RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 IL17BQ9UHF5 180 aa10.16□□□□□ -0.78
SEC61A1-201ENST00000243253 MRPS18CQ9Y3D5 142 aaKnown RBP10.16□□□□□ -0.78
SEC61A1-201ENST00000243253 NPIPB11E5RHQ5 1161 aa10.16□□□□□ -0.78
SEC61A1-201ENST00000243253 SIRPB1O00241 398 aa10.16□□□□□ -0.78
SEC61A1-201ENST00000243253 RPS10P46783 165 aaKnown RBP10.16□□□□□ -0.78
SEC61A1-201ENST00000243253 ZNF600Q6ZNG1 722 aa10.16□□□□□ -0.78
SEC61A1-201ENST00000243253 TPRX1Q8N7U7 411 aa10.16□□□□□ -0.78
SEC61A1-201ENST00000243253 KCNE4Q8WWG9 221 aa10.16□□□□□ -0.78
SEC61A1-201ENST00000243253 FRZBQ92765 325 aa10.16□□□□□ -0.78
SEC61A1-201ENST00000243253 GPR146Q96CH1 333 aa10.16□□□□□ -0.78
SEC61A1-201ENST00000243253 SSX3Q99909 188 aa10.16□□□□□ -0.78
SEC61A1-201ENST00000243253 PPP1R3CQ9UQK1 317 aa10.16□□□□□ -0.78
SEC61A1-201ENST00000243253 SMG1Q96Q15 3661 aaKnown RBP10.16□□□□□ -0.78
SEC61A1-201ENST00000243253 TACC2O95359 2948 aa10.16□□□□□ -0.78
SEC61A1-201ENST00000243253 IGKV3D-15A0A087WSY6 115 aa10.15□□□□□ -0.78
SEC61A1-201ENST00000243253 WDR1O75083 606 aa10.15□□□□□ -0.78
SEC61A1-201ENST00000243253 HIST1H1BP16401 226 aaKnown RBP10.15□□□□□ -0.78
SEC61A1-201ENST00000243253 IDH3GP51553 393 aaPredicted RBP10.15□□□□□ -0.78
SEC61A1-201ENST00000243253 CEACAM21Q3KPI0 293 aa10.15□□□□□ -0.78
SEC61A1-201ENST00000243253 WDR5BQ86VZ2 330 aa10.15□□□□□ -0.78
SEC61A1-201ENST00000243253 ZNF695Q8IW36 515 aa10.15□□□□□ -0.78
SEC61A1-201ENST00000243253 H1FOOQ8IZA3 346 aaPredicted RBP10.15□□□□□ -0.78
SEC61A1-201ENST00000243253 PARD6GQ9BYG4 376 aaPredicted RBP10.15□□□□□ -0.78
SEC61A1-201ENST00000243253 TRAV24A0A0B4J272 114 aa10.15□□□□□ -0.78
SEC61A1-201ENST00000243253 WISP2O76076 250 aa10.15□□□□□ -0.78
SEC61A1-201ENST00000243253 IAPPP10997 89 aa10.15□□□□□ -0.78
SEC61A1-201ENST00000243253 F2RP25116 425 aa10.15□□□□□ -0.78
SEC61A1-201ENST00000243253 CEBPDP49716 269 aaPredicted RBP10.15□□□□□ -0.78
SEC61A1-201ENST00000243253 VAMP2P63027 116 aa10.15□□□□□ -0.78
SEC61A1-201ENST00000243253 OR1K1Q8NGR3 316 aa10.15□□□□□ -0.78
SEC61A1-201ENST00000243253 OR2Y1Q8NGV0 311 aa10.15□□□□□ -0.78
SEC61A1-201ENST00000243253 CT55Q8WUE5 264 aa10.15□□□□□ -0.78
SEC61A1-201ENST00000243253 RPRMQ9NS64 109 aa10.15□□□□□ -0.78
SEC61A1-201ENST00000243253 B4DEV8 164 aa10.15□□□□□ -0.79
SEC61A1-201ENST00000243253 CA6P23280 308 aa10.15□□□□□ -0.79
SEC61A1-201ENST00000243253 ARG2P78540 354 aa10.15□□□□□ -0.79
SEC61A1-201ENST00000243253 ZNF808Q8N4W9 903 aaPredicted RBP10.15□□□□□ -0.79
SEC61A1-201ENST00000243253 OR2V1Q8NHB1 315 aa10.15□□□□□ -0.79
SEC61A1-201ENST00000243253 PYGO2Q9BRQ0 406 aa10.15□□□□□ -0.79
SEC61A1-201ENST00000243253 UNKLQ9H9P5 680 aaKnown RBP10.15□□□□□ -0.79
SEC61A1-201ENST00000243253 SDF2L1Q9HCN8 221 aa10.15□□□□□ -0.79
SEC61A1-201ENST00000243253 ARGFXA6NJG6 315 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 GJE1A6NN92 205 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 IGKV1-5P01602 117 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 UBE2KP61086 200 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 HLA-DRB3P79483 266 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 MPV17LQ2QL34 196 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 C4orf17Q53FE4 359 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 WDR25Q64LD2 544 aaPredicted RBP10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 VHLLQ6RSH7 139 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 UNQ6494/PRO21346Q6UXR6 183 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 STX12Q86Y82 276 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 ZNF383Q8NA42 475 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 OTOGLQ3ZCN5 2332 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 TRBV24-1A0A075B6N3 115 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 SYNGR1O43759 233 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 LILRA1O75019 489 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 TRGC1P0CF51 173 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 TESK1Q15569 626 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 ZNF585BQ52M93 769 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 PMS2CLQ68D20 193 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 FAM53AQ6NSI3 398 aaPredicted RBP10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 MED12LQ86YW9 2145 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 ZNF525Q8N782 197 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 C14orf144Q96I85 54 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 SPIN2AQ99865 258 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 SPIN2BQ9BPZ2 258 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 GAR1Q9NY12 217 aaKnown RBP10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 SH3BGRL2Q9UJC5 107 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 PRDX4Q13162 271 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 RFESDQ8TAC1 157 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 GPR61Q9BZJ8 451 aa10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 ZNF552Q9H707 407 aaPredicted RBP10.14□□□□□ -0.79
SEC61A1-201ENST00000243253 ZZEF1O43149 2961 aa10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 SPTBN4Q9H254 2564 aa10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 LYZL6O75951 148 aa10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 NDUFA6P56556 154 aa10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 CPNE4Q96A23 557 aaPredicted RBP10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 RSG1Q9BU20 258 aa10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 FOXJ2Q9P0K8 574 aa10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 PILRBQ9UKJ0 227 aa10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 RELNP78509 3460 aa10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 IGKV1D-33P01593 117 aa10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 IGKV1-33P01594 117 aa10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 P0C879 139 aa10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 MDKP21741 143 aaPredicted RBP10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 SRSF6Q13247 344 aaKnown RBP10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 EIF4EBP1Q13541 118 aaPredicted RBP10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 CMTM1Q8IZ96 169 aa10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 PSMG3Q9BT73 122 aaPredicted RBP10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 LINC00470Q9BZP3 86 aa10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 CYB5BO43169 146 aa10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 TK1P04183 234 aa10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 BCL2P10415 239 aa10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 PCBD1P61457 104 aa10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 ERVS71-1P61550 626 aa10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 TLE4Q04727 773 aa10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 TMEM267Q0VDI3 215 aaPredicted RBP10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 NIPSNAP3BQ9BS92 247 aa10.13□□□□□ -0.79
SEC61A1-201ENST00000243253 AGMATQ9BSE5 352 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms