RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 CCR9P51686 369 aa9.51□□□□□ -0.89
RFPL3-201ENST00000249007 PSMA6P60900 246 aaKnown RBP9.51□□□□□ -0.89
RFPL3-201ENST00000249007 RPL23AP62750 156 aaKnown RBP9.51□□□□□ -0.89
RFPL3-201ENST00000249007 PTGES3Q15185 160 aaKnown RBP9.51□□□□□ -0.89
RFPL3-201ENST00000249007 OR2W3Q7Z3T1 314 aa9.51□□□□□ -0.89
RFPL3-201ENST00000249007 PRR18Q8N4B5 295 aa9.51□□□□□ -0.89
RFPL3-201ENST00000249007 LINC00471Q8N535 108 aa9.51□□□□□ -0.89
RFPL3-201ENST00000249007 TMEM185AQ8NFB2 350 aa9.51□□□□□ -0.89
RFPL3-201ENST00000249007 RRNAD1Q96FB5 475 aaKnown RBP9.51□□□□□ -0.89
RFPL3-201ENST00000249007 ZNF799Q96GE5 643 aa9.51□□□□□ -0.89
RFPL3-201ENST00000249007 S100A13Q99584 98 aa9.51□□□□□ -0.89
RFPL3-201ENST00000249007 C20orf85Q9H1P6 137 aa9.51□□□□□ -0.89
RFPL3-201ENST00000249007 NMNAT1Q9HAN9 279 aaPredicted RBP9.51□□□□□ -0.89
RFPL3-201ENST00000249007 KRCC1Q9NPI7 259 aaPredicted RBP9.51□□□□□ -0.89
RFPL3-201ENST00000249007 ZNF256Q9Y2P7 627 aaPredicted RBP9.51□□□□□ -0.89
RFPL3-201ENST00000249007 TBL2Q9Y4P3 447 aaKnown RBP9.51□□□□□ -0.89
RFPL3-201ENST00000249007 ELOA3CA0A087WX78 387 aaPredicted RBP9.5□□□□□ -0.89
RFPL3-201ENST00000249007 A0A1W2PPH5 198 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 ANKRD30BLA7E2S9 258 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 ITGB1BP1O14713 200 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 IFNA17P01571 189 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 ARG1P05089 322 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 HCKP08631 526 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 ELK1P19419 428 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 TNFRSF1BP20333 461 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 GLP1RP43220 463 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 SLC25A1P53007 311 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 ERVFRD-1P60508 538 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 BLOC1S1P78537 153 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 SPIBQ01892 262 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 MXD1Q05195 221 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 PPP1R8Q12972 351 aaKnown RBP9.5□□□□□ -0.89
RFPL3-201ENST00000249007 KLF9Q13886 244 aaPredicted RBP9.5□□□□□ -0.89
RFPL3-201ENST00000249007 HAGHQ16775 308 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 ABCA11PQ4W5N1 156 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 GLYATL3Q5SZD4 288 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 C9orf66Q5T8R8 295 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 LIPKQ5VXJ0 399 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 EIF5AL1Q6IS14 154 aaKnown RBP9.5□□□□□ -0.89
RFPL3-201ENST00000249007 LINC00346Q8IVM7 164 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 OSR2Q8N2R0 312 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 KCNRGQ8N5I3 272 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 C11orf42Q8N5U0 333 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 ZNRF1Q8ND25 227 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 HAVCR2Q8TDQ0 301 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 AKR1E2Q96JD6 320 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 TEAD3Q99594 435 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 AMBNQ9NP70 447 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 ABRACLQ9P1F3 81 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 TMED3Q9Y3Q3 217 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 LRP12Q9Y561 859 aa9.5□□□□□ -0.89
RFPL3-201ENST00000249007 RNF222A6NCQ9 220 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 TRDCB7Z8K6 153 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 GPR31O00270 319 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 GGCTO75223 188 aaKnown RBP9.49□□□□□ -0.89
RFPL3-201ENST00000249007 CD2P06729 351 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 OR8U8P0C7N1 319 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 METTL15P1P0C7V9 234 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 SLC25A4P12235 298 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 OSMP13725 252 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 ANOS1P23352 680 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 GABRA2P47869 451 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 OR12D2P58182 307 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 C9orf152Q5JTZ5 239 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 LDLRAD2Q5SZI1 272 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 SLC18B1Q6NT16 456 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 LPCAT3Q6P1A2 487 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 LYPD4Q6UWN0 246 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 DRAM2Q6UX65 266 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 C18orf65Q6ZTR6 163 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 NRMQ8IXM6 262 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 KLHL30-AS1Q8NEE0 82 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 RFKQ969G6 155 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 SPTSSAQ969W0 71 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 TLNRD1Q9H1K6 362 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 EDA2RQ9HAV5 297 aa9.49□□□□□ -0.89
RFPL3-201ENST00000249007 PSMB11A5LHX3 300 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 OR2AT4A6NND4 320 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 ODF3BA8MYP8 253 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 SEC14L6B5MCN3 397 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 CIDEAO60543 219 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 LY86O95711 162 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 OR4E1P0C645 316 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 CLUP10909 449 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 GNALP38405 381 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 CRYBA2P53672 197 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 RPL31P62899 125 aaKnown RBP9.48□□□□□ -0.89
RFPL3-201ENST00000249007 SELENOWP63302 87 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 IFI44LQ53G44 452 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 CD300LDQ6UXZ3 194 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 C16orf82Q7Z2V1 217 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 CBLN2Q8IUK8 224 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 OR2AJ1Q8NGZ0 328 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 C2CD4CQ8TF44 421 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 SMIM4Q8WVI0 70 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 SLAMF9Q96A28 289 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 TSSK2Q96PF2 358 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 DUX3Q96PT4 197 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 CHST5Q9GZS9 411 aa9.48□□□□□ -0.89
RFPL3-201ENST00000249007 PNRC2Q9NPJ4 139 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms