RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 LINC00311Q8N616 119 aa10.63□□□□□ -0.71
LSM8-201ENST00000249299 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.63□□□□□ -0.71
LSM8-201ENST00000249299 OR2AK2Q8NG84 335 aa10.63□□□□□ -0.71
LSM8-201ENST00000249299 OR10V1Q8NGI7 309 aa10.63□□□□□ -0.71
LSM8-201ENST00000249299 RFESDQ8TAC1 157 aa10.63□□□□□ -0.71
LSM8-201ENST00000249299 ZNF596Q8TC21 504 aa10.63□□□□□ -0.71
LSM8-201ENST00000249299 RSRP1Q9BUV0 290 aa10.63□□□□□ -0.71
LSM8-201ENST00000249299 OR1A1Q9P1Q5 309 aa10.63□□□□□ -0.71
LSM8-201ENST00000249299 C14orf166Q9Y224 244 aaKnown RBP10.63□□□□□ -0.71
LSM8-201ENST00000249299 SESN1Q9Y6P5 492 aa10.63□□□□□ -0.71
LSM8-201ENST00000249299 A0A096LNT2 108 aa10.62□□□□□ -0.71
LSM8-201ENST00000249299 IGHV2-70DA0A0C4DH43 119 aa10.62□□□□□ -0.71
LSM8-201ENST00000249299 B4DSR2 109 aa10.62□□□□□ -0.71
LSM8-201ENST00000249299 C22orf46C9J442 243 aa10.62□□□□□ -0.71
LSM8-201ENST00000249299 PHF1O43189 567 aaPredicted RBP10.62□□□□□ -0.71
LSM8-201ENST00000249299 PRTN3P24158 256 aa10.62□□□□□ -0.71
LSM8-201ENST00000249299 ERVFRD-1P60508 538 aa10.62□□□□□ -0.71
LSM8-201ENST00000249299 Q5PR19 223 aa10.62□□□□□ -0.71
LSM8-201ENST00000249299 METTL11BQ5VVY1 283 aa10.62□□□□□ -0.71
LSM8-201ENST00000249299 HIST2H2BCQ6DN03 193 aa10.62□□□□□ -0.71
LSM8-201ENST00000249299 BTNL3Q6UXE8 466 aa10.62□□□□□ -0.71
LSM8-201ENST00000249299 KCTD9Q7L273 389 aa10.62□□□□□ -0.71
LSM8-201ENST00000249299 BVESQ8NE79 360 aa10.62□□□□□ -0.71
LSM8-201ENST00000249299 OR52L2PQ8NGH6 319 aa10.62□□□□□ -0.71
LSM8-201ENST00000249299 MARCH1Q8TCQ1 289 aa10.62□□□□□ -0.71
LSM8-201ENST00000249299 AGMATQ9BSE5 352 aa10.62□□□□□ -0.71
LSM8-201ENST00000249299 NARFLQ9H6Q4 476 aa10.62□□□□□ -0.71
LSM8-201ENST00000249299 METTL8Q9H825 291 aaKnown RBP10.62□□□□□ -0.71
LSM8-201ENST00000249299 C7orf66A4D0T2 115 aa10.61□□□□□ -0.71
LSM8-201ENST00000249299 SNRPGP15A8MWD9 76 aa10.61□□□□□ -0.71
LSM8-201ENST00000249299 GPR31O00270 319 aa10.61□□□□□ -0.71
LSM8-201ENST00000249299 ARPC1BO15143 372 aaKnown RBP10.61□□□□□ -0.71
LSM8-201ENST00000249299 PGAM2P15259 253 aa10.61□□□□□ -0.71
LSM8-201ENST00000249299 SPNP16150 400 aa10.61□□□□□ -0.71
LSM8-201ENST00000249299 CCL3L1P16619 93 aa10.61□□□□□ -0.71
LSM8-201ENST00000249299 ZFP36P26651 326 aaKnown RBP10.61□□□□□ -0.71
LSM8-201ENST00000249299 GNRHRP30968 328 aa10.61□□□□□ -0.71
LSM8-201ENST00000249299 DHODHQ02127 395 aa10.61□□□□□ -0.71
LSM8-201ENST00000249299 SLC25A48Q6ZT89 311 aaKnown RBP10.61□□□□□ -0.71
LSM8-201ENST00000249299 ZNF645Q8N7E2 425 aa10.61□□□□□ -0.71
LSM8-201ENST00000249299 CCDC71LQ8N9Z2 235 aa10.61□□□□□ -0.71
LSM8-201ENST00000249299 ZNF439Q8NDP4 499 aa10.61□□□□□ -0.71
LSM8-201ENST00000249299 RTBDNQ9BSG5 229 aaPredicted RBP10.61□□□□□ -0.71
LSM8-201ENST00000249299 SLC5A7Q9GZV3 580 aa10.61□□□□□ -0.71
LSM8-201ENST00000249299 FXYD6Q9H0Q3 95 aa10.61□□□□□ -0.71
LSM8-201ENST00000249299 MMP28Q9H239 520 aa10.61□□□□□ -0.71
LSM8-201ENST00000249299 TMEM133Q9H2Q1 129 aa10.61□□□□□ -0.71
LSM8-201ENST00000249299 C5orf66Q9H5L9 145 aa10.61□□□□□ -0.71
LSM8-201ENST00000249299 HEXA-AS1Q9H8Q6 139 aa10.61□□□□□ -0.71
LSM8-201ENST00000249299 GPN1Q9HCN4 374 aaPredicted RBP10.61□□□□□ -0.71
LSM8-201ENST00000249299 PIPOXQ9P0Z9 390 aa10.61□□□□□ -0.71
LSM8-201ENST00000249299 VSIG4Q9Y279 399 aa10.61□□□□□ -0.71
LSM8-201ENST00000249299 POLQO75417 2590 aa10.61□□□□□ -0.71
LSM8-201ENST00000249299 ANKRD17O75179 2603 aaKnown RBP10.61□□□□□ -0.71
LSM8-201ENST00000249299 TRAV6A0A075B6T7 132 aa10.6□□□□□ -0.71
LSM8-201ENST00000249299 RLN1P04808 185 aa10.6□□□□□ -0.71
LSM8-201ENST00000249299 PPP1CCP36873 323 aaKnown RBP10.6□□□□□ -0.71
LSM8-201ENST00000249299 TATDN3Q17R31 274 aa10.6□□□□□ -0.71
LSM8-201ENST00000249299 ABCA11PQ4W5N1 156 aa10.6□□□□□ -0.71
LSM8-201ENST00000249299 NCR3LG1Q68D85 454 aa10.6□□□□□ -0.71
LSM8-201ENST00000249299 FAM71F2Q6NXP2 309 aa10.6□□□□□ -0.71
LSM8-201ENST00000249299 GLDNQ6ZMI3 551 aaPredicted RBP10.6□□□□□ -0.71
LSM8-201ENST00000249299 LDLRAD3Q86YD5 345 aa10.6□□□□□ -0.71
LSM8-201ENST00000249299 TCTEX1D1Q8N7M0 179 aa10.6□□□□□ -0.71
LSM8-201ENST00000249299 OR9G1Q8NH87 305 aa10.6□□□□□ -0.71
LSM8-201ENST00000249299 TOMM40LQ969M1 308 aa10.6□□□□□ -0.71
LSM8-201ENST00000249299 ABHD14AQ9BUJ0 271 aa10.6□□□□□ -0.71
LSM8-201ENST00000249299 TMPRSS13Q9BYE2 586 aa10.6□□□□□ -0.71
LSM8-201ENST00000249299 REG4Q9BYZ8 158 aa10.6□□□□□ -0.71
LSM8-201ENST00000249299 FAM212BQ9NTI7 297 aaPredicted RBP10.6□□□□□ -0.71
LSM8-201ENST00000249299 RBM7Q9Y580 266 aaKnown RBP10.6□□□□□ -0.71
LSM8-201ENST00000249299 HECTD1Q9ULT8 2610 aa10.6□□□□□ -0.71
LSM8-201ENST00000249299 TRAV20A0A0B4J274 112 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 IGKV1D-13A0A0B4J2D9 117 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 RNF212BA8MTL3 300 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 RAB29O14966 203 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 MSMBP08118 114 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 OR4E1P0C645 316 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 OR8U9P0C7N5 309 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 IGKV1-13P0DP09 117 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 OMGP23515 440 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 ZNF137PP52743 207 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 PRRX1P54821 245 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 FXYD4P59646 89 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 GNMTQ14749 295 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 PRAMEF5Q5TYX0 476 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 ZNF66Q6ZN08 573 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 C5orf24Q7Z6I8 188 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 GLCCI1Q86VQ1 547 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 KRTAP1-3Q8IUG1 177 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 BEND2Q8NDZ0 799 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 OR13D1Q8NGV5 346 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 OR8U1Q8NH10 309 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 SECTM1Q8WVN6 248 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 GALNT14Q96FL9 552 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 SLC2A9Q9NRM0 540 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 ZNF221Q9UK13 617 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 FLVCR2Q9UPI3 526 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 PSG11Q9UQ72 335 aa10.59□□□□□ -0.71
LSM8-201ENST00000249299 KCNIP3Q9Y2W7 256 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms