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 RAB32Q13637 225 aa9.72□□□□□ -0.85
LIN28A-201ENST00000254231 FAHD2BQ6P2I3 314 aaPredicted RBP9.72□□□□□ -0.85
LIN28A-201ENST00000254231 LYG2Q86SG7 212 aa9.72□□□□□ -0.85
LIN28A-201ENST00000254231 SPERTQ8NA61 448 aa9.72□□□□□ -0.85
LIN28A-201ENST00000254231 PPP1R35Q8TAP8 253 aa9.72□□□□□ -0.85
LIN28A-201ENST00000254231 MRPS24Q96EL2 167 aaKnown RBP9.72□□□□□ -0.85
LIN28A-201ENST00000254231 FAHD2AQ96GK7 314 aa9.72□□□□□ -0.85
LIN28A-201ENST00000254231 C7orf50Q9BRJ6 194 aaKnown RBP9.72□□□□□ -0.85
LIN28A-201ENST00000254231 RTBDNQ9BSG5 229 aaPredicted RBP9.72□□□□□ -0.85
LIN28A-201ENST00000254231 TM2D1Q9BX74 207 aa9.72□□□□□ -0.85
LIN28A-201ENST00000254231 C19orf12Q9NSK7 152 aa9.72□□□□□ -0.85
LIN28A-201ENST00000254231 NBEAL1Q6ZS30 2694 aa9.71□□□□□ -0.85
LIN28A-201ENST00000254231 DVL1O14640 695 aa9.71□□□□□ -0.85
LIN28A-201ENST00000254231 G6PCP35575 357 aa9.71□□□□□ -0.85
LIN28A-201ENST00000254231 ATP5J2P56134 94 aa9.71□□□□□ -0.85
LIN28A-201ENST00000254231 OR2B8PP59922 312 aa9.71□□□□□ -0.85
LIN28A-201ENST00000254231 ARL6IP1Q15041 203 aa9.71□□□□□ -0.85
LIN28A-201ENST00000254231 NCMAPQ5T1S8 102 aa9.71□□□□□ -0.85
LIN28A-201ENST00000254231 CDH26Q8IXH8 852 aa9.71□□□□□ -0.85
LIN28A-201ENST00000254231 SSC4DQ8WTU2 575 aa9.71□□□□□ -0.85
LIN28A-201ENST00000254231 CMTM3Q96MX0 182 aa9.71□□□□□ -0.85
LIN28A-201ENST00000254231 DLL4Q9NR61 685 aa9.71□□□□□ -0.85
LIN28A-201ENST00000254231 RASL12Q9NYN1 266 aa9.71□□□□□ -0.85
LIN28A-201ENST00000254231 GPR12P47775 334 aa9.71□□□□□ -0.86
LIN28A-201ENST00000254231 AKR1C1Q04828 323 aa9.71□□□□□ -0.86
LIN28A-201ENST00000254231 OR1S1Q8NH92 325 aa9.71□□□□□ -0.86
LIN28A-201ENST00000254231 ITLN2Q8WWU7 325 aaPredicted RBP9.71□□□□□ -0.86
LIN28A-201ENST00000254231 PTX4Q96A99 478 aa9.71□□□□□ -0.86
LIN28A-201ENST00000254231 MS4A7Q9GZW8 240 aaPredicted RBP9.71□□□□□ -0.86
LIN28A-201ENST00000254231 TRGV10A0A0A0MS01 117 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 SMCO3A2RU48 225 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.7□□□□□ -0.86
LIN28A-201ENST00000254231 SLC31A2O15432 143 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 S100GP29377 79 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 ZNF273Q14593 569 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 MPV17LQ2QL34 196 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 ZNF672Q499Z4 452 aaPredicted RBP9.7□□□□□ -0.86
LIN28A-201ENST00000254231 Q6P435 159 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 INO80EQ8NBZ0 244 aaPredicted RBP9.7□□□□□ -0.86
LIN28A-201ENST00000254231 PFDN2Q9UHV9 154 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 OOEPA6NGQ2 149 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 SH2D7A6NKC9 451 aaPredicted RBP9.7□□□□□ -0.86
LIN28A-201ENST00000254231 SSSCA1O60232 199 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 GLAP06280 429 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 POLR2GP62487 172 aaKnown RBP eCLIP9.7□□□□□ -0.86
LIN28A-201ENST00000254231 KRTAP27-1Q3LI81 207 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 ZNF626Q68DY1 528 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 ARRDC1Q8N5I2 433 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 OR10X1Q8NGY0 326 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 TMEM230Q96A57 120 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 TUBD1Q9UJT1 453 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 GPR132Q9UNW8 380 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 MXRA5Q9NR99 2828 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 RAMP3O60896 148 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 C1QL1O75973 258 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 CFDP00746 253 aaPredicted RBP9.7□□□□□ -0.86
LIN28A-201ENST00000254231 DAOP14920 347 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 KITLGP21583 273 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 KLRD1Q13241 179 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 C9orf152Q5JTZ5 239 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 GGNBP1Q5YKI7 109 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 HIST2H2BDQ6DRA6 164 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 SPAG16Q8N0X2 631 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 SLC35G3Q8N808 338 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 POC1AQ8NBT0 407 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 CLN8Q9UBY8 286 aa9.7□□□□□ -0.86
LIN28A-201ENST00000254231 IFNA17P01571 189 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 SCAND1P57086 179 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 HLA-DRB3P79483 266 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 DAZAP2Q15038 168 aaPredicted RBP9.69□□□□□ -0.86
LIN28A-201ENST00000254231 PLGLAQ15195 96 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 OR8G2PQ6IF36 304 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 Q8IYB0 196 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 C1orf87Q8N0U7 546 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 OR52M1Q8NGK5 317 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 PKIBQ9C010 78 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 SSUH2Q9Y2M2 353 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 S4R3C0 116 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 C3orf85A0A1B0GTC6 90 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 NKX6-3A6NJ46 265 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 MYOD1P15172 320 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 CXorf66Q5JRM2 361 aaPredicted RBP9.69□□□□□ -0.86
LIN28A-201ENST00000254231 SHEQ5VZ18 495 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 MBNL2Q5VZF2 373 aaKnown RBP9.69□□□□□ -0.86
LIN28A-201ENST00000254231 SLC36A1Q7Z2H8 476 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 TCTE3Q8IZS6 198 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 SCGB3A2Q96PL1 93 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 TRAV38-1A0A0B4J264 116 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 LEUTXA8MZ59 168 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 CLDN1O95832 211 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 NUP62P37198 522 aaPredicted RBP9.69□□□□□ -0.86
LIN28A-201ENST00000254231 BTG1P62324 171 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 MZT1Q08AG7 82 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 OPCMLQ14982 345 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 LRRC10Q5BKY1 277 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 ZBTB37Q5TC79 503 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 TEX261Q6UWH6 196 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 HSD17B11Q8NBQ5 300 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 CCDC54Q8NEL0 328 aa9.69□□□□□ -0.86
LIN28A-201ENST00000254231 RAB1BQ9H0U4 201 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms