RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 VAMP2P63027 116 aa19.14■□□□□ 0.65
HOXD9-201ENST00000249499 BLOC1S1P78537 153 aa19.14■□□□□ 0.65
HOXD9-201ENST00000249499 EWSR1Q01844 656 aaKnown RBP eCLIP19.14■□□□□ 0.65
HOXD9-201ENST00000249499 IL34Q6ZMJ4 242 aa19.14■□□□□ 0.65
HOXD9-201ENST00000249499 MRGPRDQ8TDS7 321 aa19.14■□□□□ 0.65
HOXD9-201ENST00000249499 GINS3Q9BRX5 216 aa19.14■□□□□ 0.65
HOXD9-201ENST00000249499 MMP26Q9NRE1 261 aa19.14■□□□□ 0.65
HOXD9-201ENST00000249499 ARID1AO14497 2285 aa19.14■□□□□ 0.65
HOXD9-201ENST00000249499 ZNF705EA8MWA4 302 aaPredicted RBP19.14■□□□□ 0.65
HOXD9-201ENST00000249499 BAXQ07812 192 aa19.14■□□□□ 0.65
HOXD9-201ENST00000249499 CXorf66Q5JRM2 361 aaPredicted RBP19.14■□□□□ 0.65
HOXD9-201ENST00000249499 C22orf34Q6ZV56 151 aa19.14■□□□□ 0.65
HOXD9-201ENST00000249499 MOGAT3Q86VF5 341 aa19.14■□□□□ 0.65
HOXD9-201ENST00000249499 FAM222BQ8WU58 562 aa19.14■□□□□ 0.65
HOXD9-201ENST00000249499 ITLN1Q8WWA0 313 aa19.14■□□□□ 0.65
HOXD9-201ENST00000249499 GPR146Q96CH1 333 aa19.14■□□□□ 0.65
HOXD9-201ENST00000249499 PARP12Q9H0J9 701 aaKnown RBP19.14■□□□□ 0.65
HOXD9-201ENST00000249499 KMT2BQ9UMN6 2715 aaPredicted RBP19.13■□□□□ 0.65
HOXD9-201ENST00000249499 SPRY3O43610 288 aa19.13■□□□□ 0.65
HOXD9-201ENST00000249499 OR13A1Q8NGR1 328 aa19.13■□□□□ 0.65
HOXD9-201ENST00000249499 UBALD1Q8TB05 177 aa19.13■□□□□ 0.65
HOXD9-201ENST00000249499 Q8TCH9 128 aa19.13■□□□□ 0.65
HOXD9-201ENST00000249499 SMIM3Q9BZL3 60 aa19.13■□□□□ 0.65
HOXD9-201ENST00000249499 PRR14LQ5THK1 2151 aa19.13■□□□□ 0.65
HOXD9-201ENST00000249499 C15orf65H3BRN8 121 aa19.12■□□□□ 0.65
HOXD9-201ENST00000249499 WRBO00258 174 aa19.12■□□□□ 0.65
HOXD9-201ENST00000249499 SSSCA1O60232 199 aa19.12■□□□□ 0.65
HOXD9-201ENST00000249499 EIF4EBP1Q13541 118 aaPredicted RBP19.12■□□□□ 0.65
HOXD9-201ENST00000249499 TUSC1Q2TAM9 212 aa19.12■□□□□ 0.65
HOXD9-201ENST00000249499 ZNF585BQ52M93 769 aa19.12■□□□□ 0.65
HOXD9-201ENST00000249499 SUN5Q8TC36 379 aa19.12■□□□□ 0.65
HOXD9-201ENST00000249499 DIRC2Q96SL1 478 aa19.12■□□□□ 0.65
HOXD9-201ENST00000249499 RNF115Q9Y4L5 304 aa19.12■□□□□ 0.65
HOXD9-201ENST00000249499 CACNA1BQ00975 2339 aa19.12■□□□□ 0.65
HOXD9-201ENST00000249499 LGALS8O00214 317 aa19.11■□□□□ 0.65
HOXD9-201ENST00000249499 IGKV1-39P01597 117 aa19.11■□□□□ 0.65
HOXD9-201ENST00000249499 IGKV1D-39P04432 117 aa19.11■□□□□ 0.65
HOXD9-201ENST00000249499 TNFAIP6P98066 277 aaPredicted RBP19.11■□□□□ 0.65
HOXD9-201ENST00000249499 HOXA4Q00056 320 aaPredicted RBP19.11■□□□□ 0.65
HOXD9-201ENST00000249499 CATR1Q13166 79 aa19.11■□□□□ 0.65
HOXD9-201ENST00000249499 ZNF266Q14584 549 aa19.11■□□□□ 0.65
HOXD9-201ENST00000249499 OR52L2PQ8NGH6 319 aa19.11■□□□□ 0.65
HOXD9-201ENST00000249499 RNASE11Q8TAA1 199 aaKnown RBP19.11■□□□□ 0.65
HOXD9-201ENST00000249499 RAB40CQ96S21 281 aa19.11■□□□□ 0.65
HOXD9-201ENST00000249499 OR2D2Q9H210 308 aa19.11■□□□□ 0.65
HOXD9-201ENST00000249499 PARP11Q9NR21 331 aa19.11■□□□□ 0.65
HOXD9-201ENST00000249499 RNF7Q9UBF6 113 aa19.11■□□□□ 0.65
HOXD9-201ENST00000249499 ODAMA1E959 279 aa19.11■□□□□ 0.65
HOXD9-201ENST00000249499 K7N7A8 449 aa19.11■□□□□ 0.65
HOXD9-201ENST00000249499 IGHV1-46P01743 117 aa19.11■□□□□ 0.65
HOXD9-201ENST00000249499 CAV2P51636 162 aa19.11■□□□□ 0.65
HOXD9-201ENST00000249499 NHLH2Q02577 135 aa19.11■□□□□ 0.65
HOXD9-201ENST00000249499 TMEM252Q8N6L7 170 aa19.11■□□□□ 0.65
HOXD9-201ENST00000249499 WFDC1Q9HC57 220 aa19.11■□□□□ 0.65
HOXD9-201ENST00000249499 RAB9BQ9NP90 201 aa19.11■□□□□ 0.65
HOXD9-201ENST00000249499 COA4Q9NYJ1 87 aa19.11■□□□□ 0.65
HOXD9-201ENST00000249499 A0A0G2JRQ6 117 aa19.1■□□□□ 0.65
HOXD9-201ENST00000249499 B8ZZF3 427 aa19.1■□□□□ 0.65
HOXD9-201ENST00000249499 ATG12O94817 140 aa19.1■□□□□ 0.65
HOXD9-201ENST00000249499 SPP1P10451 314 aa19.1■□□□□ 0.65
HOXD9-201ENST00000249499 RAB5CP51148 216 aa19.1■□□□□ 0.65
HOXD9-201ENST00000249499 MST1LQ2TV78 715 aa19.1■□□□□ 0.65
HOXD9-201ENST00000249499 ZNF561Q8N587 486 aa19.1■□□□□ 0.65
HOXD9-201ENST00000249499 EDARADDQ8WWZ3 215 aa19.1■□□□□ 0.65
HOXD9-201ENST00000249499 BSCL2Q96G97 398 aaPredicted RBP19.1■□□□□ 0.65
HOXD9-201ENST00000249499 VKORC1Q9BQB6 163 aa19.1■□□□□ 0.65
HOXD9-201ENST00000249499 JPT1Q9UK76 154 aa19.1■□□□□ 0.65
HOXD9-201ENST00000249499 CHD3Q12873 2000 aaKnown RBP19.1■□□□□ 0.65
HOXD9-201ENST00000249499 FAM24AA6NFZ4 105 aa19.09■□□□□ 0.65
HOXD9-201ENST00000249499 AKR1C2P52895 323 aa19.09■□□□□ 0.65
HOXD9-201ENST00000249499 ZNF66Q6ZN08 573 aa19.09■□□□□ 0.65
HOXD9-201ENST00000249499 RND1Q92730 232 aa19.09■□□□□ 0.65
HOXD9-201ENST00000249499 GCM1Q9NP62 436 aa19.09■□□□□ 0.65
HOXD9-201ENST00000249499 IGSF23A1L1A6 192 aa19.09■□□□□ 0.65
HOXD9-201ENST00000249499 KIAA1324LA8MWY0 1029 aaPredicted RBP19.09■□□□□ 0.65
HOXD9-201ENST00000249499 FAM90A26D6RGX4 464 aa19.09■□□□□ 0.65
HOXD9-201ENST00000249499 MED6O75586 246 aa19.09■□□□□ 0.65
HOXD9-201ENST00000249499 TFF1P04155 84 aa19.09■□□□□ 0.65
HOXD9-201ENST00000249499 SSTR5P35346 364 aa19.09■□□□□ 0.65
HOXD9-201ENST00000249499 PJVKQ0ZLH3 352 aa19.09■□□□□ 0.65
HOXD9-201ENST00000249499 PXDC1Q5TGL8 231 aa19.09■□□□□ 0.65
HOXD9-201ENST00000249499 SPENQ96T58 3664 aaKnown RBP19.08■□□□□ 0.65
HOXD9-201ENST00000249499 CHST1O43916 411 aa19.08■□□□□ 0.65
HOXD9-201ENST00000249499 FBXO24O75426 580 aa19.08■□□□□ 0.65
HOXD9-201ENST00000249499 IGKV1-5P01602 117 aa19.08■□□□□ 0.65
HOXD9-201ENST00000249499 CD55P08174 381 aa19.08■□□□□ 0.65
HOXD9-201ENST00000249499 SPRNQ5BIV9 151 aa19.08■□□□□ 0.65
HOXD9-201ENST00000249499 SDSLQ96GA7 329 aa19.08■□□□□ 0.65
HOXD9-201ENST00000249499 MAGT1Q9H0U3 335 aa19.08■□□□□ 0.65
HOXD9-201ENST00000249499 NGBQ9NPG2 151 aa19.08■□□□□ 0.65
HOXD9-201ENST00000249499 OR6C3Q9NZP0 311 aa19.08■□□□□ 0.65
HOXD9-201ENST00000249499 WSB1Q9Y6I7 421 aa19.08■□□□□ 0.65
HOXD9-201ENST00000249499 DPRXA6NFQ7 191 aa19.07■□□□□ 0.64
HOXD9-201ENST00000249499 SCO1O75880 301 aa19.07■□□□□ 0.64
HOXD9-201ENST00000249499 THBDP07204 575 aa19.07■□□□□ 0.64
HOXD9-201ENST00000249499 FAM87AP0C7U9 286 aa19.07■□□□□ 0.64
HOXD9-201ENST00000249499 ZNF16P17020 682 aaPredicted RBP19.07■□□□□ 0.64
HOXD9-201ENST00000249499 PPP1CCP36873 323 aaKnown RBP19.07■□□□□ 0.64
HOXD9-201ENST00000249499 F2RL1P55085 397 aa19.07■□□□□ 0.64
HOXD9-201ENST00000249499 RPL23AP62750 156 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms