RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 S100A14Q9HCY8 104 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 RAB9BQ9NP90 201 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 ETAA1Q9NY74 926 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 GNG12Q9UBI6 72 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 CLEC2DQ9UHP7 191 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 MRPS28Q9Y2Q9 187 aaKnown RBP8.02□□□□□ -1.13
VPS50-201ENST00000251739 EXOSC1Q9Y3B2 195 aaKnown RBP8.02□□□□□ -1.13
VPS50-201ENST00000251739 STARD9Q9P2P6 4700 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 DNAH1Q9P2D7 4330 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 ERICH4A6NGS2 130 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 MCRIP1C9JLW8 97 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 OR5H8P0DN80 308 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 MGMTP16455 207 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 GNMTQ14749 295 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 MORN2Q502X0 79 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 LY6G6FQ5SQ64 297 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 GLIPR1L1Q6UWM5 242 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 WFDC3Q8IUB2 231 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 C10orf67Q8IYJ2 551 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 ZNF491Q8N8L2 437 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 OR10V1Q8NGI7 309 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 OR4K15Q8NH41 348 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 RNF141Q8WVD5 230 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 MUL1Q969V5 352 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 OR14A2Q96R54 314 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 KLK15Q9H2R5 256 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 GNB4Q9HAV0 340 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 TAF9BQ9HBM6 251 aa8.01□□□□□ -1.13
VPS50-201ENST00000251739 SMPD3Q9NY59 655 aaPredicted RBP8.01□□□□□ -1.13
VPS50-201ENST00000251739 ZNF107Q9UII5 783 aaPredicted RBP8.01□□□□□ -1.13
VPS50-201ENST00000251739 ZNF256Q9Y2P7 627 aaPredicted RBP8.01□□□□□ -1.13
VPS50-201ENST00000251739 IGHV7-81A0A0B4J1V7 117 aa8□□□□□ -1.13
VPS50-201ENST00000251739 IRGMA1A4Y4 181 aa8□□□□□ -1.13
VPS50-201ENST00000251739 G3V318 75 aa8□□□□□ -1.13
VPS50-201ENST00000251739 ATP6V0E1O15342 81 aa8□□□□□ -1.13
VPS50-201ENST00000251739 SLC2A2P11168 524 aaPredicted RBP8□□□□□ -1.13
VPS50-201ENST00000251739 MYL12AP19105 171 aa8□□□□□ -1.13
VPS50-201ENST00000251739 FUT3P21217 361 aa8□□□□□ -1.13
VPS50-201ENST00000251739 CHATP28329 748 aa8□□□□□ -1.13
VPS50-201ENST00000251739 ECI1P42126 302 aa8□□□□□ -1.13
VPS50-201ENST00000251739 INSL3P51460 131 aa8□□□□□ -1.13
VPS50-201ENST00000251739 CRIP2P52943 208 aaPredicted RBP8□□□□□ -1.13
VPS50-201ENST00000251739 ACTBP60709 375 aa8□□□□□ -1.13
VPS50-201ENST00000251739 HTD2P86397 168 aa8□□□□□ -1.13
VPS50-201ENST00000251739 NDPQ00604 133 aa8□□□□□ -1.13
VPS50-201ENST00000251739 MMDQ15546 238 aa8□□□□□ -1.13
VPS50-201ENST00000251739 ZNF833PQ6ZTB9 187 aa8□□□□□ -1.13
VPS50-201ENST00000251739 C5orf24Q7Z6I8 188 aa8□□□□□ -1.13
VPS50-201ENST00000251739 JAGN1Q8N5M9 183 aa8□□□□□ -1.13
VPS50-201ENST00000251739 ZFP41Q8N8Y5 198 aa8□□□□□ -1.13
VPS50-201ENST00000251739 MINDY2Q8NBR6 621 aa8□□□□□ -1.13
VPS50-201ENST00000251739 OR11H1Q8NG94 326 aa8□□□□□ -1.13
VPS50-201ENST00000251739 MRPL30Q8TCC3 161 aaKnown RBP8□□□□□ -1.13
VPS50-201ENST00000251739 RITA1Q96K30 269 aa8□□□□□ -1.13
VPS50-201ENST00000251739 DERL3Q96Q80 235 aa8□□□□□ -1.13
VPS50-201ENST00000251739 NABP2Q9BQ15 211 aa8□□□□□ -1.13
VPS50-201ENST00000251739 ABHD14AQ9BUJ0 271 aa8□□□□□ -1.13
VPS50-201ENST00000251739 MRPL20Q9BYC9 149 aaKnown RBP8□□□□□ -1.13
VPS50-201ENST00000251739 OR51J1Q9H342 316 aa8□□□□□ -1.13
VPS50-201ENST00000251739 CKLFQ9UBR5 152 aa8□□□□□ -1.13
VPS50-201ENST00000251739 JPT1Q9UK76 154 aa8□□□□□ -1.13
VPS50-201ENST00000251739 TRAPPC2LQ9UL33 140 aa8□□□□□ -1.13
VPS50-201ENST00000251739 RRP15Q9Y3B9 282 aaKnown RBP8□□□□□ -1.13
VPS50-201ENST00000251739 PEX16Q9Y5Y5 336 aa8□□□□□ -1.13
VPS50-201ENST00000251739 TNCP24821 2201 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 NBR2O15453 112 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 SOX15O60248 233 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 PDCD6O75340 191 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 NDUFA3O95167 84 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 CD1AP06126 327 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 OR8U8P0C7N1 319 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 MYF6P23409 242 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 CNTFRP26992 372 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 BLVRBP30043 206 aaPredicted RBP7.99□□□□□ -1.13
VPS50-201ENST00000251739 PPP1CCP36873 323 aaKnown RBP7.99□□□□□ -1.13
VPS50-201ENST00000251739 GNB1P62873 340 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 ZNF616Q08AN1 781 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 C5orf64Q2M2E5 130 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 ZNF260Q3ZCT1 412 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 LAIR2Q6ISS4 152 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 PRR18Q8N4B5 295 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 NPBQ8NG41 125 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 ZNF251Q9BRH9 671 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 UQCC2Q9BRT2 126 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 SELENOIQ9C0D9 397 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 IFI27L2Q9H2X8 130 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 BANF2Q9H503 90 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 OR2S2Q9NQN1 319 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 CHCHD3Q9NX63 227 aaKnown RBP7.99□□□□□ -1.13
VPS50-201ENST00000251739 VSIG4Q9Y279 399 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 FBXO7Q9Y3I1 522 aa7.99□□□□□ -1.13
VPS50-201ENST00000251739 SAA2-SAA4A0A096LPE2 208 aa7.98□□□□□ -1.13
VPS50-201ENST00000251739 TRAV41A0A0B4J266 112 aa7.98□□□□□ -1.13
VPS50-201ENST00000251739 A0A1W2PPK0 400 aa7.98□□□□□ -1.13
VPS50-201ENST00000251739 UBE2QL1A1L167 161 aa7.98□□□□□ -1.13
VPS50-201ENST00000251739 C3orf84H3BNL1 204 aa7.98□□□□□ -1.13
VPS50-201ENST00000251739 YPEL1O60688 119 aa7.98□□□□□ -1.13
VPS50-201ENST00000251739 SAA2P0DJI9 122 aaPredicted RBP7.98□□□□□ -1.13
VPS50-201ENST00000251739 ATF4P18848 351 aaPredicted RBP7.98□□□□□ -1.13
VPS50-201ENST00000251739 OR3A3P47888 321 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms